; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002493 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002493
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold318:525800..526237
RNA-Seq ExpressionMS002493
SyntenyMS002493
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067970.1 uncharacterized protein E6C27_scaffold138G001560 [Cucumis melo var. makuwa]1.7e-5975.89Show/hide
Query:  MALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKH
        + +LL+L A+AVVQP TA   VPLPLP+WRIHVVNGL+N+TL VHCKSKDDDLG HNLV +G+EFQWTFKVNF+GTTLFWCYL+KPNF+VSFES+WVEK 
Subjt:  MALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKH

Query:  EPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEWKKI
         PWLNSRCF  +CIWIAKDD +YL+NNL NVDE +HEW KI
Subjt:  EPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEWKKI

XP_004139722.1 S-protein homolog 1-like [Cucumis sativus]1.1e-5071.22Show/hide
Query:  LLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEP
        LL++L A+ VVQP  A   VP+P PRW IHVVNGLSN+TL VHCKS DDDLG  +LV RG EF WTF+V+ +G TLFWCYLEKPNF+VSFES+WVEKH  
Subjt:  LLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEP

Query:  WLNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEWKKI
        WLNSRC+DKNCIWIAKDDGIYL+NN  N+DE VH W K+
Subjt:  WLNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEWKKI

XP_008461539.1 PREDICTED: uncharacterized protein LOC103500111 [Cucumis melo]1.5e-5876.6Show/hide
Query:  MALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKH
        M LLL+L A+ +VQP TA   VPLPLP+W IHVVNGL N TLFVHCKSKDDDLGNH L  +G E QWTFKVNF+GTTLFWCYL+KPNF V+FES+WVEK 
Subjt:  MALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKH

Query:  EPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEWKKI
         PWL SRCFDKNCIWIAKDDGIYL+NNL NVDELVH W K+
Subjt:  EPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEWKKI

XP_008462114.1 PREDICTED: uncharacterized protein LOC103500542 [Cucumis melo]2.3e-5171.74Show/hide
Query:  LLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPW
        LL+L A+ VVQP TA   VP+P PRW IHVVNGLSN+TL VHCKS+DDDLG  +LV +G EF WTF+V+ +G TLFWCYLEKPNF+VSFES+WVEKH  W
Subjt:  LLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPW

Query:  LNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEWKKI
        LNSRC+DKNCIWIAKDDGIYL+NN  N++E VH W KI
Subjt:  LNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEWKKI

XP_022143645.1 S-protein homolog 1-like [Momordica charantia]1.8e-4867.39Show/hide
Query:  MALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKH
        + + L+    AV+Q  TA  L    LP+W IHVVNGLS  TLFVHCKSKDDDLG HNLV RGDEFQWTF+VNFW TTL+WCYL+KPN +VSFES+WVE+ 
Subjt:  MALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKH

Query:  EPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEW
          WL  RC DKNCIW AKDDGIYL+NN   VDE +HEW
Subjt:  EPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEW

TrEMBL top hitse value%identityAlignment
A0A1S3CEQ0 S-protein homolog7.0e-5976.6Show/hide
Query:  MALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKH
        M LLL+L A+ +VQP TA   VPLPLP+W IHVVNGL N TLFVHCKSKDDDLGNH L  +G E QWTFKVNF+GTTLFWCYL+KPNF V+FES+WVEK 
Subjt:  MALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKH

Query:  EPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEWKKI
         PWL SRCFDKNCIWIAKDDGIYL+NNL NVDELVH W K+
Subjt:  EPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEWKKI

A0A1S3CG89 S-protein homolog1.1e-5171.74Show/hide
Query:  LLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPW
        LL+L A+ VVQP TA   VP+P PRW IHVVNGLSN+TL VHCKS+DDDLG  +LV +G EF WTF+V+ +G TLFWCYLEKPNF+VSFES+WVEKH  W
Subjt:  LLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPW

Query:  LNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEWKKI
        LNSRC+DKNCIWIAKDDGIYL+NN  N++E VH W KI
Subjt:  LNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEWKKI

A0A5A7VL75 S-protein homolog8.3e-6075.89Show/hide
Query:  MALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKH
        + +LL+L A+AVVQP TA   VPLPLP+WRIHVVNGL+N+TL VHCKSKDDDLG HNLV +G+EFQWTFKVNF+GTTLFWCYL+KPNF+VSFES+WVEK 
Subjt:  MALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKH

Query:  EPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEWKKI
         PWLNSRCF  +CIWIAKDD +YL+NNL NVDE +HEW KI
Subjt:  EPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEWKKI

A0A6J1CPC6 S-protein homolog8.6e-4967.39Show/hide
Query:  MALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKH
        + + L+    AV+Q  TA  L    LP+W IHVVNGLS  TLFVHCKSKDDDLG HNLV RGDEFQWTF+VNFW TTL+WCYL+KPN +VSFES+WVE+ 
Subjt:  MALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKH

Query:  EPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEW
          WL  RC DKNCIW AKDDGIYL+NN   VDE +HEW
Subjt:  EPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEW

A0A6J1DPJ1 S-protein homolog1.2e-4562.59Show/hide
Query:  MALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSND-TLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEK
        M LL+    L VV+P    + +P+PL +W IHVVNGLSN+ TLFVHCKSKDDDLG H+L+ RGDE QWTF++NFW TTL+WC++ KPN +VSF+S+WVEK
Subjt:  MALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSND-TLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEK

Query:  HEPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEW
           WL  RC D  CIW AKDDGIYL+N   N DELVH+W
Subjt:  HEPWLNSRCFDKNCIWIAKDDGIYLKNNLANVDELVHEW

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 61.4e-1135.59Show/hide
Query:  PLPLPRWRIHVVNGLSNDTLF-VHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVS-FESYWVEKHEPWLNSRCFDKNCIWIAKDD
        P+  P  R+ + N   ND L  VHCKS+DDD G H ++ +G  + W F VNF  +TL++C   +       F+ Y   +     +SRC  +NC W AK+D
Subjt:  PLPLPRWRIHVVNGLSNDTLF-VHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVS-FESYWVEKHEPWLNSRCFDKNCIWIAKDD

Query:  GIYLKNNLANVDELVHEW
        GIY    +   + L ++W
Subjt:  GIYLKNNLANVDELVHEW

F4JLQ5 S-protein homolog 26.2e-1232.48Show/hide
Query:  PLPRWRIHVVNGLSND-TLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIWIAKDDGIY
        P  +  + + N L N  TL  HCKSKDDDLGN  L   G+ + ++F   F+G TL++C    PN + SF+ Y  +  +   +++C    C+W  + +G  
Subjt:  PLPRWRIHVVNGLSND-TLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIWIAKDDGIY

Query:  LKNNLANVDELVHEWKK
          N+     +L + W K
Subjt:  LKNNLANVDELVHEWKK

F4JLS0 S-protein homolog 11.6e-2343.55Show/hide
Query:  TAEVLVPLPLPRWRIHVVNGL-SNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIW
        T +++VP  +  W++ VVNGL + +TLF+HCKSK+DDLG  NL  R + F W F  N   +T FWCY+ K N +++   +W    +  L  RC  KNCIW
Subjt:  TAEVLVPLPLPRWRIHVVNGL-SNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIW

Query:  IAKDDGIYLKNNLANVDELVHEWK
         AK DG+YL N+ +  D L  +W+
Subjt:  IAKDDGIYLKNNLANVDELVHEWK

Q2HQ46 S-protein homolog 741.3e-2241.94Show/hide
Query:  TAEVLVPLPLPRWRIHVVNGL-SNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIW
        T +++VP  +  W++ V NGL + +TLF+HCKSK++DLG+ NL    D F W F  N   +TLFWCY+ K + +++ + +W    +  L  RC  KNC+W
Subjt:  TAEVLVPLPLPRWRIHVVNGL-SNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIW

Query:  IAKDDGIYLKNNLANVDELVHEWK
         AK+DG+YL N+    D L  +WK
Subjt:  IAKDDGIYLKNNLANVDELVHEWK

Q9LW22 S-protein homolog 211.6e-0734.38Show/hide
Query:  VNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEK-PNFN-----VSFESYWVEKHEPWLNSRCFDKNCIWIAKDDGIY
        +N  + + L VHCKSK++D+G   L   G+   ++FK NFWGTT FWC L K P++       ++++  +   +          +  W+A+DDGIY
Subjt:  VNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEK-PNFN-----VSFESYWVEKHEPWLNSRCFDKNCIWIAKDDGIY

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family4.4e-1332.48Show/hide
Query:  PLPRWRIHVVNGLSND-TLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIWIAKDDGIY
        P  +  + + N L N  TL  HCKSKDDDLGN  L   G+ + ++F   F+G TL++C    PN + SF+ Y  +  +   +++C    C+W  + +G  
Subjt:  PLPRWRIHVVNGLSND-TLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIWIAKDDGIY

Query:  LKNNLANVDELVHEWKK
          N+     +L + W K
Subjt:  LKNNLANVDELVHEWKK

AT4G16295.1 S-protein homologue 11.1e-2443.55Show/hide
Query:  TAEVLVPLPLPRWRIHVVNGL-SNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIW
        T +++VP  +  W++ VVNGL + +TLF+HCKSK+DDLG  NL  R + F W F  N   +T FWCY+ K N +++   +W    +  L  RC  KNCIW
Subjt:  TAEVLVPLPLPRWRIHVVNGL-SNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIW

Query:  IAKDDGIYLKNNLANVDELVHEWK
         AK DG+YL N+ +  D L  +W+
Subjt:  IAKDDGIYLKNNLANVDELVHEWK

AT4G29035.1 Plant self-incompatibility protein S1 family9.5e-2441.94Show/hide
Query:  TAEVLVPLPLPRWRIHVVNGL-SNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIW
        T +++VP  +  W++ V NGL + +TLF+HCKSK++DLG+ NL    D F W F  N   +TLFWCY+ K + +++ + +W    +  L  RC  KNC+W
Subjt:  TAEVLVPLPLPRWRIHVVNGL-SNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLNSRCFDKNCIW

Query:  IAKDDGIYLKNNLANVDELVHEWK
         AK+DG+YL N+    D L  +WK
Subjt:  IAKDDGIYLKNNLANVDELVHEWK

AT5G04347.1 Plant self-incompatibility protein S1 family1.1e-1136.04Show/hide
Query:  VVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEK-PNF--NVSFESYWVEKHEPWLNSRCFDKNCIWIAKDDGIYLKNNLA
        V N L+N  L V C+SKDD+LG+H ++  G   +  F  N W  TLFWC L K P+F  +V+F++Y       W          +WIA++DGIY   +  
Subjt:  VVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEK-PNF--NVSFESYWVEKHEPWLNSRCFDKNCIWIAKDDGIYLKNNLA

Query:  NVDELVHEWKK
           +  ++W K
Subjt:  NVDELVHEWKK

AT5G04350.1 Plant self-incompatibility protein S1 family2.2e-1238.04Show/hide
Query:  LFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEK-PNFN-----VSFESYWVEKHEPWLNSRCFDKNCIWIAKDDGIYLKNN
        L VHC+SKDDDLG H ++  G ++++TF  N W TT F C +++ PNF      V++E+ W         S+  + +C WI ++DGIY   +
Subjt:  LFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEK-PNFN-----VSFESYWVEKHEPWLNSRCFDKNCIWIAKDDGIYLKNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTGTTAAAACTAAAATGGCTCTTTTACTTCTCTTGGCGGCTCTGGCAGTGGTTCAACCATATACCGCGGAGGTGCTCGTTCCACTGCCGCTCCCACGGTGGCGTATTCA
TGTGGTTAACGGGCTGAGCAACGACACCCTTTTCGTGCATTGTAAGTCTAAGGACGATGATTTAGGCAACCACAATTTGGTCCACCGGGGAGATGAATTCCAATGGACTT
TTAAGGTAAATTTTTGGGGAACAACGTTGTTCTGGTGCTATTTGGAGAAACCAAATTTCAATGTGTCATTCGAATCGTATTGGGTTGAGAAACATGAACCTTGGCTCAAT
TCTAGGTGCTTTGACAAAAATTGCATTTGGATTGCAAAAGACGATGGTATTTACTTGAAAAACAATCTTGCGAACGTTGATGAGCTTGTTCATGAGTGGAAAAAAATT
mRNA sequenceShow/hide mRNA sequence
CTTGTTAAAACTAAAATGGCTCTTTTACTTCTCTTGGCGGCTCTGGCAGTGGTTCAACCATATACCGCGGAGGTGCTCGTTCCACTGCCGCTCCCACGGTGGCGTATTCA
TGTGGTTAACGGGCTGAGCAACGACACCCTTTTCGTGCATTGTAAGTCTAAGGACGATGATTTAGGCAACCACAATTTGGTCCACCGGGGAGATGAATTCCAATGGACTT
TTAAGGTAAATTTTTGGGGAACAACGTTGTTCTGGTGCTATTTGGAGAAACCAAATTTCAATGTGTCATTCGAATCGTATTGGGTTGAGAAACATGAACCTTGGCTCAAT
TCTAGGTGCTTTGACAAAAATTGCATTTGGATTGCAAAAGACGATGGTATTTACTTGAAAAACAATCTTGCGAACGTTGATGAGCTTGTTCATGAGTGGAAAAAAATT
Protein sequenceShow/hide protein sequence
LVKTKMALLLLLAALAVVQPYTAEVLVPLPLPRWRIHVVNGLSNDTLFVHCKSKDDDLGNHNLVHRGDEFQWTFKVNFWGTTLFWCYLEKPNFNVSFESYWVEKHEPWLN
SRCFDKNCIWIAKDDGIYLKNNLANVDELVHEWKKI