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MS002480 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002480
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold318:477620..477961
RNA-Seq ExpressionMS002480
SyntenyMS002480
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004292390.1 PREDICTED: uncharacterized protein LOC101314627 [Fragaria vesca subsp. vesca]5.7e-4266.67Show/hide
Query:  KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIK
        KW V +VNGLSS +TLF+HCKSKDDDLGIHNLAVG +  W+FR+N  GTTLFWCYMR      ASF+V+W++    +WL   CNW+DCIWTA+DDGIYIK
Subjt:  KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIK

Query:  NILGNKDELAHKWG
        NI  N DEL HKWG
Subjt:  NILGNKDELAHKWG

XP_022143641.1 S-protein homolog 1-like [Momordica charantia]1.1e-6699.12Show/hide
Query:  KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIK
        KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKP+NANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIK
Subjt:  KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIK

Query:  NILGNKDELAHKWG
        NILGNKDELAHKWG
Subjt:  NILGNKDELAHKWG

XP_022143694.1 S-protein homolog 1-like [Momordica charantia]1.1e-4265.18Show/hide
Query:  WRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKN
        W V+IVN L+S QTLF+HC+SKDDDLG HN++VG ++ + F+DN+WGTTLFWCY+RKPNN++A F+VYW D  K  WLY  CNW+ CIW AKDDGIYIK+
Subjt:  WRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKN

Query:  ILGNKDELAHKW
        I  N+D+L HKW
Subjt:  ILGNKDELAHKW

XP_022152463.1 S-protein homolog 1-like [Momordica charantia]1.6e-4166.07Show/hide
Query:  WRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKN
        W VDIVN LS+GQ LF+HCKSKDDDLG HNL  GA++G+ F+DN+W TTLFWCY+RKP+N++A+F+VYW D SK  WLY  C++++CIW AK DGIYIKN
Subjt:  WRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKN

Query:  ILGNKDELAHKW
        I  N+DEL H W
Subjt:  ILGNKDELAHKW

XP_024200376.1 S-protein homolog 74 [Rosa chinensis]3.4e-3961.95Show/hide
Query:  WRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKN
        W V IVNGLSSG+ LF+HCKSKD+DLGIHNLAVG +  W+F++N  GTTLFWCY+R      A F+V+W + ++ +WL   CNW+DCIWTA+DDG+YIKN
Subjt:  WRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKN

Query:  ILGNKDELAHKWG
        I  N DEL H+WG
Subjt:  ILGNKDELAHKWG

TrEMBL top hitse value%identityAlignment
A0A2P6QC93 S-protein homolog1.7e-3961.95Show/hide
Query:  WRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKN
        W V IVNGLSSG+ LF+HCKSKD+DLGIHNLAVG +  W+F++N  GTTLFWCY+R      A F+V+W + ++ +WL   CNW+DCIWTA+DDG+YIKN
Subjt:  WRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKN

Query:  ILGNKDELAHKWG
        I  N DEL H+WG
Subjt:  ILGNKDELAHKWG

A0A6J1CQ33 S-protein homolog5.5e-4365.18Show/hide
Query:  WRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKN
        W V+IVN L+S QTLF+HC+SKDDDLG HN++VG ++ + F+DN+WGTTLFWCY+RKPNN++A F+VYW D  K  WLY  CNW+ CIW AKDDGIYIK+
Subjt:  WRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKN

Query:  ILGNKDELAHKW
        I  N+D+L HKW
Subjt:  ILGNKDELAHKW

A0A6J1CQW3 S-protein homolog5.5e-6799.12Show/hide
Query:  KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIK
        KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKP+NANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIK
Subjt:  KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIK

Query:  NILGNKDELAHKWG
        NILGNKDELAHKWG
Subjt:  NILGNKDELAHKWG

A0A6J1DEX4 S-protein homolog8.0e-4266.07Show/hide
Query:  WRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKN
        W VDIVN LS+GQ LF+HCKSKDDDLG HNL  GA++G+ F+DN+W TTLFWCY+RKP+N++A+F+VYW D SK  WLY  C++++CIW AK DGIYIKN
Subjt:  WRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKN

Query:  ILGNKDELAHKW
        I  N+DEL H W
Subjt:  ILGNKDELAHKW

A0A6J1L199 S-protein homolog2.8e-3961.95Show/hide
Query:  KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIK
        +W V +VNGL  GQTL  HCKSK+DDLG HNLA GA F + F+DN+W TT FWC + KPNNA+ASF+VYW D SK+QWLY  C    C+W  KDDG+YIK
Subjt:  KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIK

Query:  NILGNKDELAHKW
        N   N+DEL H W
Subjt:  NILGNKDELAHKW

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 61.8e-1133.67Show/hide
Query:  LFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKW
        L +HCKS+DDD G H L  G  +GW F  N   +TL++C   +       F++Y       + + +     +C W AK+DGIY    +  K+ L +KW
Subjt:  LFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELAHKW

F4JLQ5 S-protein homolog 21.8e-1133.63Show/hide
Query:  KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIK
        K  V+I N L +  TL  HCKSKDDDLG   L  G  + ++F    +G TL++C    PN ++ SF++Y D   ++    N C  + C+W  + +G    
Subjt:  KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIK

Query:  NILGNKDELAHKW
        N    + +L + W
Subjt:  NILGNKDELAHKW

F4JLS0 S-protein homolog 11.4e-3049.56Show/hide
Query:  KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIK
        +W+V +VNGL++G+TLFIHCKSK+DDLG  NL    +F WNF +N+  +T FWCYM K +N + +  V+WDD      L++ C W++CIWTAK DG+Y+ 
Subjt:  KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIK

Query:  NILGNKDELAHKW
        N    +D L+ KW
Subjt:  NILGNKDELAHKW

P0DN92 S-protein homolog 241.4e-1139.58Show/hide
Query:  RVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIY
        RV I N   +   L IHCKS+DDDLG H LA G  FGW F  N   +TL++C   +       FE+Y  ++       +F    +C W A+ DGIY
Subjt:  RVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIY

Q2HQ46 S-protein homolog 745.7e-2946.9Show/hide
Query:  KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIK
        +W+V + NGL++G+TLFIHCKSK++DLG  NL    +F WNF +N+  +TLFWCYM K ++ + + +V+WDD      L++ C+W++C+WTAK+DG+Y+ 
Subjt:  KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIK

Query:  NILGNKDELAHKW
        N    +D L+ KW
Subjt:  NILGNKDELAHKW

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family5.0e-1239.08Show/hide
Query:  WRVDIV--NGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWE
        WR  +V    L  G  L IHCKSK DDLGIH +    ++ + F+ NLW +TLF+C  +  +    SF++Y  D  ++Q + + C WE
Subjt:  WRVDIV--NGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWE

AT4G16195.1 Plant self-incompatibility protein S1 family1.3e-1233.63Show/hide
Query:  KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIK
        K  V+I N L +  TL  HCKSKDDDLG   L  G  + ++F    +G TL++C    PN ++ SF++Y D   ++    N C  + C+W  + +G    
Subjt:  KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIK

Query:  NILGNKDELAHKW
        N    + +L + W
Subjt:  NILGNKDELAHKW

AT4G16295.1 S-protein homologue 19.7e-3249.56Show/hide
Query:  KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIK
        +W+V +VNGL++G+TLFIHCKSK+DDLG  NL    +F WNF +N+  +T FWCYM K +N + +  V+WDD      L++ C W++CIWTAK DG+Y+ 
Subjt:  KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIK

Query:  NILGNKDELAHKW
        N    +D L+ KW
Subjt:  NILGNKDELAHKW

AT4G29035.1 Plant self-incompatibility protein S1 family4.1e-3046.9Show/hide
Query:  KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIK
        +W+V + NGL++G+TLFIHCKSK++DLG  NL    +F WNF +N+  +TLFWCYM K ++ + + +V+WDD      L++ C+W++C+WTAK+DG+Y+ 
Subjt:  KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIK

Query:  NILGNKDELAHKW
        N    +D L+ KW
Subjt:  NILGNKDELAHKW

AT5G12060.1 Plant self-incompatibility protein S1 family6.5e-1238.71Show/hide
Query:  VDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDG
        V I N L  G TL +HCKS DDDLG+  LA    + + FR ++ GTTLF+C+   P  +   F++Y DD+   +   +  N   CIW     G
Subjt:  VDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAATGGCGTGTGGACATCGTCAATGGGTTGAGCAGCGGACAGACACTGTTCATACATTGTAAGTCCAAAGACGATGATTTGGGAATACACAACCTTGCGGTCGGAGCTAA
GTTTGGTTGGAACTTCAGAGACAATCTTTGGGGAACAACATTGTTCTGGTGTTACATGCGCAAACCGAACAATGCTAATGCTTCTTTTGAAGTATATTGGGATGACAAGA
GTAAAGAACAATGGCTATATAATTTTTGCAATTGGGAGGATTGCATTTGGACCGCCAAAGATGATGGAATTTATATAAAAAATATCCTTGGGAATAAGGACGAGCTAGCT
CACAAATGGGGA
mRNA sequenceShow/hide mRNA sequence
AAATGGCGTGTGGACATCGTCAATGGGTTGAGCAGCGGACAGACACTGTTCATACATTGTAAGTCCAAAGACGATGATTTGGGAATACACAACCTTGCGGTCGGAGCTAA
GTTTGGTTGGAACTTCAGAGACAATCTTTGGGGAACAACATTGTTCTGGTGTTACATGCGCAAACCGAACAATGCTAATGCTTCTTTTGAAGTATATTGGGATGACAAGA
GTAAAGAACAATGGCTATATAATTTTTGCAATTGGGAGGATTGCATTTGGACCGCCAAAGATGATGGAATTTATATAAAAAATATCCTTGGGAATAAGGACGAGCTAGCT
CACAAATGGGGA
Protein sequenceShow/hide protein sequence
KWRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLAVGAKFGWNFRDNLWGTTLFWCYMRKPNNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAKDDGIYIKNILGNKDELA
HKWG