; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002483 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002483
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold318:488657..489097
RNA-Seq ExpressionMS002483
SyntenyMS002483
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592857.1 S-protein-like 1, partial [Cucurbita argyrosperma subsp. sororia]1.4e-4557.14Show/hide
Query:  MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFD
        MG L+ PL  MIV  L L+  ST+   +WP   TW V + N L   QTL  HC+SK+DD+G+ NI+ G  YSF FKDN+W TT FWC + KPNNAHA FD
Subjt:  MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFD

Query:  VYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE
        VYW D SK  WLYTRC   TC+WI KDDG+YIK+   NQD+L+H WE
Subjt:  VYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE

XP_022143641.1 S-protein homolog 1-like [Momordica charantia]8.3e-4660.28Show/hide
Query:  PLGFMIVVALVLLHCSTLVS-SAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVD
        P   +I+VA+VL+  ST  + S WP+   W V+I N L+S QTLF+HC+SKDDDLG HN++VG ++ + F+DN+WGTTLFWCYMRKP+NA+A F+VYW D
Subjt:  PLGFMIVVALVLLHCSTLVS-SAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVD

Query:  NSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKW
         SK  WLY  CNW+ CIW AKDDGIYIK+I  N+D+L HKW
Subjt:  NSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKW

XP_022143694.1 S-protein homolog 1-like [Momordica charantia]1.8e-8596.6Show/hide
Query:  MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFD
        MGCLKEPLGFMIVVALVLLHCSTL SSAWPSWPTWHVNI NELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCY+RKPNN+HADFD
Subjt:  MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFD

Query:  VYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE
        VYWVDN KGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE
Subjt:  VYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE

XP_022152463.1 S-protein homolog 1-like [Momordica charantia]3.0e-5970.07Show/hide
Query:  MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFD
        MG +K+PLGF+IVVALVLL CST+  + WP  PTW V+I NEL++ Q LFVHC+SKDDDLGEHN+  G QY F FKDN+W TTLFWCY+RKP+N+HA FD
Subjt:  MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFD

Query:  VYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE
        VYW D SKG+WLYTRC++K CIWIAK DGIYIK+IP NQD+L+H WE
Subjt:  VYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE

XP_023514776.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]1.9e-4557.14Show/hide
Query:  MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFD
        MG  + PL  MIV  L L+  ST+   +WP   TW V + N L   QTL  HC+SK+DDLG+ NI+ G  YSF FKDN+W TT FWC + KPNNAHA FD
Subjt:  MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFD

Query:  VYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE
        VYW D SK  WLYTRC   TC+WI KDDG+YIK+   NQD+L+H WE
Subjt:  VYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE

TrEMBL top hitse value%identityAlignment
A0A6J1CQ33 S-protein homolog8.9e-8696.6Show/hide
Query:  MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFD
        MGCLKEPLGFMIVVALVLLHCSTL SSAWPSWPTWHVNI NELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCY+RKPNN+HADFD
Subjt:  MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFD

Query:  VYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE
        VYWVDN KGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE
Subjt:  VYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE

A0A6J1CQW3 S-protein homolog4.0e-4660.28Show/hide
Query:  PLGFMIVVALVLLHCSTLVS-SAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVD
        P   +I+VA+VL+  ST  + S WP+   W V+I N L+S QTLF+HC+SKDDDLG HN++VG ++ + F+DN+WGTTLFWCYMRKP+NA+A F+VYW D
Subjt:  PLGFMIVVALVLLHCSTLVS-SAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVD

Query:  NSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKW
         SK  WLY  CNW+ CIW AKDDGIYIK+I  N+D+L HKW
Subjt:  NSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKW

A0A6J1DEX4 S-protein homolog1.4e-5970.07Show/hide
Query:  MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFD
        MG +K+PLGF+IVVALVLL CST+  + WP  PTW V+I NEL++ Q LFVHC+SKDDDLGEHN+  G QY F FKDN+W TTLFWCY+RKP+N+HA FD
Subjt:  MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFD

Query:  VYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE
        VYW D SKG+WLYTRC++K CIWIAK DGIYIK+IP NQD+L+H WE
Subjt:  VYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE

A0A6J1H5A3 S-protein homolog5.8e-4556.46Show/hide
Query:  MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFD
        MG L+  L  MIV  L L+  ST+   +WP   TW V + N L   QTL  HC+SK+DD+G+ NI+ G  YSF FKDN+W TT FWC + KPNNAHA FD
Subjt:  MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFD

Query:  VYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE
        VYW D SK  WLYTRC   TC+WI KDDG+YIK+   NQD+L+H WE
Subjt:  VYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE

A0A6J1L199 S-protein homolog9.9e-4555.78Show/hide
Query:  MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFD
        MG L+  L  MIV  L L+  ST+   +WP    W V + N L   QTL  HC+SK+DDLG+HN++ G  +SF FKDN+W TT FWC + KPNNAHA FD
Subjt:  MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFD

Query:  VYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE
        VYW D SK  WLYTRC   TC+WI KDDG+YIK+   NQD+L+H WE
Subjt:  VYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 29.7e-1333.64Show/hide
Query:  VNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIP
        V I N+L ++ TL  HC+SKDDDLG   +  G  +SF+F    +G TL++C    PN +H+ FD+Y      G     +C    C+W  + +G    +  
Subjt:  VNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIP

Query:  VNQDQLIHKW
          Q  L + W
Subjt:  VNQDQLIHKW

F4JLS0 S-protein homolog 11.3e-2539.22Show/hide
Query:  MGCLKE-PLGFMIVVAL-----VLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNN
        M C+K+  L     +AL     VL+  +T      P    W V + N L + +TLF+HC+SK+DDLGE N+    ++S+ F +N+  +T FWCYM K +N
Subjt:  MGCLKE-PLGFMIVVAL-----VLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNN

Query:  AHADFDVYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE
         H + +V+W D      L+ RC WK CIW AK DG+Y+ +    +D L  KWE
Subjt:  AHADFDVYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE

P0DN94 S-protein homolog 171.4e-1137.25Show/hide
Query:  VNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRK-PNNAH----ADFDVYWVDNSKGYWLYTRCNWKTCIWIAKDDGIY
        + IANEL  ++ L++ C SKDD LG H I +G  +   F  N WGTT F C +R+ PN  H      F ++ +++  G W           W A++DGIY
Subjt:  VNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRK-PNNAH----ADFDVYWVDNSKGYWLYTRCNWKTCIWIAKDDGIY

Query:  IK
        +K
Subjt:  IK

Q2HQ46 S-protein homolog 748.4e-2538.93Show/hide
Query:  VLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYTRC
        VL   +T      P    W V +AN L + +TLF+HC+SK++DLG+ N+    ++S+ F +N+  +TLFWCYM K ++ H +  V+W D      L+ RC
Subjt:  VLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYTRC

Query:  NWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE
        +WK C+W AK+DG+Y+ +  + +D L  KW+
Subjt:  NWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE

Q9LVX2 S-protein homolog 316.9e-1139Show/hide
Query:  VNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMR-KPNNAH-ADFDVYWVDNSKGYWLYTR-CNWKTCIWIAKDDGIYIK
        + I NEL S + L++ C SK+D +G   I VG  Y  +F+ NIWGTT F C ++ +PN  H  +F  +     K Y  Y    +W    W A++DGIY+K
Subjt:  VNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMR-KPNNAH-ADFDVYWVDNSKGYWLYTR-CNWKTCIWIAKDDGIYIK

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family6.9e-1433.64Show/hide
Query:  VNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIP
        V I N+L ++ TL  HC+SKDDDLG   +  G  +SF+F    +G TL++C    PN +H+ FD+Y      G     +C    C+W  + +G    +  
Subjt:  VNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIP

Query:  VNQDQLIHKW
          Q  L + W
Subjt:  VNQDQLIHKW

AT4G16295.1 S-protein homologue 19.2e-2739.22Show/hide
Query:  MGCLKE-PLGFMIVVAL-----VLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNN
        M C+K+  L     +AL     VL+  +T      P    W V + N L + +TLF+HC+SK+DDLGE N+    ++S+ F +N+  +T FWCYM K +N
Subjt:  MGCLKE-PLGFMIVVAL-----VLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNN

Query:  AHADFDVYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE
         H + +V+W D      L+ RC WK CIW AK DG+Y+ +    +D L  KWE
Subjt:  AHADFDVYWVDNSKGYWLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE

AT4G29035.1 Plant self-incompatibility protein S1 family6.0e-2638.93Show/hide
Query:  VLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYTRC
        VL   +T      P    W V +AN L + +TLF+HC+SK++DLG+ N+    ++S+ F +N+  +TLFWCYM K ++ H +  V+W D      L+ RC
Subjt:  VLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGYWLYTRC

Query:  NWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE
        +WK C+W AK+DG+Y+ +  + +D L  KW+
Subjt:  NWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE

AT5G04347.1 Plant self-incompatibility protein S1 family1.4e-1438.26Show/hide
Query:  IANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRK-PN-NAHADFDVYWVDNSKGYWLYTRCNWKTCI-----WIAKDDGIY
        + NELN+ + L V C+SKDD+LG+H + VG      F DN+W  TLFWC + K P+   H  FD Y            R  WK  I     WIA++DGIY
Subjt:  IANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRK-PN-NAHADFDVYWVDNSKGYWLYTRCNWKTCI-----WIAKDDGIY

Query:  IKDIPVNQDQLIHKW
            P    +  + W
Subjt:  IKDIPVNQDQLIHKW

AT5G04350.1 Plant self-incompatibility protein S1 family2.5e-1641.13Show/hide
Query:  FMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYM-RKPN-NAHADFDVYWVDNS
        F IV+ L +      VS+A+       V ++N+L   + L VHC+SKDDDLGEH + +G  Y F F DNIW TT F C M + PN   H DF  Y    S
Subjt:  FMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYM-RKPN-NAHADFDVYWVDNS

Query:  KGYWLYTRCNWKTCIWIAKDDGIY
        K           +C WI ++DGIY
Subjt:  KGYWLYTRCNWKTCIWIAKDDGIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTGTCTCAAAGAGCCATTAGGGTTCATGATTGTGGTGGCTTTGGTCCTTCTTCATTGCTCCACCTTAGTTTCGTCGGCGTGGCCGAGTTGGCCAACATGGCATGT
TAATATCGCCAACGAGCTGAATAGCGAACAAACGCTATTCGTGCACTGTCAATCGAAGGATGATGATTTGGGAGAGCACAATATCAGTGTTGGAACTCAATACAGTTTTG
CTTTTAAAGACAATATCTGGGGCACTACACTTTTCTGGTGTTACATGCGCAAGCCAAACAATGCTCATGCTGATTTTGATGTGTATTGGGTTGACAACAGTAAAGGTTAT
TGGCTTTATACCAGATGCAATTGGAAAACTTGTATTTGGATTGCCAAAGACGATGGAATTTACATAAAAGATATTCCTGTGAATCAAGATCAGCTTATTCATAAGTGGGA
G
mRNA sequenceShow/hide mRNA sequence
ATGGGGTGTCTCAAAGAGCCATTAGGGTTCATGATTGTGGTGGCTTTGGTCCTTCTTCATTGCTCCACCTTAGTTTCGTCGGCGTGGCCGAGTTGGCCAACATGGCATGT
TAATATCGCCAACGAGCTGAATAGCGAACAAACGCTATTCGTGCACTGTCAATCGAAGGATGATGATTTGGGAGAGCACAATATCAGTGTTGGAACTCAATACAGTTTTG
CTTTTAAAGACAATATCTGGGGCACTACACTTTTCTGGTGTTACATGCGCAAGCCAAACAATGCTCATGCTGATTTTGATGTGTATTGGGTTGACAACAGTAAAGGTTAT
TGGCTTTATACCAGATGCAATTGGAAAACTTGTATTTGGATTGCCAAAGACGATGGAATTTACATAAAAGATATTCCTGTGAATCAAGATCAGCTTATTCATAAGTGGGA
G
Protein sequenceShow/hide protein sequence
MGCLKEPLGFMIVVALVLLHCSTLVSSAWPSWPTWHVNIANELNSEQTLFVHCQSKDDDLGEHNISVGTQYSFAFKDNIWGTTLFWCYMRKPNNAHADFDVYWVDNSKGY
WLYTRCNWKTCIWIAKDDGIYIKDIPVNQDQLIHKWE