; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002445 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002445
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF4283 domain-containing protein
Genome locationscaffold318:101567..101802
RNA-Seq ExpressionMS002445
SyntenyMS002445
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044333.1 hypothetical protein E6C27_scaffold46G00570 [Cucumis melo var. makuwa]1.3e-0538.57Show/hide
Query:  HLKFGKMNVASFIEDKMTPSYGRWIRVSNLPVN-WNFVIFHFKGEKCGGYEETTKKTQRRLDLVEVRIKV
        ++KF + N  +    K+ PSYG WI+V  +P++ WN   F   G+ CGG+ E  K+T+   DL+E  I+V
Subjt:  HLKFGKMNVASFIEDKMTPSYGRWIRVSNLPVN-WNFVIFHFKGEKCGGYEETTKKTQRRLDLVEVRIKV

KAA0050054.1 hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa]2.9e-0535.71Show/hide
Query:  HLKFGKMNVASFIEDKMTPSYGRWIRVSNLPVN-WNFVIFHFKGEKCGGYEETTKKTQRRLDLVEVRIKV
        ++KF + N  +    K+ PSYG WI+V  +P++ WN   F   G+ CGG+ E  K+T+   D++E  I++
Subjt:  HLKFGKMNVASFIEDKMTPSYGRWIRVSNLPVN-WNFVIFHFKGEKCGGYEETTKKTQRRLDLVEVRIKV

QWT43305.1 kinesin-related protein KIN7C [Citrullus lanatus subsp. vulgaris]4.8e-0843.04Show/hide
Query:  EAINDHLKFGKMNVASFIEDKMTPSYGRWIRVSNLPVN-WNFVIFHFKGEKCGGYEETTKKTQRRLDLVEVRIKVMQRK
        E +ND L     N+    ED   PSYG WI++ NL ++ W++  F   GE CGGY ET+KKT  R+D++E  +KV   K
Subjt:  EAINDHLKFGKMNVASFIEDKMTPSYGRWIRVSNLPVN-WNFVIFHFKGEKCGGYEETTKKTQRRLDLVEVRIKVMQRK

TYK04254.1 mitotic spindle checkpoint protein mad1 [Cucumis melo var. makuwa]3.8e-0539.71Show/hide
Query:  KFGKMNVASFIEDKMTPSYGRWIRVSNLPVN-WNFVIFHFKGEKCGGYEETTKKTQRRLDLVEVRIKV
        KF   +     + K+ PSYG WIRV  +P++ WN ++F   GE CGG+ E   +T  + +L E  IKV
Subjt:  KFGKMNVASFIEDKMTPSYGRWIRVSNLPVN-WNFVIFHFKGEKCGGYEETTKKTQRRLDLVEVRIKV

TYK10355.1 hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa]2.9e-0535.71Show/hide
Query:  HLKFGKMNVASFIEDKMTPSYGRWIRVSNLPVN-WNFVIFHFKGEKCGGYEETTKKTQRRLDLVEVRIKV
        ++KF + N  +    K+ PSYG WI+V  +P++ WN   F   G+ CGG+ E  K+T+   D++E  I++
Subjt:  HLKFGKMNVASFIEDKMTPSYGRWIRVSNLPVN-WNFVIFHFKGEKCGGYEETTKKTQRRLDLVEVRIKV

TrEMBL top hitse value%identityAlignment
A0A5A7TLE2 DUF4283 domain-containing protein6.3e-0638.57Show/hide
Query:  HLKFGKMNVASFIEDKMTPSYGRWIRVSNLPVN-WNFVIFHFKGEKCGGYEETTKKTQRRLDLVEVRIKV
        ++KF + N  +    K+ PSYG WI+V  +P++ WN   F   G+ CGG+ E  K+T+   DL+E  I+V
Subjt:  HLKFGKMNVASFIEDKMTPSYGRWIRVSNLPVN-WNFVIFHFKGEKCGGYEETTKKTQRRLDLVEVRIKV

A0A5A7U495 DUF4283 domain-containing protein1.4e-0535.71Show/hide
Query:  HLKFGKMNVASFIEDKMTPSYGRWIRVSNLPVN-WNFVIFHFKGEKCGGYEETTKKTQRRLDLVEVRIKV
        ++KF + N  +    K+ PSYG WI+V  +P++ WN   F   G+ CGG+ E  K+T+   D++E  I++
Subjt:  HLKFGKMNVASFIEDKMTPSYGRWIRVSNLPVN-WNFVIFHFKGEKCGGYEETTKKTQRRLDLVEVRIKV

A0A5D3BZ56 Mitotic spindle checkpoint protein mad11.8e-0539.71Show/hide
Query:  KFGKMNVASFIEDKMTPSYGRWIRVSNLPVN-WNFVIFHFKGEKCGGYEETTKKTQRRLDLVEVRIKV
        KF   +     + K+ PSYG WIRV  +P++ WN ++F   GE CGG+ E   +T  + +L E  IKV
Subjt:  KFGKMNVASFIEDKMTPSYGRWIRVSNLPVN-WNFVIFHFKGEKCGGYEETTKKTQRRLDLVEVRIKV

A0A5D3C3G6 Cleavage and polyadenylation specificity factor subunit 15.3e-0534.29Show/hide
Query:  HLKFGKMNVASFIEDKMTPSYGRWIRVSNLPVN-WNFVIFHFKGEKCGGYEETTKKTQRRLDLVEVRIKV
        ++KF + N  +    K+ PSYG WI+V  +P++ WN   F   G+ CGGY +  ++T+   +L+E  I++
Subjt:  HLKFGKMNVASFIEDKMTPSYGRWIRVSNLPVN-WNFVIFHFKGEKCGGYEETTKKTQRRLDLVEVRIKV

A0A5D3CFS8 DUF4283 domain-containing protein1.4e-0535.71Show/hide
Query:  HLKFGKMNVASFIEDKMTPSYGRWIRVSNLPVN-WNFVIFHFKGEKCGGYEETTKKTQRRLDLVEVRIKV
        ++KF + N  +    K+ PSYG WI+V  +P++ WN   F   G+ CGG+ E  K+T+   D++E  I++
Subjt:  HLKFGKMNVASFIEDKMTPSYGRWIRVSNLPVN-WNFVIFHFKGEKCGGYEETTKKTQRRLDLVEVRIKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGGCCATAAATGACCACCTGAAATTTGGCAAGATGAATGTGGCTAGTTTCATTGAGGACAAGATGACACCCTCCTATGGAAGATGGATAAGAGTCTCCAATCTCCCAGT
TAATTGGAACTTTGTAATCTTTCACTTCAAAGGTGAGAAATGTGGAGGCTATGAAGAAACAACAAAGAAGACACAAAGAAGACTCGATCTCGTGGAGGTAAGGATCAAAG
TGATGCAGCGTAAG
mRNA sequenceShow/hide mRNA sequence
GAGGCCATAAATGACCACCTGAAATTTGGCAAGATGAATGTGGCTAGTTTCATTGAGGACAAGATGACACCCTCCTATGGAAGATGGATAAGAGTCTCCAATCTCCCAGT
TAATTGGAACTTTGTAATCTTTCACTTCAAAGGTGAGAAATGTGGAGGCTATGAAGAAACAACAAAGAAGACACAAAGAAGACTCGATCTCGTGGAGGTAAGGATCAAAG
TGATGCAGCGTAAG
Protein sequenceShow/hide protein sequence
EAINDHLKFGKMNVASFIEDKMTPSYGRWIRVSNLPVNWNFVIFHFKGEKCGGYEETTKKTQRRLDLVEVRIKVMQRK