; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002487 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002487
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold318:504901..505347
RNA-Seq ExpressionMS002487
SyntenyMS002487
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458036.1 PREDICTED: pumilio homolog 15-like [Cucumis melo]3.2e-5371.13Show/hide
Query:  MGAISFKNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWV
        MGAISFK+ LLVFL++S LA+A SKPLS WEIHIKN L +GQ LFV CKSKD+DLG +TL +G EFKW+FKVNIWDTTLFWCYLRK     E +FDAFWV
Subjt:  MGAISFKNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWV

Query:  EKKTEWLRIKCKEHRCFWTVEDQGIYLLDGSRNVDEYLHPWK
        EKKTEWLR+KC  + C WTVED GIYL D S N DE++H WK
Subjt:  EKKTEWLRIKCKEHRCFWTVEDQGIYLLDGSRNVDEYLHPWK

XP_011659760.2 S-protein homolog 74-like [Cucumis sativus]1.6e-5270.42Show/hide
Query:  MGAISFKNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWV
        MGAISFK+ LLVFL++S LA+ARSKPLS WEIHIKN L  G+ LFV CKSKD+DLG RTL +G EFKW+FKVNIWDTTLFWCYLRK    D+ RFDAFWV
Subjt:  MGAISFKNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWV

Query:  EKKTEWLRIKCKEHRCFWTVEDQGIYLLDGSRNVDEYLHPWK
        EKKTEWLR+KC  + C W  ED GIYL D S N +E++H WK
Subjt:  EKKTEWLRIKCKEHRCFWTVEDQGIYLLDGSRNVDEYLHPWK

XP_022152709.1 S-protein homolog 74-like [Momordica charantia]4.6e-8497.99Show/hide
Query:  MGAISFKNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWV
        MGAI+ KNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWV
Subjt:  MGAISFKNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWV

Query:  EKKTEWLRIKCKEHRCFWTVEDQGIYLLDGSRNVDEYLHPWKMIPYPLN
        EKKTEWLRIKCKEHRCFWT EDQGIYLLDGSRNVDEYLHPWKMIPYPLN
Subjt:  EKKTEWLRIKCKEHRCFWTVEDQGIYLLDGSRNVDEYLHPWKMIPYPLN

XP_022152906.1 S-protein homolog 1-like [Momordica charantia]5.6e-7490.34Show/hide
Query:  MGAISFKNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWV
        MGAI FKNHLLVFLLISLLAVAR KPLS+WEIHIKNALK+GQRLFVHCKSKD+DLGARTL+SGTEFKWDFKVNIWDTTLFWCYL KD+QRDEC FDAFWV
Subjt:  MGAISFKNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWV

Query:  EKKTEWLRIKCKEHRCFWTVEDQGIYLLDGSRNVDEYLHPWKMIP
        EKKTEWLRIKCK+ RCFWT ED+GI+LLDGSRNVDEYLHPWKMIP
Subjt:  EKKTEWLRIKCKEHRCFWTVEDQGIYLLDGSRNVDEYLHPWKMIP

XP_023515021.1 S-protein homolog 74-like [Cucurbita pepo subsp. pepo]2.1e-5269.72Show/hide
Query:  MGAISFKNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWV
        M AIS KN +LVFL+ S LA+A SKP S WEIHIKN LK+GQ +FVHCKSKDNDLG  TL +GTEFKWDFKVN WDTTLFWCYLRK     E  FDAFWV
Subjt:  MGAISFKNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWV

Query:  EKKTEWLRIKCKEHRCFWTVEDQGIYLLDGSRNVDEYLHPWK
        EK+TEWLR+KC  + C WT ED GIYL D S N+DE++H WK
Subjt:  EKKTEWLRIKCKEHRCFWTVEDQGIYLLDGSRNVDEYLHPWK

TrEMBL top hitse value%identityAlignment
A0A1S3C711 S-protein homolog1.6e-5371.13Show/hide
Query:  MGAISFKNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWV
        MGAISFK+ LLVFL++S LA+A SKPLS WEIHIKN L +GQ LFV CKSKD+DLG +TL +G EFKW+FKVNIWDTTLFWCYLRK     E +FDAFWV
Subjt:  MGAISFKNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWV

Query:  EKKTEWLRIKCKEHRCFWTVEDQGIYLLDGSRNVDEYLHPWK
        EKKTEWLR+KC  + C WTVED GIYL D S N DE++H WK
Subjt:  EKKTEWLRIKCKEHRCFWTVEDQGIYLLDGSRNVDEYLHPWK

A0A5D3E4D8 S-protein homolog1.6e-5371.13Show/hide
Query:  MGAISFKNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWV
        MGAISFK+ LLVFL++S LA+A SKPLS WEIHIKN L +GQ LFV CKSKD+DLG +TL +G EFKW+FKVNIWDTTLFWCYLRK     E +FDAFWV
Subjt:  MGAISFKNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWV

Query:  EKKTEWLRIKCKEHRCFWTVEDQGIYLLDGSRNVDEYLHPWK
        EKKTEWLR+KC  + C WTVED GIYL D S N DE++H WK
Subjt:  EKKTEWLRIKCKEHRCFWTVEDQGIYLLDGSRNVDEYLHPWK

A0A6J1DGU7 S-protein homolog2.2e-8497.99Show/hide
Query:  MGAISFKNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWV
        MGAI+ KNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWV
Subjt:  MGAISFKNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWV

Query:  EKKTEWLRIKCKEHRCFWTVEDQGIYLLDGSRNVDEYLHPWKMIPYPLN
        EKKTEWLRIKCKEHRCFWT EDQGIYLLDGSRNVDEYLHPWKMIPYPLN
Subjt:  EKKTEWLRIKCKEHRCFWTVEDQGIYLLDGSRNVDEYLHPWKMIPYPLN

A0A6J1DJ51 S-protein homolog2.7e-7490.34Show/hide
Query:  MGAISFKNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWV
        MGAI FKNHLLVFLLISLLAVAR KPLS+WEIHIKNALK+GQRLFVHCKSKD+DLGARTL+SGTEFKWDFKVNIWDTTLFWCYL KD+QRDEC FDAFWV
Subjt:  MGAISFKNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWV

Query:  EKKTEWLRIKCKEHRCFWTVEDQGIYLLDGSRNVDEYLHPWKMIP
        EKKTEWLRIKCK+ RCFWT ED+GI+LLDGSRNVDEYLHPWKMIP
Subjt:  EKKTEWLRIKCKEHRCFWTVEDQGIYLLDGSRNVDEYLHPWKMIP

A0A6J1HAC3 S-protein homolog3.8e-5269.01Show/hide
Query:  MGAISFKNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWV
        M AIS KN +LVFL+ S LA+A SKP S WEIHIKN L +GQ +FVHCKSKDNDLG  TL +GTEFKWDFKVN WDTTLFWCYLRK     E  FDAFWV
Subjt:  MGAISFKNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWV

Query:  EKKTEWLRIKCKEHRCFWTVEDQGIYLLDGSRNVDEYLHPWK
        EK+TEWLR+KC  + C WT ED GIYL D S N+DE++H WK
Subjt:  EKKTEWLRIKCKEHRCFWTVEDQGIYLLDGSRNVDEYLHPWK

SwissProt top hitse value%identityAlignment
B3H730 S-protein homolog 184.3e-0830.43Show/hide
Query:  LLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWVEKKTEWLRI
        +L  +LI+ L V   +   +  + I N +    +L +HCKSK  DLG ++L     + +   +N+W+TTLF+C+   + Q     FD    ++ T    I
Subjt:  LLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWVEKKTEWLRI

Query:  KCKEHRCFWTVEDQG
         CK H C W++   G
Subjt:  KCKEHRCFWTVEDQG

F4JLQ5 S-protein homolog 25.6e-0828.1Show/hide
Query:  PLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWVEKKTEWLRIKCKEHRCFWTVEDQGI
        P S   + I N L +   L  HCKSKD+DLG RTL+ G  + + F    +  TL++C      +     FD  + + +      KC+  RC W +   G 
Subjt:  PLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWVEKKTEWLRIKCKEHRCFWTVEDQGI

Query:  YLLDGSRNVDEYLHPWKMIPY
           +      +  +PW    Y
Subjt:  YLLDGSRNVDEYLHPWKMIPY

F4JLS0 S-protein homolog 11.9e-1633.33Show/hide
Query:  LSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWVEKKTEWLRIKCKEHRCFWTVEDQGIY
        +S W++ + N L  G+ LF+HCKSK++DLG   L+    F W+F  N+  +T FWCY+ KD        + FW +     L  +C    C WT +  G+Y
Subjt:  LSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWVEKKTEWLRIKCKEHRCFWTVEDQGIY

Query:  LLDGSRNVDEYLHPWKM
        L + +   D     W++
Subjt:  LLDGSRNVDEYLHPWKM

Q2HQ46 S-protein homolog 745.0e-1736.21Show/hide
Query:  LSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWVEKKTEWLRIKCKEHRCFWTVEDQGIY
        +S W++ + N L  G+ LF+HCKSK+NDLG   L+    F W+F  N+  +TLFWCY+ KD          FW +     L  +C    C WT ++ G+Y
Subjt:  LSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWVEKKTEWLRIKCKEHRCFWTVEDQGIY

Query:  LLDGSRNVDEYLHPWK
        L + +   D     WK
Subjt:  LLDGSRNVDEYLHPWK

Q40975 Self-incompatibility protein S11.2e-1030.53Show/hide
Query:  VFLLISLLAVARSKPLSYW---EIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWVEKKTEWLR
        +F +I LL+   SK   ++   E+ I N   +G+ + +HC+SKDNDL  +T+ SG +  + F+ + + TT F+C L+ DK   E +F  +  + K +   
Subjt:  VFLLISLLAVARSKPLSYW---EIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWVEKKTEWLR

Query:  IKCKEHRCFWTVEDQGIYLLDGSRNVDEYLH
         +C   +C W + D G+Y  D    + +  H
Subjt:  IKCKEHRCFWTVEDQGIYLLDGSRNVDEYLH

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family4.0e-0928.1Show/hide
Query:  PLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWVEKKTEWLRIKCKEHRCFWTVEDQGI
        P S   + I N L +   L  HCKSKD+DLG RTL+ G  + + F    +  TL++C      +     FD  + + +      KC+  RC W +   G 
Subjt:  PLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWVEKKTEWLRIKCKEHRCFWTVEDQGI

Query:  YLLDGSRNVDEYLHPWKMIPY
           +      +  +PW    Y
Subjt:  YLLDGSRNVDEYLHPWKMIPY

AT4G16295.1 S-protein homologue 11.4e-1733.33Show/hide
Query:  LSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWVEKKTEWLRIKCKEHRCFWTVEDQGIY
        +S W++ + N L  G+ LF+HCKSK++DLG   L+    F W+F  N+  +T FWCY+ KD        + FW +     L  +C    C WT +  G+Y
Subjt:  LSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWVEKKTEWLRIKCKEHRCFWTVEDQGIY

Query:  LLDGSRNVDEYLHPWKM
        L + +   D     W++
Subjt:  LLDGSRNVDEYLHPWKM

AT4G24973.1 Plant self-incompatibility protein S1 family3.0e-0930.43Show/hide
Query:  LLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWVEKKTEWLRI
        +L  +LI+ L V   +   +  + I N +    +L +HCKSK  DLG ++L     + +   +N+W+TTLF+C+   + Q     FD    ++ T    I
Subjt:  LLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWVEKKTEWLRI

Query:  KCKEHRCFWTVEDQG
         CK H C W++   G
Subjt:  KCKEHRCFWTVEDQG

AT4G29035.1 Plant self-incompatibility protein S1 family3.6e-1836.21Show/hide
Query:  LSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWVEKKTEWLRIKCKEHRCFWTVEDQGIY
        +S W++ + N L  G+ LF+HCKSK+NDLG   L+    F W+F  N+  +TLFWCY+ KD          FW +     L  +C    C WT ++ G+Y
Subjt:  LSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWVEKKTEWLRIKCKEHRCFWTVEDQGIY

Query:  LLDGSRNVDEYLHPWK
        L + +   D     WK
Subjt:  LLDGSRNVDEYLHPWK

AT5G04350.1 Plant self-incompatibility protein S1 family4.2e-1131.97Show/hide
Query:  NHLLVFLLISLLAVARSK---PLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWVEKKT
        N+L +F ++  L +  S     +   ++ + N L+H + L VHC+SKD+DLG   L+ G ++++ F  NIW TT F C +    Q    +    +V  +T
Subjt:  NHLLVFLLISLLAVARSK---PLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWVEKKT

Query:  EWLRIKCKEHRCFWTVEDQGIY
         W   K  E  C W   + GIY
Subjt:  EWLRIKCKEHRCFWTVEDQGIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGCCATCTCTTTCAAGAACCATCTTCTGGTCTTCCTGCTCATCTCGCTCCTGGCCGTGGCTCGCTCGAAGCCACTGAGCTATTGGGAGATCCACATCAAGAACGC
GCTGAAACATGGGCAACGACTGTTTGTGCACTGCAAGTCAAAAGACAATGACTTGGGTGCACGAACCCTCGAGAGCGGGACCGAGTTCAAATGGGATTTCAAAGTGAACA
TTTGGGACACGACGTTGTTCTGGTGCTACTTGCGCAAGGATAAACAGAGGGATGAGTGTAGATTCGATGCGTTTTGGGTCGAGAAGAAGACCGAGTGGCTGCGCATCAAA
TGCAAGGAGCATAGGTGCTTTTGGACTGTAGAAGACCAAGGGATTTACCTCTTAGATGGTAGTCGGAATGTTGATGAGTACCTACATCCCTGGAAAATGATACCATATCC
GTTGAAC
mRNA sequenceShow/hide mRNA sequence
ATGGGTGCCATCTCTTTCAAGAACCATCTTCTGGTCTTCCTGCTCATCTCGCTCCTGGCCGTGGCTCGCTCGAAGCCACTGAGCTATTGGGAGATCCACATCAAGAACGC
GCTGAAACATGGGCAACGACTGTTTGTGCACTGCAAGTCAAAAGACAATGACTTGGGTGCACGAACCCTCGAGAGCGGGACCGAGTTCAAATGGGATTTCAAAGTGAACA
TTTGGGACACGACGTTGTTCTGGTGCTACTTGCGCAAGGATAAACAGAGGGATGAGTGTAGATTCGATGCGTTTTGGGTCGAGAAGAAGACCGAGTGGCTGCGCATCAAA
TGCAAGGAGCATAGGTGCTTTTGGACTGTAGAAGACCAAGGGATTTACCTCTTAGATGGTAGTCGGAATGTTGATGAGTACCTACATCCCTGGAAAATGATACCATATCC
GTTGAAC
Protein sequenceShow/hide protein sequence
MGAISFKNHLLVFLLISLLAVARSKPLSYWEIHIKNALKHGQRLFVHCKSKDNDLGARTLESGTEFKWDFKVNIWDTTLFWCYLRKDKQRDECRFDAFWVEKKTEWLRIK
CKEHRCFWTVEDQGIYLLDGSRNVDEYLHPWKMIPYPLN