; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002485 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002485
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold318:496627..497070
RNA-Seq ExpressionMS002485
SyntenyMS002485
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458036.1 PREDICTED: pumilio homolog 15-like [Cucumis melo]5.1e-5168.31Show/hide
Query:  MGAIYFKNHLLVFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWV
        MGAI FK+ LLVFL +S LA+A  KPLS WEIHIKN L NGQ LFV CKSKD DLG +TL +G EFKW+FKVNIWDTTLFWCYLRK     E  FDAFWV
Subjt:  MGAIYFKNHLLVFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWV

Query:  EKKTEWLRIKCKDHRCFWTAEDRGIFLLDGIRNVDEYLHPWK
        EKKTEWLR+KC  + C WT ED GI+L D   N DE++H WK
Subjt:  EKKTEWLRIKCKDHRCFWTAEDRGIFLLDGIRNVDEYLHPWK

XP_011659760.2 S-protein homolog 74-like [Cucumis sativus]1.5e-5067.61Show/hide
Query:  MGAIYFKNHLLVFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWV
        MGAI FK+ LLVFL +S LA+AR KPLS WEIHIKN L +G+ LFV CKSKD DLG RTL +G EFKW+FKVNIWDTTLFWCYLRK    D+  FDAFWV
Subjt:  MGAIYFKNHLLVFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWV

Query:  EKKTEWLRIKCKDHRCFWTAEDRGIFLLDGIRNVDEYLHPWK
        EKKTEWLR+KC  + C W AED GI+L D   N +E++H WK
Subjt:  EKKTEWLRIKCKDHRCFWTAEDRGIFLLDGIRNVDEYLHPWK

XP_022152709.1 S-protein homolog 74-like [Momordica charantia]1.7e-7590.34Show/hide
Query:  MGAIYFKNHLLVFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWV
        MGAI  KNHLLVFL ISLLAVAR KPLS+WEIHIKNALK+GQRLFVHCKSKD+DLGARTL+SGTEFKWDFKVNIWDTTLFWCYLRKD+QRDEC FDAFWV
Subjt:  MGAIYFKNHLLVFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWV

Query:  EKKTEWLRIKCKDHRCFWTAEDRGIFLLDGIRNVDEYLHPWKMIP
        EKKTEWLRIKCK+HRCFWTAED+GI+LLDG RNVDEYLHPWKMIP
Subjt:  EKKTEWLRIKCKDHRCFWTAEDRGIFLLDGIRNVDEYLHPWKMIP

XP_022152906.1 S-protein homolog 1-like [Momordica charantia]8.6e-8397.3Show/hide
Query:  MGAIYFKNHLLVFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWV
        MGAIYFKNHLLVFL ISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYL KDQQRDECAFDAFWV
Subjt:  MGAIYFKNHLLVFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWV

Query:  EKKTEWLRIKCKDHRCFWTAEDRGIFLLDGIRNVDEYLHPWKMIPPYQ
        EKKTEWLRIKCKD RCFWTAEDRGIFLLDG RNVDEYLHPWKMIPPYQ
Subjt:  EKKTEWLRIKCKDHRCFWTAEDRGIFLLDGIRNVDEYLHPWKMIPPYQ

XP_023515021.1 S-protein homolog 74-like [Cucurbita pepo subsp. pepo]3.9e-5167.61Show/hide
Query:  MGAIYFKNHLLVFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWV
        M AI  KN +LVFL  S LA+A  KP S WEIHIKN LKNGQ +FVHCKSKD+DLG  TL +GTEFKWDFKVN WDTTLFWCYLRK     E  FDAFWV
Subjt:  MGAIYFKNHLLVFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWV

Query:  EKKTEWLRIKCKDHRCFWTAEDRGIFLLDGIRNVDEYLHPWK
        EK+TEWLR+KC  + C WTAED GI+L D   N+DE++H WK
Subjt:  EKKTEWLRIKCKDHRCFWTAEDRGIFLLDGIRNVDEYLHPWK

TrEMBL top hitse value%identityAlignment
A0A1S3C711 S-protein homolog2.5e-5168.31Show/hide
Query:  MGAIYFKNHLLVFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWV
        MGAI FK+ LLVFL +S LA+A  KPLS WEIHIKN L NGQ LFV CKSKD DLG +TL +G EFKW+FKVNIWDTTLFWCYLRK     E  FDAFWV
Subjt:  MGAIYFKNHLLVFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWV

Query:  EKKTEWLRIKCKDHRCFWTAEDRGIFLLDGIRNVDEYLHPWK
        EKKTEWLR+KC  + C WT ED GI+L D   N DE++H WK
Subjt:  EKKTEWLRIKCKDHRCFWTAEDRGIFLLDGIRNVDEYLHPWK

A0A5D3E4D8 S-protein homolog2.5e-5168.31Show/hide
Query:  MGAIYFKNHLLVFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWV
        MGAI FK+ LLVFL +S LA+A  KPLS WEIHIKN L NGQ LFV CKSKD DLG +TL +G EFKW+FKVNIWDTTLFWCYLRK     E  FDAFWV
Subjt:  MGAIYFKNHLLVFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWV

Query:  EKKTEWLRIKCKDHRCFWTAEDRGIFLLDGIRNVDEYLHPWK
        EKKTEWLR+KC  + C WT ED GI+L D   N DE++H WK
Subjt:  EKKTEWLRIKCKDHRCFWTAEDRGIFLLDGIRNVDEYLHPWK

A0A6J1DGU7 S-protein homolog8.4e-7690.34Show/hide
Query:  MGAIYFKNHLLVFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWV
        MGAI  KNHLLVFL ISLLAVAR KPLS+WEIHIKNALK+GQRLFVHCKSKD+DLGARTL+SGTEFKWDFKVNIWDTTLFWCYLRKD+QRDEC FDAFWV
Subjt:  MGAIYFKNHLLVFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWV

Query:  EKKTEWLRIKCKDHRCFWTAEDRGIFLLDGIRNVDEYLHPWKMIP
        EKKTEWLRIKCK+HRCFWTAED+GI+LLDG RNVDEYLHPWKMIP
Subjt:  EKKTEWLRIKCKDHRCFWTAEDRGIFLLDGIRNVDEYLHPWKMIP

A0A6J1DJ51 S-protein homolog4.2e-8397.3Show/hide
Query:  MGAIYFKNHLLVFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWV
        MGAIYFKNHLLVFL ISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYL KDQQRDECAFDAFWV
Subjt:  MGAIYFKNHLLVFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWV

Query:  EKKTEWLRIKCKDHRCFWTAEDRGIFLLDGIRNVDEYLHPWKMIPPYQ
        EKKTEWLRIKCKD RCFWTAEDRGIFLLDG RNVDEYLHPWKMIPPYQ
Subjt:  EKKTEWLRIKCKDHRCFWTAEDRGIFLLDGIRNVDEYLHPWKMIPPYQ

A0A6J1HAC3 S-protein homolog7.2e-5166.9Show/hide
Query:  MGAIYFKNHLLVFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWV
        M AI  KN +LVFL  S LA+A  KP S WEIHIKN L NGQ +FVHCKSKD+DLG  TL +GTEFKWDFKVN WDTTLFWCYLRK     E  FDAFWV
Subjt:  MGAIYFKNHLLVFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWV

Query:  EKKTEWLRIKCKDHRCFWTAEDRGIFLLDGIRNVDEYLHPWK
        EK+TEWLR+KC  + C WTAED GI+L D   N+DE++H WK
Subjt:  EKKTEWLRIKCKDHRCFWTAEDRGIFLLDGIRNVDEYLHPWK

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 28.5e-0930.17Show/hide
Query:  PLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWVEKKTEWLRIKCKDHRCFWTAEDRGI
        P S   + I N L N   L  HCKSKDDDLG RTL+ G  + + F    +  TL++C        +  +FD  + + +      KC+  RC W     G 
Subjt:  PLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWVEKKTEWLRIKCKDHRCFWTAEDRGI

Query:  FLLDGIRNVDEYLHPW
           +      +  +PW
Subjt:  FLLDGIRNVDEYLHPW

F4JLS0 S-protein homolog 11.3e-1735.04Show/hide
Query:  LSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWVEKKTEWLRIKCKDHRCFWTAEDRGIF
        +S W++ + N L  G+ LF+HCKSK+DDLG   LK    F W+F  N+  +T FWCY+ KD        + FW +     L  +C    C WTA+  G++
Subjt:  LSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWVEKKTEWLRIKCKDHRCFWTAEDRGIF

Query:  LLDGIRNVDEYLHPWKM
        L +     D     W++
Subjt:  LLDGIRNVDEYLHPWKM

Q2HQ46 S-protein homolog 743.8e-1736.21Show/hide
Query:  LSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWVEKKTEWLRIKCKDHRCFWTAEDRGIF
        +S W++ + N L  G+ LF+HCKSK++DLG   LK    F W+F  N+  +TLFWCY+ KD          FW +     L  +C    C WTA++ G++
Subjt:  LSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWVEKKTEWLRIKCKDHRCFWTAEDRGIF

Query:  LLDGIRNVDEYLHPWK
        L +     D     WK
Subjt:  LLDGIRNVDEYLHPWK

Q40975 Self-incompatibility protein S12.5e-0827.52Show/hide
Query:  EIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWVEKKTEWLRIKCKDHRCFWTAEDRGIFLLDG
        E+ I N   NG+ + +HC+SKD+DL  +T+ SG +  + F+ + + TT F+C L+ D++  +  F ++  ++  +    +C   +C W   D G++  D 
Subjt:  EIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWVEKKTEWLRIKCKDHRCFWTAEDRGIFLLDG

Query:  IRNVDEYLH
           + +  H
Subjt:  IRNVDEYLH

Q9LW22 S-protein homolog 211.7e-0935.2Show/hide
Query:  HLLVFLFISLLAVARPKPLSHWEIHIKNAL--KNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRK----DQQRDECAFDAFWVEK
        +L +FLF+  L +          I +KN L  KN   L VHCKSK++D+G + LK G    + FK N W TT FWC L K     + R   A+ A     
Subjt:  HLLVFLFISLLAVARPKPLSHWEIHIKNAL--KNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRK----DQQRDECAFDAFWVEK

Query:  KTEWLRIKCKDHRCF-WTAEDRGIF
            + +  KD   + W A D GI+
Subjt:  KTEWLRIKCKDHRCF-WTAEDRGIF

Arabidopsis top hitse value%identityAlignment
AT3G26880.1 Plant self-incompatibility protein S1 family1.2e-1035.2Show/hide
Query:  HLLVFLFISLLAVARPKPLSHWEIHIKNAL--KNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRK----DQQRDECAFDAFWVEK
        +L +FLF+  L +          I +KN L  KN   L VHCKSK++D+G + LK G    + FK N W TT FWC L K     + R   A+ A     
Subjt:  HLLVFLFISLLAVARPKPLSHWEIHIKNAL--KNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRK----DQQRDECAFDAFWVEK

Query:  KTEWLRIKCKDHRCF-WTAEDRGIF
            + +  KD   + W A D GI+
Subjt:  KTEWLRIKCKDHRCF-WTAEDRGIF

AT4G16295.1 S-protein homologue 19.3e-1935.04Show/hide
Query:  LSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWVEKKTEWLRIKCKDHRCFWTAEDRGIF
        +S W++ + N L  G+ LF+HCKSK+DDLG   LK    F W+F  N+  +T FWCY+ KD        + FW +     L  +C    C WTA+  G++
Subjt:  LSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWVEKKTEWLRIKCKDHRCFWTAEDRGIF

Query:  LLDGIRNVDEYLHPWKM
        L +     D     W++
Subjt:  LLDGIRNVDEYLHPWKM

AT4G29035.1 Plant self-incompatibility protein S1 family2.7e-1836.21Show/hide
Query:  LSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWVEKKTEWLRIKCKDHRCFWTAEDRGIF
        +S W++ + N L  G+ LF+HCKSK++DLG   LK    F W+F  N+  +TLFWCY+ KD          FW +     L  +C    C WTA++ G++
Subjt:  LSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWVEKKTEWLRIKCKDHRCFWTAEDRGIF

Query:  LLDGIRNVDEYLHPWK
        L +     D     WK
Subjt:  LLDGIRNVDEYLHPWK

AT5G04347.1 Plant self-incompatibility protein S1 family2.7e-1035.34Show/hide
Query:  VFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQ-RDECAFDAFWVEKKTEWLRIK
        +F+F+ LL+V          + +KN L N + L V C+SKDD+LG   L+ G   K +F  N+W  TLFWC L K    +   AFDA+  + K +     
Subjt:  VFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQ-RDECAFDAFWVEKKTEWLRIK

Query:  CKDHRCFWTAEDRGIF
            R  W A + GI+
Subjt:  CKDHRCFWTAEDRGIF

AT5G04350.1 Plant self-incompatibility protein S1 family2.5e-1130.6Show/hide
Query:  NHLLVFLFISLLAVARPK---PLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWVEKKT
        N+L +F  +  L +        +   ++ + N L++ + L VHC+SKDDDLG   LK G ++++ F  NIW TT F C +    Q         +V  +T
Subjt:  NHLLVFLFISLLAVARPK---PLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWVEKKT

Query:  EWLRIKCKDHRCFWTAEDRGI-FLLDGIRNVDEY
         W   K  +  C W   + GI F  DG+    +Y
Subjt:  EWLRIKCKDHRCFWTAEDRGI-FLLDGIRNVDEY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGCCATCTATTTCAAGAACCATCTTCTGGTATTCCTGTTCATCTCGCTGCTGGCCGTGGCTCGCCCGAAGCCACTGAGCCATTGGGAGATCCATATCAAGAACGC
GCTGAAAAATGGGCAACGACTGTTCGTGCACTGTAAGTCCAAAGACGACGACTTGGGTGCACGAACCCTCAAGAGCGGGACCGAGTTCAAATGGGATTTCAAAGTGAACA
TTTGGGACACGACGTTGTTCTGGTGCTACTTGCGCAAGGATCAACAGAGGGATGAGTGTGCATTCGATGCGTTTTGGGTCGAGAAGAAGACCGAGTGGCTACGCATCAAA
TGCAAGGATCATAGGTGCTTTTGGACTGCAGAAGACCGAGGGATTTTCCTCCTTGATGGTATTCGGAATGTTGATGAGTACCTACATCCCTGGAAAATGATACCACCATA
TCAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGCCATCTATTTCAAGAACCATCTTCTGGTATTCCTGTTCATCTCGCTGCTGGCCGTGGCTCGCCCGAAGCCACTGAGCCATTGGGAGATCCATATCAAGAACGC
GCTGAAAAATGGGCAACGACTGTTCGTGCACTGTAAGTCCAAAGACGACGACTTGGGTGCACGAACCCTCAAGAGCGGGACCGAGTTCAAATGGGATTTCAAAGTGAACA
TTTGGGACACGACGTTGTTCTGGTGCTACTTGCGCAAGGATCAACAGAGGGATGAGTGTGCATTCGATGCGTTTTGGGTCGAGAAGAAGACCGAGTGGCTACGCATCAAA
TGCAAGGATCATAGGTGCTTTTGGACTGCAGAAGACCGAGGGATTTTCCTCCTTGATGGTATTCGGAATGTTGATGAGTACCTACATCCCTGGAAAATGATACCACCATA
TCAG
Protein sequenceShow/hide protein sequence
MGAIYFKNHLLVFLFISLLAVARPKPLSHWEIHIKNALKNGQRLFVHCKSKDDDLGARTLKSGTEFKWDFKVNIWDTTLFWCYLRKDQQRDECAFDAFWVEKKTEWLRIK
CKDHRCFWTAEDRGIFLLDGIRNVDEYLHPWKMIPPYQ