; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002494 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002494
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold318:528119..528457
RNA-Seq ExpressionMS002494
SyntenyMS002494
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143694.1 S-protein homolog 1-like [Momordica charantia]5.2e-4873.45Show/hide
Query:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN
        W V+IVNEL++ Q LFVHC+SKDDDLGEHN+  G QY F FKDN+W TTLFWCYLRKP+NSHA FDVYW D  KG+WLYTRC++K CIWIAK DGIYIK+
Subjt:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN

Query:  IPSNQDELVHPWE
        IP NQD+L+H WE
Subjt:  IPSNQDELVHPWE

XP_022152463.1 S-protein homolog 1-like [Momordica charantia]4.3e-66100Show/hide
Query:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN
        WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN
Subjt:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN

Query:  IPSNQDELVHPWE
        IPSNQDELVHPWE
Subjt:  IPSNQDELVHPWE

XP_022959591.1 S-protein homolog 1-like [Cucurbita moschata]1.3e-4367.26Show/hide
Query:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN
        WTV +VN L  GQ L  HCKSK+DD+G+ N+ +GA Y FTFKDNVWQTT FWC L KP+N+HA+FDVYWYD SK  WLYTRC    C+WI K DG+YIKN
Subjt:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN

Query:  IPSNQDELVHPWE
          +NQDELVHPWE
Subjt:  IPSNQDELVHPWE

XP_023005093.1 S-protein homolog 1-like [Cucurbita maxima]1.6e-4469.03Show/hide
Query:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN
        WTV +VN L  GQ L  HCKSK+DDLG+HNL +GA + FTFKDNVWQTT FWC L KP+N+HA+FDVYWYD SK  WLYTRC    C+WI K DG+YIKN
Subjt:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN

Query:  IPSNQDELVHPWE
          +NQDELVHPWE
Subjt:  IPSNQDELVHPWE

XP_023514776.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]7.8e-4468.14Show/hide
Query:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN
        WTV +VN L  GQ L  HCKSK+DDLG+ N+ +GA Y FTFKDNVWQTT FWC L KP+N+HA+FDVYWYD SK  WLYTRC    C+WI K DG+YIKN
Subjt:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN

Query:  IPSNQDELVHPWE
          +NQDELVHPWE
Subjt:  IPSNQDELVHPWE

TrEMBL top hitse value%identityAlignment
A0A6J1CQ33 S-protein homolog2.5e-4873.45Show/hide
Query:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN
        W V+IVNEL++ Q LFVHC+SKDDDLGEHN+  G QY F FKDN+W TTLFWCYLRKP+NSHA FDVYW D  KG+WLYTRC++K CIWIAK DGIYIK+
Subjt:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN

Query:  IPSNQDELVHPWE
        IP NQD+L+H WE
Subjt:  IPSNQDELVHPWE

A0A6J1CQW3 S-protein homolog2.1e-4266.96Show/hide
Query:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN
        W VDIVN LS+GQ LF+HCKSKDDDLG HNL  GA++G+ F+DN+W TTLFWCY+RKPDN++A+F+VYW D SK  WLY  C++++CIW AK DGIYIKN
Subjt:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN

Query:  IPSNQDELVHPW
        I  N+DEL H W
Subjt:  IPSNQDELVHPW

A0A6J1DEX4 S-protein homolog2.1e-66100Show/hide
Query:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN
        WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN
Subjt:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN

Query:  IPSNQDELVHPWE
        IPSNQDELVHPWE
Subjt:  IPSNQDELVHPWE

A0A6J1H5A3 S-protein homolog6.5e-4467.26Show/hide
Query:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN
        WTV +VN L  GQ L  HCKSK+DD+G+ N+ +GA Y FTFKDNVWQTT FWC L KP+N+HA+FDVYWYD SK  WLYTRC    C+WI K DG+YIKN
Subjt:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN

Query:  IPSNQDELVHPWE
          +NQDELVHPWE
Subjt:  IPSNQDELVHPWE

A0A6J1L199 S-protein homolog7.6e-4569.03Show/hide
Query:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN
        WTV +VN L  GQ L  HCKSK+DDLG+HNL +GA + FTFKDNVWQTT FWC L KP+N+HA+FDVYWYD SK  WLYTRC    C+WI K DG+YIKN
Subjt:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN

Query:  IPSNQDELVHPWE
          +NQDELVHPWE
Subjt:  IPSNQDELVHPWE

SwissProt top hitse value%identityAlignment
B3H730 S-protein homolog 188.2e-1237.63Show/hide
Query:  VDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADG
        VDI+N++    +L +HCKSK  DLG  +L     +GFT   NVW+TTLF+C+    + S       W+DI K       C Y  C+W  +  G
Subjt:  VDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADG

F2Q9V4 S-protein homolog 64.1e-1137.25Show/hide
Query:  NGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVH
        N   L VHCKS+DDD G H L  G  YG+ F  N   +TL++C   +       FD+Y     K     +RC  +NC W AK DGIY       ++ L +
Subjt:  NGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVH

Query:  PW
         W
Subjt:  PW

F4JLQ5 S-protein homolog 23.9e-1436.04Show/hide
Query:  TVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNI
        TV+I N+L N   L  HCKSKDDDLG   L  G  + F+F    +  TL++C    P+ SH +FD+Y      G     +C+   C+W  + +G    N 
Subjt:  TVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNI

Query:  PSNQDELVHPW
         + Q +L +PW
Subjt:  PSNQDELVHPW

F4JLS0 S-protein homolog 14.1e-2746.9Show/hide
Query:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN
        W V +VN L+ G+ LF+HCKSK+DDLGE NL    ++ + F +N+  +T FWCY+ K DN H   +V+W D+     L+ RC +KNCIW AK DG+Y+ N
Subjt:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN

Query:  IPSNQDELVHPWE
          S +D L   WE
Subjt:  IPSNQDELVHPWE

Q2HQ46 S-protein homolog 742.5e-2442.48Show/hide
Query:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN
        W V + N L+ G+ LF+HCKSK++DLG+ NL    ++ + F +N+  +TLFWCY+ K D+ H    V+W D+     L+ RCD+KNC+W AK DG+Y+ N
Subjt:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN

Query:  IPSNQDELVHPWE
            +D L   W+
Subjt:  IPSNQDELVHPWE

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family2.8e-1536.04Show/hide
Query:  TVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNI
        TV+I N+L N   L  HCKSKDDDLG   L  G  + F+F    +  TL++C    P+ SH +FD+Y      G     +C+   C+W  + +G    N 
Subjt:  TVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNI

Query:  PSNQDELVHPW
         + Q +L +PW
Subjt:  PSNQDELVHPW

AT4G16295.1 S-protein homologue 12.9e-2846.9Show/hide
Query:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN
        W V +VN L+ G+ LF+HCKSK+DDLGE NL    ++ + F +N+  +T FWCY+ K DN H   +V+W D+     L+ RC +KNCIW AK DG+Y+ N
Subjt:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN

Query:  IPSNQDELVHPWE
          S +D L   WE
Subjt:  IPSNQDELVHPWE

AT4G29035.1 Plant self-incompatibility protein S1 family1.7e-2542.48Show/hide
Query:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN
        W V + N L+ G+ LF+HCKSK++DLG+ NL    ++ + F +N+  +TLFWCY+ K D+ H    V+W D+     L+ RCD+KNC+W AK DG+Y+ N
Subjt:  WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKN

Query:  IPSNQDELVHPWE
            +D L   W+
Subjt:  IPSNQDELVHPWE

AT5G04347.1 Plant self-incompatibility protein S1 family2.8e-1541.23Show/hide
Query:  TVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRK-PD-NSHAAFDVYWYDISKGHWLYTRCDY-KNCIWIAKADGIYI
        T+ + NEL+N + L V C+SKDD+LG+H L  G      F DNVW+ TLFWC L K PD   H AFD Y     +  W   + D     +WIA+ DGIY 
Subjt:  TVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRK-PD-NSHAAFDVYWYDISKGHWLYTRCDY-KNCIWIAKADGIYI

Query:  KNIPSNQDELVHPW
           P    +  + W
Subjt:  KNIPSNQDELVHPW

AT5G04350.1 Plant self-incompatibility protein S1 family2.5e-1643.16Show/hide
Query:  VDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIY
        V + N+L + + L VHC+SKDDDLGEH L  G  Y FTF DN+WQTT F C + +  N     D   Y+ S     +++    +C WI + DGIY
Subjt:  VDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGACTGTGGACATTGTCAATGAGCTAAGCAATGGACAAGAACTATTCGTGCATTGCAAGTCCAAGGACGATGATTTGGGAGAACACAACCTCGACAGTGGAGCTCAATA
TGGGTTTACTTTCAAAGACAATGTTTGGCAAACAACATTGTTTTGGTGTTACTTGCGAAAGCCCGACAATAGTCATGCCGCTTTTGATGTTTATTGGTATGATATTAGCA
AAGGTCATTGGCTTTATACAAGATGCGACTATAAAAATTGCATTTGGATTGCTAAAGCCGACGGGATTTACATAAAAAATATCCCTTCAAATCAAGACGAGCTTGTTCAC
CCGTGGGAA
mRNA sequenceShow/hide mRNA sequence
TGGACTGTGGACATTGTCAATGAGCTAAGCAATGGACAAGAACTATTCGTGCATTGCAAGTCCAAGGACGATGATTTGGGAGAACACAACCTCGACAGTGGAGCTCAATA
TGGGTTTACTTTCAAAGACAATGTTTGGCAAACAACATTGTTTTGGTGTTACTTGCGAAAGCCCGACAATAGTCATGCCGCTTTTGATGTTTATTGGTATGATATTAGCA
AAGGTCATTGGCTTTATACAAGATGCGACTATAAAAATTGCATTTGGATTGCTAAAGCCGACGGGATTTACATAAAAAATATCCCTTCAAATCAAGACGAGCTTGTTCAC
CCGTGGGAA
Protein sequenceShow/hide protein sequence
WTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELVH
PWE