; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002492 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002492
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold318:524036..524479
RNA-Seq ExpressionMS002492
SyntenyMS002492
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016902699.1 PREDICTED: uncharacterized protein LOC107991826 [Cucumis melo]1.9e-5366.9Show/hide
Query:  RFLKKHFLV--VLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFW
        R +K HFLV   L  LSLAIV+P  +I L+RW+IH+VNGL N Q LFVHC+S+DDDLG++ L  G EF+WTF++N  DTTLFWC+L+KPNA+SVSF+AFW
Subjt:  RFLKKHFLV--VLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFW

Query:  VEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKW
        VE+ SIWLFYRC+ +NCIWTAKDDG+YL+DNP  RD LVH W
Subjt:  VEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKW

XP_022143772.1 S-protein homolog 74-like [Momordica charantia]1.2e-6072.48Show/hide
Query:  ISQAMGRRFLKKHFLVVLLFLSLAIVEP-DTSIELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSV
        +SQAMG R  KKHFLV LL LSL I+EP +   ELK+W IHVVNGL NGQ LFVHCKS+D+DLGE NL  G EF+WTFRVN+ +TTLFWC+L KP+ +S 
Subjt:  ISQAMGRRFLKKHFLVVLLFLSLAIVEP-DTSIELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSV

Query:  SFDAFWVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKWQ
        SFD FWVEK SIWLFYRCY +NCIWTAKDDG+YLRDNPVQRD+LVH+W+
Subjt:  SFDAFWVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKWQ

XP_022143780.1 S-protein homolog 1-like [Momordica charantia]8.7e-5166.91Show/hide
Query:  KHFLVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFWVEKTSI
        KHFLV L   SLAIVE   ++ L +W IHV N L N Q+LFVHCKS++DDLGE NL  G EF+W FRVN+ DTTL+WC+L+KPN QSVSFDAFWVEK SI
Subjt:  KHFLVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFWVEKTSI

Query:  WLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKW
        WL+Y+C ++NC W AKDDG+YLR+NP  RDV VHKW
Subjt:  WLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKW

XP_022143829.1 S-protein homolog 74-like [Momordica charantia]6.2e-8198.61Show/hide
Query:  MGRRFLKKHFLVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAF
        MGRRFLKKHFLVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNG+LLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKP+AQSVSFDAF
Subjt:  MGRRFLKKHFLVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAF

Query:  WVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKWQ
        WVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKWQ
Subjt:  WVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKWQ

XP_038896594.1 S-protein homolog 1-like [Benincasa hispida]2.4e-4859.72Show/hide
Query:  MGRRFLKKHFLVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAF
        M  R + K  +V+   L LA+++ + + EL +W IHVVNGL NGQ+LFVHCKS+D+DLGE  L  G EF+W FRVN  +TTLFWC+L+KPNAQ  SF AF
Subjt:  MGRRFLKKHFLVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAF

Query:  WVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKWQ
        W+E TS+WL+  CYD+NCIW AKDDGVYL+DN    DVL+HKW+
Subjt:  WVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKWQ

TrEMBL top hitse value%identityAlignment
A0A1S4E390 S-protein homolog9.0e-5466.9Show/hide
Query:  RFLKKHFLV--VLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFW
        R +K HFLV   L  LSLAIV+P  +I L+RW+IH+VNGL N Q LFVHC+S+DDDLG++ L  G EF+WTF++N  DTTLFWC+L+KPNA+SVSF+AFW
Subjt:  RFLKKHFLV--VLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFW

Query:  VEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKW
        VE+ SIWLFYRC+ +NCIWTAKDDG+YL+DNP  RD LVH W
Subjt:  VEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKW

A0A6J1CPR8 S-protein homolog4.2e-5166.91Show/hide
Query:  KHFLVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFWVEKTSI
        KHFLV L   SLAIVE   ++ L +W IHV N L N Q+LFVHCKS++DDLGE NL  G EF+W FRVN+ DTTL+WC+L+KPN QSVSFDAFWVEK SI
Subjt:  KHFLVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFWVEKTSI

Query:  WLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKW
        WL+Y+C ++NC W AKDDG+YLR+NP  RDV VHKW
Subjt:  WLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKW

A0A6J1CQH6 S-protein homolog3.0e-8198.61Show/hide
Query:  MGRRFLKKHFLVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAF
        MGRRFLKKHFLVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNG+LLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKP+AQSVSFDAF
Subjt:  MGRRFLKKHFLVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAF

Query:  WVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKWQ
        WVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKWQ
Subjt:  WVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKWQ

A0A6J1CRU0 S-protein homolog5.8e-6172.48Show/hide
Query:  ISQAMGRRFLKKHFLVVLLFLSLAIVEP-DTSIELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSV
        +SQAMG R  KKHFLV LL LSL I+EP +   ELK+W IHVVNGL NGQ LFVHCKS+D+DLGE NL  G EF+WTFRVN+ +TTLFWC+L KP+ +S 
Subjt:  ISQAMGRRFLKKHFLVVLLFLSLAIVEP-DTSIELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSV

Query:  SFDAFWVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKWQ
        SFD FWVEK SIWLFYRCY +NCIWTAKDDG+YLRDNPVQRD+LVH+W+
Subjt:  SFDAFWVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKWQ

A0A6J1DPJ1 S-protein homolog1.1e-4060.74Show/hide
Query:  FLVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYD-GAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFWVEKTSIW
        F VVL+ +   +V     + L +WNIHVVNGL N   LFVHCKS+DDDLG  +L   G E  WTFR+N   TTL+WCF+ KPNA  VSFD+FWVEKT IW
Subjt:  FLVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYD-GAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFWVEKTSIW

Query:  LFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKW
        L YRC D  CIWTAKDDG+YLR+ P   D LVHKW
Subjt:  LFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKW

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 63.3e-1332.59Show/hide
Query:  FLVVLLFLSLAIVEPDTSI-ELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFWVEKTSIW
        F+V++  +    ++ D  +  +K     VV    N  LL VHCKSRDDD G   L  G  + W F VN +++TL++C   +   +   FD +   + S  
Subjt:  FLVVLLFLSLAIVEPDTSI-ELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFWVEKTSIW

Query:  LFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKW
           RC   NC W AK+DG+Y      +++ L +KW
Subjt:  LFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKW

F4JLS0 S-protein homolog 19.1e-2740.94Show/hide
Query:  KHFLVVLLFLSLAIVEPDTSI------------ELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSV
        K FL+ + F SLA+   D  +            ++  W + VVNGL  G+ LF+HCKS++DDLGE NL     FSW F  N++ +T FWC++ K N   +
Subjt:  KHFLVVLLFLSLAIVEPDTSI------------ELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSV

Query:  SFDAFWVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKWQ
        + + FW     + LF+RC   NCIWTAK DG+YL ++    DVL  KW+
Subjt:  SFDAFWVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKWQ

P0DN92 S-protein homolog 243.3e-1337.62Show/hide
Query:  NGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFWVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHK
        N  LL +HCKSRDDDLG   L  G  F W F VN   +TL++C   +   +   F+ +   +     FYRC  ANC W A+ DG+Y       +  L + 
Subjt:  NGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFWVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHK

Query:  W
        W
Subjt:  W

Q2HQ46 S-protein homolog 741.7e-2536.67Show/hide
Query:  FLKKHFLVVLLFLSLA----IVEPDTSI------ELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQS
        ++K+  L +  +L L     ++  DT+       ++  W + V NGL  G+ LF+HCKS+++DLG+ NL     FSW F  N++ +TLFWC++ K +   
Subjt:  FLKKHFLVVLLFLSLA----IVEPDTSI------ELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQS

Query:  VSFDAFWVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKWQ
        ++   FW     + LF+RC   NC+WTAK+DG+YL ++ +  DVL  KW+
Subjt:  VSFDAFWVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKWQ

Q9FMQ4 S-protein homolog 32.8e-1232.79Show/hide
Query:  HFLVVLLFLSLAIVEPDTSIELKRWN----IHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFWVEK
        H +V+ L + +A  +  T  ++  W+    + + N LG+G  L +HCKS DDDLG + L     +S+ FR +++ TTLF+C    P  QS  FD +  ++
Subjt:  HFLVVLLFLSLAIVEPDTSIELKRWN----IHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFWVEK

Query:  TSIWLFYRCYDANCIWTAKDDG
          +     C   NCIW     G
Subjt:  TSIWLFYRCYDANCIWTAKDDG

Arabidopsis top hitse value%identityAlignment
AT4G16295.1 S-protein homologue 16.4e-2840.94Show/hide
Query:  KHFLVVLLFLSLAIVEPDTSI------------ELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSV
        K FL+ + F SLA+   D  +            ++  W + VVNGL  G+ LF+HCKS++DDLGE NL     FSW F  N++ +T FWC++ K N   +
Subjt:  KHFLVVLLFLSLAIVEPDTSI------------ELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSV

Query:  SFDAFWVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKWQ
        + + FW     + LF+RC   NCIWTAK DG+YL ++    DVL  KW+
Subjt:  SFDAFWVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKWQ

AT4G29035.1 Plant self-incompatibility protein S1 family1.2e-2636.67Show/hide
Query:  FLKKHFLVVLLFLSLA----IVEPDTSI------ELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQS
        ++K+  L +  +L L     ++  DT+       ++  W + V NGL  G+ LF+HCKS+++DLG+ NL     FSW F  N++ +TLFWC++ K +   
Subjt:  FLKKHFLVVLLFLSLA----IVEPDTSI------ELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQS

Query:  VSFDAFWVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKWQ
        ++   FW     + LF+RC   NC+WTAK+DG+YL ++ +  DVL  KW+
Subjt:  VSFDAFWVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKWQ

AT5G06020.1 Plant self-incompatibility protein S1 family5.9e-1337.62Show/hide
Query:  NGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFWVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHK
        N  LL +HCKS+DDDLG     +G  + W F VN  ++TL++C   +       FD    E+     FYRC   NC W AK D +Y   N  Q      K
Subjt:  NGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFWVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHK

Query:  W
        W
Subjt:  W

AT5G06030.1 Plant self-incompatibility protein S1 family3.8e-1237.62Show/hide
Query:  NGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFWVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHK
        N  LL +HCKSRDDDLG   L  G  F W F VN   +TL +C   +       F  +   +     FYRC  ANC W A+ DG +   +   R  L + 
Subjt:  NGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFWVEKTSIWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHK

Query:  W
        W
Subjt:  W

AT5G12060.1 Plant self-incompatibility protein S1 family2.0e-1332.79Show/hide
Query:  HFLVVLLFLSLAIVEPDTSIELKRWN----IHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFWVEK
        H +V+ L + +A  +  T  ++  W+    + + N LG+G  L +HCKS DDDLG + L     +S+ FR +++ TTLF+C    P  QS  FD +  ++
Subjt:  HFLVVLLFLSLAIVEPDTSIELKRWN----IHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFWVEK

Query:  TSIWLFYRCYDANCIWTAKDDG
          +     C   NCIW     G
Subjt:  TSIWLFYRCYDANCIWTAKDDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATATCTCAAGCAATGGGGAGGAGATTTCTGAAGAAGCACTTTCTTGTTGTCTTGCTTTTCTTGTCATTGGCCATAGTTGAGCCAGATACTTCTATTGAACTGAAAAGATG
GAACATCCATGTGGTGAATGGGTTGGGCAACGGCCAACTTCTCTTTGTGCACTGCAAATCAAGAGATGATGATCTAGGCGAACAGAACCTCTACGACGGAGCTGAATTCA
GCTGGACTTTCAGGGTGAATGTTATAGACACGACCTTGTTTTGGTGTTTTTTGCGGAAGCCAAATGCGCAATCTGTGTCATTCGATGCCTTCTGGGTCGAGAAGACATCG
ATTTGGCTCTTTTATCGATGCTACGATGCTAACTGTATTTGGACTGCAAAAGACGATGGAGTGTACCTGAGAGATAATCCTGTTCAAAGAGACGTTTTGGTTCATAAATG
GCAA
mRNA sequenceShow/hide mRNA sequence
ATATCTCAAGCAATGGGGAGGAGATTTCTGAAGAAGCACTTTCTTGTTGTCTTGCTTTTCTTGTCATTGGCCATAGTTGAGCCAGATACTTCTATTGAACTGAAAAGATG
GAACATCCATGTGGTGAATGGGTTGGGCAACGGCCAACTTCTCTTTGTGCACTGCAAATCAAGAGATGATGATCTAGGCGAACAGAACCTCTACGACGGAGCTGAATTCA
GCTGGACTTTCAGGGTGAATGTTATAGACACGACCTTGTTTTGGTGTTTTTTGCGGAAGCCAAATGCGCAATCTGTGTCATTCGATGCCTTCTGGGTCGAGAAGACATCG
ATTTGGCTCTTTTATCGATGCTACGATGCTAACTGTATTTGGACTGCAAAAGACGATGGAGTGTACCTGAGAGATAATCCTGTTCAAAGAGACGTTTTGGTTCATAAATG
GCAA
Protein sequenceShow/hide protein sequence
ISQAMGRRFLKKHFLVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGQLLFVHCKSRDDDLGEQNLYDGAEFSWTFRVNVIDTTLFWCFLRKPNAQSVSFDAFWVEKTS
IWLFYRCYDANCIWTAKDDGVYLRDNPVQRDVLVHKWQ