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MS002479 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002479
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold318:474310..474555
RNA-Seq ExpressionMS002479
SyntenyMS002479
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE7997949.1 hypothetical protein FH972_002535 [Carpinus fangiana]4.7e-1448.78Show/hide
Query:  MGGLKKLLILVALVVLVCSSTTTARSTWPDKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF
        +G  K   +++AL +  CSS           W V +VNGLS G TLF+HCKS+DNDLG+HNL VG +F W+F  N+W TTL+
Subjt:  MGGLKKLLILVALVVLVCSSTTTARSTWPDKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF

XP_022143641.1 S-protein homolog 1-like [Momordica charantia]1.2e-3080.49Show/hide
Query:  MGGLKKLLILVALVVLVCSSTTTARSTWPDKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF
        M G KKLLILVA+ VLVCSSTTTA STWP+KWRVD+VNGLSSGQTLF+HCKSKD+DLG+HNL VG +FGWNF DN+W TTLF
Subjt:  MGGLKKLLILVALVVLVCSSTTTARSTWPDKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF

XP_022143694.1 S-protein homolog 1-like [Momordica charantia]1.3e-1658.62Show/hide
Query:  MGGLKK---LLILVALVVLVCSSTTTARSTWPD--KWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF
        MG LK+    +I+VALV+L CS  T A S WP    W V++VN L+S QTLFVHC+SKD+DLG HN+ VGTQ+ + F+DNIW TTLF
Subjt:  MGGLKK---LLILVALVVLVCSSTTTARSTWPD--KWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF

XP_022143772.1 S-protein homolog 74-like [Momordica charantia]7.2e-1556.41Show/hide
Query:  KKLLILVALVVLVCSSTTTARSTWPDKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF
        K  L+ + ++ LV      A S    KW++ VVNGLS+GQTLFVHCKSKDNDLG HNL  GT+F W F  N+W TTLF
Subjt:  KKLLILVALVVLVCSSTTTARSTWPDKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF

XP_022152463.1 S-protein homolog 1-like [Momordica charantia]2.8e-1961.63Show/hide
Query:  MGGLKK---LLILVALVVLVCSSTTTARSTWP-DKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF
        MGG+KK    +I+VALV+L CS  T A +TWP   W VD+VN LS+GQ LFVHCKSKD+DLG HNL  G Q+G+ F+DN+W+TTLF
Subjt:  MGGLKK---LLILVALVVLVCSSTTTARSTWP-DKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF

TrEMBL top hitse value%identityAlignment
A0A5N6QH19 S-protein homolog2.3e-1448.78Show/hide
Query:  MGGLKKLLILVALVVLVCSSTTTARSTWPDKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF
        +G  K   +++AL +  CSS           W V +VNGLS G TLF+HCKS+DNDLG+HNL VG +F W+F  N+W TTL+
Subjt:  MGGLKKLLILVALVVLVCSSTTTARSTWPDKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF

A0A6J1CQ33 S-protein homolog6.4e-1758.62Show/hide
Query:  MGGLKK---LLILVALVVLVCSSTTTARSTWPD--KWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF
        MG LK+    +I+VALV+L CS  T A S WP    W V++VN L+S QTLFVHC+SKD+DLG HN+ VGTQ+ + F+DNIW TTLF
Subjt:  MGGLKK---LLILVALVVLVCSSTTTARSTWPD--KWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF

A0A6J1CQW3 S-protein homolog6.0e-3180.49Show/hide
Query:  MGGLKKLLILVALVVLVCSSTTTARSTWPDKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF
        M G KKLLILVA+ VLVCSSTTTA STWP+KWRVD+VNGLSSGQTLF+HCKSKD+DLG+HNL VG +FGWNF DN+W TTLF
Subjt:  MGGLKKLLILVALVVLVCSSTTTARSTWPDKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF

A0A6J1CRU0 S-protein homolog3.5e-1556.41Show/hide
Query:  KKLLILVALVVLVCSSTTTARSTWPDKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF
        K  L+ + ++ LV      A S    KW++ VVNGLS+GQTLFVHCKSKDNDLG HNL  GT+F W F  N+W TTLF
Subjt:  KKLLILVALVVLVCSSTTTARSTWPDKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF

A0A6J1DEX4 S-protein homolog1.4e-1961.63Show/hide
Query:  MGGLKK---LLILVALVVLVCSSTTTARSTWP-DKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF
        MGG+KK    +I+VALV+L CS  T A +TWP   W VD+VN LS+GQ LFVHCKSKD+DLG HNL  G Q+G+ F+DN+W+TTLF
Subjt:  MGGLKK---LLILVALVVLVCSSTTTARSTWP-DKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF

SwissProt top hitse value%identityAlignment
F4JLS0 S-protein homolog 13.9e-1140.66Show/hide
Query:  MGGLKKLLILVAL-VVLVC------SSTTTARSTWP--DKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF
        M  +K+ L+ +   + L C        TTT     P   +W+V VVNGL++G+TLF+HCKSK++DLG  NL    +F WNF +N+  +T F
Subjt:  MGGLKKLLILVAL-VVLVC------SSTTTARSTWP--DKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF

O23020 S-protein homolog 52.9e-0641.07Show/hide
Query:  PDKWRVDVV--NGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF
        P  WR  VV    L  G  L +HCKSK +DLG+H +    ++ + F+ N+W++TLF
Subjt:  PDKWRVDVV--NGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF

P0DN92 S-protein homolog 243.5e-0431.65Show/hide
Query:  LILVALVVLVCSSTTTARSTWP----DKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF
        ++ + ++ L+CS     +           RV + N   +   L +HCKS+D+DLG H L  G  FGW F  N   +TL+
Subjt:  LILVALVVLVCSSTTTARSTWP----DKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF

P0DN93 S-protein homolog 291.6e-0432.93Show/hide
Query:  MGGLKKLLILVALVVLVCSSTTTARSTWPDKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF
        M    K+ +++++++    S+    + +  K  V V N +S   TL + C+SKD+DLG H L  G  F W F  + + TTLF
Subjt:  MGGLKKLLILVALVVLVCSSTTTARSTWPDKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF

Q2HQ46 S-protein homolog 743.5e-1240.66Show/hide
Query:  MGGLKKLLILVAL-VVLVCSSTTTARSTWP--------DKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF
        M  +K+ ++ +   +VL C     AR T           +W+V V NGL++G+TLF+HCKSK+NDLG  NL    +F WNF +N+  +TLF
Subjt:  MGGLKKLLILVAL-VVLVCSSTTTARSTWP--------DKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family2.0e-0741.07Show/hide
Query:  PDKWRVDVV--NGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF
        P  WR  VV    L  G  L +HCKSK +DLG+H +    ++ + F+ N+W++TLF
Subjt:  PDKWRVDVV--NGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF

AT2G06090.1 Plant self-incompatibility protein S1 family3.8e-0636.14Show/hide
Query:  MGGLKKLLILVALVVLVCSSTTTARSTWPDKWRVDVVNGLSSG-QTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF
        M  L  LLI++AL V     +      WP K ++   N  S     L VHCKSKD+DLG+H +    ++ + FED+++  T F
Subjt:  MGGLKKLLILVALVVLVCSSTTTARSTWPDKWRVDVVNGLSSG-QTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF

AT4G16295.1 S-protein homologue 12.7e-1240.66Show/hide
Query:  MGGLKKLLILVAL-VVLVC------SSTTTARSTWP--DKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF
        M  +K+ L+ +   + L C        TTT     P   +W+V VVNGL++G+TLF+HCKSK++DLG  NL    +F WNF +N+  +T F
Subjt:  MGGLKKLLILVAL-VVLVC------SSTTTARSTWP--DKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF

AT4G29035.1 Plant self-incompatibility protein S1 family2.5e-1340.66Show/hide
Query:  MGGLKKLLILVAL-VVLVCSSTTTARSTWP--------DKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF
        M  +K+ ++ +   +VL C     AR T           +W+V V NGL++G+TLF+HCKSK+NDLG  NL    +F WNF +N+  +TLF
Subjt:  MGGLKKLLILVAL-VVLVCSSTTTARSTWP--------DKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF

AT5G04350.1 Plant self-incompatibility protein S1 family4.1e-0837.33Show/hide
Query:  LILVALVVLVCSSTTTARSTWPDKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF
        L + ++V+ +C   + A     +  +V + N L   + L VHC+SKD+DLG H L +G  + + F DNIW+TT F
Subjt:  LILVALVVLVCSSTTTARSTWPDKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGTCTCAAAAAGCTTTTGATTTTGGTGGCTTTGGTCGTGCTTGTTTGTTCCTCCACAACAACTGCAAGGTCAACATGGCCAGACAAATGGCGTGTGGACGTCGT
CAATGGGTTGAGCAGCGGACAGACACTGTTCGTACATTGTAAGTCCAAAGACAATGATTTGGGAATGCACAACCTTGGTGTCGGAACTCAATTCGGTTGGAATTTTGAAG
ACAACATTTGGGAAACCACACTATTC
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGTCTCAAAAAGCTTTTGATTTTGGTGGCTTTGGTCGTGCTTGTTTGTTCCTCCACAACAACTGCAAGGTCAACATGGCCAGACAAATGGCGTGTGGACGTCGT
CAATGGGTTGAGCAGCGGACAGACACTGTTCGTACATTGTAAGTCCAAAGACAATGATTTGGGAATGCACAACCTTGGTGTCGGAACTCAATTCGGTTGGAATTTTGAAG
ACAACATTTGGGAAACCACACTATTC
Protein sequenceShow/hide protein sequence
MGGLKKLLILVALVVLVCSSTTTARSTWPDKWRVDVVNGLSSGQTLFVHCKSKDNDLGMHNLGVGTQFGWNFEDNIWETTLF