; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002490 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002490
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold318:517118..517564
RNA-Seq ExpressionMS002490
SyntenyMS002490
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016902699.1 PREDICTED: uncharacterized protein LOC107991826 [Cucumis melo]1.5e-5568.75Show/hide
Query:  VRSTKKHFLV--FLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDV
        +RS K HFLV  FL VLSL I++PT+A   L++W IH+VNGLSN Q LFVHC+SKD+DLG+  L+ GTEFNWTF++N W+TTLFWCYL KP+ +S SF+ 
Subjt:  VRSTKKHFLV--FLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDV

Query:  FWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEW
        FWVE+KSIWLFYRC+ SNCIWTAKDDGIYL+DNP  RD LVH W
Subjt:  FWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEW

XP_022143772.1 S-protein homolog 74-like [Momordica charantia]7.1e-8599.33Show/hide
Query:  MSQAMGVRSTKKHFLVFLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSA
        MSQAMGVRSTKKHFLVFLLVLSLVILEP EAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSA
Subjt:  MSQAMGVRSTKKHFLVFLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSA

Query:  SFDVFWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEWK
        SFDVFWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEWK
Subjt:  SFDVFWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEWK

XP_022143780.1 S-protein homolog 1-like [Momordica charantia]7.1e-5370.8Show/hide
Query:  KHFLVFLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKS
        KHFLVFL V SL I+E  EA   L KWQIHV N LSN Q LFVHCKSK++DLGEHNL+ GTEFNW FRVN+W+TTL+WCYL KP+G+S SFD FWVEK S
Subjt:  KHFLVFLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKS

Query:  IWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEW
        IWL+Y+C  SNC W AKDDGIYLR+NP  RD+ VH+W
Subjt:  IWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEW

XP_022143829.1 S-protein homolog 74-like [Momordica charantia]1.9e-5872.41Show/hide
Query:  MGVRSTKKHFLVFLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDV
        MG R  KKHFLV LL LSL I+EP  +  ELK+W IHVVNGL NG+ LFVHCKS+D+DLGE NL  G EF+WTFRVN+ +TTLFWC+L KPD +S SFD 
Subjt:  MGVRSTKKHFLVFLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDV

Query:  FWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEWK
        FWVEK SIWLFYRCY +NCIWTAKDDG+YLRDNPVQRD+LVH+W+
Subjt:  FWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEWK

XP_031745090.1 S-protein homolog 1-like [Cucumis sativus]1.1e-5062Show/hide
Query:  MSQAMGVRSTKKHFLVFLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSA
        M++ + +   KK  +V L VL L ILE T+A  EL+KW IHVVNGLSNGQ L  HCKSKDNDLGE  L +GTEFNW FRVN WNTTLFWCYL KP+G+ +
Subjt:  MSQAMGVRSTKKHFLVFLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSA

Query:  SFDVFWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDN-PVQRDILVHEWK
        SF+ FW+E +S+WL+  C+  NCIWTAKDDGIYL+DN    +DIL+H+W+
Subjt:  SFDVFWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDN-PVQRDILVHEWK

TrEMBL top hitse value%identityAlignment
A0A1S4E390 S-protein homolog7.4e-5668.75Show/hide
Query:  VRSTKKHFLV--FLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDV
        +RS K HFLV  FL VLSL I++PT+A   L++W IH+VNGLSN Q LFVHC+SKD+DLG+  L+ GTEFNWTF++N W+TTLFWCYL KP+ +S SF+ 
Subjt:  VRSTKKHFLV--FLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDV

Query:  FWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEW
        FWVE+KSIWLFYRC+ SNCIWTAKDDGIYL+DNP  RD LVH W
Subjt:  FWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEW

A0A6J1CPR8 S-protein homolog3.5e-5370.8Show/hide
Query:  KHFLVFLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKS
        KHFLVFL V SL I+E  EA   L KWQIHV N LSN Q LFVHCKSK++DLGEHNL+ GTEFNW FRVN+W+TTL+WCYL KP+G+S SFD FWVEK S
Subjt:  KHFLVFLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKS

Query:  IWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEW
        IWL+Y+C  SNC W AKDDGIYLR+NP  RD+ VH+W
Subjt:  IWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEW

A0A6J1CQH6 S-protein homolog9.4e-5972.41Show/hide
Query:  MGVRSTKKHFLVFLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDV
        MG R  KKHFLV LL LSL I+EP  +  ELK+W IHVVNGL NG+ LFVHCKS+D+DLGE NL  G EF+WTFRVN+ +TTLFWC+L KPD +S SFD 
Subjt:  MGVRSTKKHFLVFLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDV

Query:  FWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEWK
        FWVEK SIWLFYRCY +NCIWTAKDDG+YLRDNPVQRD+LVH+W+
Subjt:  FWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEWK

A0A6J1CRU0 S-protein homolog3.4e-8599.33Show/hide
Query:  MSQAMGVRSTKKHFLVFLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSA
        MSQAMGVRSTKKHFLVFLLVLSLVILEP EAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSA
Subjt:  MSQAMGVRSTKKHFLVFLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSA

Query:  SFDVFWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEWK
        SFDVFWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEWK
Subjt:  SFDVFWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEWK

A0A6J1HAC3 S-protein homolog8.0e-4257.24Show/hide
Query:  MGVRSTKKHFLVFLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDV
        M   S K   LVF LV S + L  ++ FS   KW+IH+ N LSNGQ +FVHCKSKDNDLGEH L +GTEF W F+VN W+TTLFWCYL KP+G   +FD 
Subjt:  MGVRSTKKHFLVFLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDV

Query:  FWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEWK
        FWVEK++ WL  +C  + C WTA+D+GIYL+DN    D  VH WK
Subjt:  FWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEWK

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 62.6e-1332.85Show/hide
Query:  LVFLLVLSLVILEPTEAFSE---LKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKS
        ++F++++SL+  E  +   +   +K     VV    N   L VHCKS+D+D G H L  G  + W F VN  N+TL++C   +   K   FD++    K+
Subjt:  LVFLLVLSLVILEPTEAFSE---LKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKS

Query:  IWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEW
        +    RC   NC W AK+DGIY      +++ L ++W
Subjt:  IWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEW

F4JLS0 S-protein homolog 11.7e-2846.55Show/hide
Query:  ELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYHSNCIWTAKDDGIY
        ++ +WQ+ VVNGL+ G+TLF+HCKSK++DLGE NL     F+W F  N+ ++T FWCY++K +G   + +VFW     + LF+RC   NCIWTAK DG+Y
Subjt:  ELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYHSNCIWTAKDDGIY

Query:  LRDNPVQRDILVHEWK
        L ++    D+L  +W+
Subjt:  LRDNPVQRDILVHEWK

P0DN92 S-protein homolog 241.8e-1433.33Show/hide
Query:  FLVFLLVLSLV---ILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKK
        F+V ++V+SL+    L+  EA   ++     V     N   L +HCKS+D+DLG H L  G  F W F VN   +TL++C   +   K   F+++   + 
Subjt:  FLVFLLVLSLV---ILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKK

Query:  SIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEW
            FYRC  +NC W A+ DGIY       +  L + W
Subjt:  SIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEW

Q2HQ46 S-protein homolog 741.2e-2947.41Show/hide
Query:  ELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYHSNCIWTAKDDGIY
        ++ +WQ+ V NGL+ G+TLF+HCKSK+NDLG+ NL     F+W F  N+ ++TLFWCY+ K DG   +  VFW     + LF+RC   NC+WTAK+DG+Y
Subjt:  ELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYHSNCIWTAKDDGIY

Query:  LRDNPVQRDILVHEWK
        L ++ +  D+L  +WK
Subjt:  LRDNPVQRDILVHEWK

Q9FI84 S-protein homolog 277.5e-1337.25Show/hide
Query:  SNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVH
        +N   L +HCKSKD+DLG H    G  + W F VN  N+TL++C   +       FD+   E+     FYRC   NC W AK D +Y   N  Q      
Subjt:  SNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVH

Query:  EW
        +W
Subjt:  EW

Arabidopsis top hitse value%identityAlignment
AT1G28305.1 Plant self-incompatibility protein S1 family1.3e-1237.5Show/hide
Query:  KHFLVFLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQ---TLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWC-YLHKPDGKSA-SFDVFW
        K+  VFL    L I+     +    K  +H+ N L   Q    LFV CKS   D+G+H +  G  + +  R N W TTLFWC + H PD ++   FDV+ 
Subjt:  KHFLVFLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQ---TLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWC-YLHKPDGKSA-SFDVFW

Query:  VEKKSIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDI-LVHEWK
         E K        Y     WTA++DGIY R N  Q  I  VH WK
Subjt:  VEKKSIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDI-LVHEWK

AT4G16295.1 S-protein homologue 11.2e-2946.55Show/hide
Query:  ELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYHSNCIWTAKDDGIY
        ++ +WQ+ VVNGL+ G+TLF+HCKSK++DLGE NL     F+W F  N+ ++T FWCY++K +G   + +VFW     + LF+RC   NCIWTAK DG+Y
Subjt:  ELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYHSNCIWTAKDDGIY

Query:  LRDNPVQRDILVHEWK
        L ++    D+L  +W+
Subjt:  LRDNPVQRDILVHEWK

AT4G29035.1 Plant self-incompatibility protein S1 family8.2e-3147.41Show/hide
Query:  ELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYHSNCIWTAKDDGIY
        ++ +WQ+ V NGL+ G+TLF+HCKSK+NDLG+ NL     F+W F  N+ ++TLFWCY+ K DG   +  VFW     + LF+RC   NC+WTAK+DG+Y
Subjt:  ELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYHSNCIWTAKDDGIY

Query:  LRDNPVQRDILVHEWK
        L ++ +  D+L  +WK
Subjt:  LRDNPVQRDILVHEWK

AT5G04350.1 Plant self-incompatibility protein S1 family1.1e-1432.28Show/hide
Query:  HFLVFLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSI
        +  +F +V+ L I   + AF E+ + ++ + N L + + L VHC+SKD+DLGEH L  G ++ +TF  N+W TT F C + +  G +    + +V  ++ 
Subjt:  HFLVFLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSI

Query:  WLFYRCYHSNCIWTAKDDGIYLRDNPV
        W   +   ++C W  ++DGIY   + V
Subjt:  WLFYRCYHSNCIWTAKDDGIYLRDNPV

AT5G06020.1 Plant self-incompatibility protein S1 family5.3e-1437.25Show/hide
Query:  SNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVH
        +N   L +HCKSKD+DLG H    G  + W F VN  N+TL++C   +       FD+   E+     FYRC   NC W AK D +Y   N  Q      
Subjt:  SNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVH

Query:  EW
        +W
Subjt:  EW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAAGCAATGGGAGTTAGATCTACGAAGAAGCACTTTTTGGTTTTCTTACTTGTCTTGTCATTGGTCATACTTGAGCCAACTGAGGCTTTTTCCGAGTTGAAAAA
ATGGCAGATCCACGTTGTGAATGGGCTCAGCAACGGCCAAACACTCTTTGTGCACTGCAAATCGAAGGACAACGATCTAGGTGAACACAACCTTAATAGCGGAACTGAAT
TCAACTGGACTTTTAGAGTGAACCTTTGGAACACGACGTTGTTTTGGTGTTACTTGCATAAACCAGATGGAAAATCTGCGTCATTTGATGTCTTTTGGGTTGAGAAGAAA
TCGATTTGGCTCTTTTACAGATGCTACCATTCCAACTGTATTTGGACCGCGAAAGATGATGGAATCTACTTGAGAGACAACCCAGTTCAAAGAGATATTTTAGTTCATGA
GTGGAAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCAAGCAATGGGAGTTAGATCTACGAAGAAGCACTTTTTGGTTTTCTTACTTGTCTTGTCATTGGTCATACTTGAGCCAACTGAGGCTTTTTCCGAGTTGAAAAA
ATGGCAGATCCACGTTGTGAATGGGCTCAGCAACGGCCAAACACTCTTTGTGCACTGCAAATCGAAGGACAACGATCTAGGTGAACACAACCTTAATAGCGGAACTGAAT
TCAACTGGACTTTTAGAGTGAACCTTTGGAACACGACGTTGTTTTGGTGTTACTTGCATAAACCAGATGGAAAATCTGCGTCATTTGATGTCTTTTGGGTTGAGAAGAAA
TCGATTTGGCTCTTTTACAGATGCTACCATTCCAACTGTATTTGGACCGCGAAAGATGATGGAATCTACTTGAGAGACAACCCAGTTCAAAGAGATATTTTAGTTCATGA
GTGGAAA
Protein sequenceShow/hide protein sequence
MSQAMGVRSTKKHFLVFLLVLSLVILEPTEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKK
SIWLFYRCYHSNCIWTAKDDGIYLRDNPVQRDILVHEWK