; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002495 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002495
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold318:532058..532489
RNA-Seq ExpressionMS002495
SyntenyMS002495
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143839.1 S-protein homolog 1-like [Momordica charantia]1.9e-8298.61Show/hide
Query:  VAVLLLVSAALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESR
        VAVLLLVSAALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRL+RGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESR
Subjt:  VAVLLLVSAALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESR

Query:  NAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPANSEELIHKWISL
        NAWLRNRCHNGTEGHCIWTAKDDGIYLRNIP NSEELIHKWISL
Subjt:  NAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPANSEELIHKWISL

XP_022143852.1 S-protein homolog 74-like [Momordica charantia]4.9e-5166.43Show/hide
Query:  VAVLLLVSAALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESR
        V VLLLV  ALVGA   P G        RW+VH+VN LNN+ L VHCKSKD+DL YQRL+ GADF WSF+VN WGTTLFWCNL K  AY +F+ FWPES+
Subjt:  VAVLLLVSAALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESR

Query:  NAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPANSEELIHKWIS
        N WLR RC + T+G+CIWTAKDDGIYL+NIP N EEL+HKW S
Subjt:  NAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPANSEELIHKWIS

XP_022933268.1 S-protein homolog 1-like [Cucurbita moschata]3.1e-4561.97Show/hide
Query:  VAVLLLVSAALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRLI-RGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPES
        + V  L + ALVGAQ      P  L   R+++HVVN L+N  L VHC+SKDDDLGY  L+  G D+QW+FKVNFWGTTLFWC +  P AYV+FE FWPES
Subjt:  VAVLLLVSAALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRLI-RGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPES

Query:  RNAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPANSEELIHKW
        ++ WLR+RC +GT G CIWTAKDDGIYLRN  AN +ELIHKW
Subjt:  RNAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPANSEELIHKW

XP_022991767.1 S-protein homolog 74-like [Cucurbita maxima]3.7e-4663.01Show/hide
Query:  VAVLLLVSAALVGAQTKPSGSPSLLV---TQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRL-IRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFW
        V VLLL   A VGAQ      P ++      R++VHV N L+   L VHC+SKDDDLG   L  RG DFQW+FKVNFWGTTLFWC L +P AYVTFE FW
Subjt:  VAVLLLVSAALVGAQTKPSGSPSLLV---TQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRL-IRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFW

Query:  PESRNAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPANSEELIHKWI
        PES+N WLR+RC NGT+G C+W AKDDGIYL N PAN++ELIHKWI
Subjt:  PESRNAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPANSEELIHKWI

XP_038896423.1 S-protein homolog 1-like [Benincasa hispida]1.8e-4563.89Show/hide
Query:  VAVLLLVSAALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRLI-RGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPES
        V VL L +AALVGAQ  P  S       R++VHVVN L+N  + VHC+SKDDDLGY  L+ RG D+QW+FK NFWGTTLFWC L KP AYV+FE FWPES
Subjt:  VAVLLLVSAALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRLI-RGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPES

Query:  -RNAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPANSEELIHKWI
         +N WLR+RC  GT+G CIWTAKDDGIYLRN+P N +E +HKW+
Subjt:  -RNAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPANSEELIHKWI

TrEMBL top hitse value%identityAlignment
A0A5D3DIG9 S-protein homolog5.7e-4560.84Show/hide
Query:  VAVLLLVSAALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRLIR-GADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPES
        V VL L    LV  Q      P  L   R+ VHVVN L+   LDVHC+SKDDDLGY RL++ G +FQW+F+ NFWGTTLFWC L KP AYV FE FWPE+
Subjt:  VAVLLLVSAALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRLIR-GADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPES

Query:  RNAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPANSEELIHKWI
        +N WLR+RC  G +G CIWTAKDDGIYLRN+P N++E +HKWI
Subjt:  RNAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPANSEELIHKWI

A0A6J1CQI8 S-protein homolog9.0e-8398.61Show/hide
Query:  VAVLLLVSAALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESR
        VAVLLLVSAALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRL+RGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESR
Subjt:  VAVLLLVSAALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESR

Query:  NAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPANSEELIHKWISL
        NAWLRNRCHNGTEGHCIWTAKDDGIYLRNIP NSEELIHKWISL
Subjt:  NAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPANSEELIHKWISL

A0A6J1CS23 S-protein homolog2.4e-5166.43Show/hide
Query:  VAVLLLVSAALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESR
        V VLLLV  ALVGA   P G        RW+VH+VN LNN+ L VHCKSKD+DL YQRL+ GADF WSF+VN WGTTLFWCNL K  AY +F+ FWPES+
Subjt:  VAVLLLVSAALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESR

Query:  NAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPANSEELIHKWIS
        N WLR RC + T+G+CIWTAKDDGIYL+NIP N EEL+HKW S
Subjt:  NAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPANSEELIHKWIS

A0A6J1F497 S-protein homolog1.5e-4561.97Show/hide
Query:  VAVLLLVSAALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRLI-RGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPES
        + V  L + ALVGAQ      P  L   R+++HVVN L+N  L VHC+SKDDDLGY  L+  G D+QW+FKVNFWGTTLFWC +  P AYV+FE FWPES
Subjt:  VAVLLLVSAALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRLI-RGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPES

Query:  RNAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPANSEELIHKW
        ++ WLR+RC +GT G CIWTAKDDGIYLRN  AN +ELIHKW
Subjt:  RNAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPANSEELIHKW

A0A6J1JMS5 S-protein homolog1.8e-4663.01Show/hide
Query:  VAVLLLVSAALVGAQTKPSGSPSLLV---TQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRL-IRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFW
        V VLLL   A VGAQ      P ++      R++VHV N L+   L VHC+SKDDDLG   L  RG DFQW+FKVNFWGTTLFWC L +P AYVTFE FW
Subjt:  VAVLLLVSAALVGAQTKPSGSPSLLV---TQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRL-IRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFW

Query:  PESRNAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPANSEELIHKWI
        PES+N WLR+RC NGT+G C+W AKDDGIYL N PAN++ELIHKWI
Subjt:  PESRNAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPANSEELIHKWI

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 69.5e-1330.56Show/hide
Query:  VLLLVSAALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLH----KPGAYVTFEVFWPE
        ++ +V  +L+G +T         +       V+ N N+  L VHCKS+DDD G+  L +G  + W F VNF  +TL++C       K G +  ++     
Subjt:  VLLLVSAALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLH----KPGAYVTFEVFWPE

Query:  SRNAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPANSEELIHKWI
        S       RC N     C W AK+DGIY          L +KW+
Subjt:  SRNAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPANSEELIHKWI

F4JLQ5 S-protein homolog 23.6e-1231.2Show/hide
Query:  PSGSPSLLVTQRWHVHVVNNLNNNF-LDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESRNAWLRNRCHNGTEGHC
        PS + S+  T +  V + N+L N   L  HCKSKDDDLG + L  G  + +SF   F+G TL++C+   P    +F+++  + R++   N+C +     C
Subjt:  PSGSPSLLVTQRWHVHVVNNLNNNF-LDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESRNAWLRNRCHNGTEGHC

Query:  IWTAKDDGIYLRNIPANSEELIHKW
        +W  + +G    N      +L + W
Subjt:  IWTAKDDGIYLRNIPANSEELIHKW

F4JLS0 S-protein homolog 12.8e-1741.59Show/hide
Query:  WHVHVVNNL-NNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESRNAWLRNRCHNGTEGHCIWTAKDDGIYLR
        W V VVN L     L +HCKSK+DDLG   L     F W+F  N   +T FWC ++K   ++   VFW +     L +RC  G + +CIWTAK DG+YL 
Subjt:  WHVHVVNNL-NNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESRNAWLRNRCHNGTEGHCIWTAKDDGIYLR

Query:  NIPANSEELIHKW
        N  +  + L  KW
Subjt:  NIPANSEELIHKW

Q2HQ46 S-protein homolog 744.1e-1639.13Show/hide
Query:  WHVHVVNNL-NNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESRNAWLRNRCHNGTEGHCIWTAKDDGIYLR
        W V V N L     L +HCKSK++DLG   L     F W+F  N   +TLFWC + K   ++  +VFW +     L +RC      +C+WTAK+DG+YL 
Subjt:  WHVHVVNNL-NNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESRNAWLRNRCHNGTEGHCIWTAKDDGIYLR

Query:  NIPANSEELIHKWIS
        N     + L  KW S
Subjt:  NIPANSEELIHKWIS

Q9LW22 S-protein homolog 211.2e-1241.3Show/hide
Query:  VNNLNNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESRNAWLRNRCHNGTEGHCIWTAKDDGIY
        +N  N N L VHCKSK++D+G + L  G    +SFK NFWGTT FWCNL+K   Y  +         A+              W A+DDGIY
Subjt:  VNNLNNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESRNAWLRNRCHNGTEGHCIWTAKDDGIY

Arabidopsis top hitse value%identityAlignment
AT3G26880.1 Plant self-incompatibility protein S1 family8.8e-1441.3Show/hide
Query:  VNNLNNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESRNAWLRNRCHNGTEGHCIWTAKDDGIY
        +N  N N L VHCKSK++D+G + L  G    +SFK NFWGTT FWCNL+K   Y  +         A+              W A+DDGIY
Subjt:  VNNLNNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESRNAWLRNRCHNGTEGHCIWTAKDDGIY

AT4G16195.1 Plant self-incompatibility protein S1 family2.6e-1331.2Show/hide
Query:  PSGSPSLLVTQRWHVHVVNNLNNNF-LDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESRNAWLRNRCHNGTEGHC
        PS + S+  T +  V + N+L N   L  HCKSKDDDLG + L  G  + +SF   F+G TL++C+   P    +F+++  + R++   N+C +     C
Subjt:  PSGSPSLLVTQRWHVHVVNNLNNNF-LDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESRNAWLRNRCHNGTEGHC

Query:  IWTAKDDGIYLRNIPANSEELIHKW
        +W  + +G    N      +L + W
Subjt:  IWTAKDDGIYLRNIPANSEELIHKW

AT4G16295.1 S-protein homologue 12.0e-1841.59Show/hide
Query:  WHVHVVNNL-NNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESRNAWLRNRCHNGTEGHCIWTAKDDGIYLR
        W V VVN L     L +HCKSK+DDLG   L     F W+F  N   +T FWC ++K   ++   VFW +     L +RC  G + +CIWTAK DG+YL 
Subjt:  WHVHVVNNL-NNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESRNAWLRNRCHNGTEGHCIWTAKDDGIYLR

Query:  NIPANSEELIHKW
        N  +  + L  KW
Subjt:  NIPANSEELIHKW

AT4G29035.1 Plant self-incompatibility protein S1 family2.9e-1739.13Show/hide
Query:  WHVHVVNNL-NNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESRNAWLRNRCHNGTEGHCIWTAKDDGIYLR
        W V V N L     L +HCKSK++DLG   L     F W+F  N   +TLFWC + K   ++  +VFW +     L +RC      +C+WTAK+DG+YL 
Subjt:  WHVHVVNNL-NNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESRNAWLRNRCHNGTEGHCIWTAKDDGIYLR

Query:  NIPANSEELIHKWIS
        N     + L  KW S
Subjt:  NIPANSEELIHKWIS

AT5G04347.1 Plant self-incompatibility protein S1 family2.8e-1236.11Show/hide
Query:  VVNNLNNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESRNAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPAN
        V N LNN  L V C+SKDD+LG   L  G   + +F  N W  TLFWCNL K G      V +   R+ W  +          +W A++DGIY    P  
Subjt:  VVNNLNNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESRNAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPAN

Query:  SEELIHKW
          +  + W
Subjt:  SEELIHKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGGCTGTTTTGTTGCTGGTATCGGCAGCTCTTGTGGGGGCTCAGACGAAGCCGTCGGGGTCACCGTCGTTGTTGGTGACTCAAAGATGGCATGTTCACGTGGTTAATAA
TCTAAACAACAATTTCTTGGATGTGCACTGCAAGTCGAAAGACGATGATTTGGGCTATCAACGCTTGATTCGTGGAGCTGACTTCCAATGGAGCTTTAAAGTTAACTTTT
GGGGAACAACTTTGTTTTGGTGTAACTTACACAAGCCAGGTGCCTATGTCACGTTTGAAGTATTTTGGCCTGAATCAAGGAATGCGTGGCTTCGTAATAGGTGCCATAAT
GGAACTGAAGGACATTGCATTTGGACGGCTAAAGATGATGGAATTTACTTGAGAAATATTCCGGCTAATTCTGAAGAGTTGATTCATAAGTGGATCAGTTTG
mRNA sequenceShow/hide mRNA sequence
GTGGCTGTTTTGTTGCTGGTATCGGCAGCTCTTGTGGGGGCTCAGACGAAGCCGTCGGGGTCACCGTCGTTGTTGGTGACTCAAAGATGGCATGTTCACGTGGTTAATAA
TCTAAACAACAATTTCTTGGATGTGCACTGCAAGTCGAAAGACGATGATTTGGGCTATCAACGCTTGATTCGTGGAGCTGACTTCCAATGGAGCTTTAAAGTTAACTTTT
GGGGAACAACTTTGTTTTGGTGTAACTTACACAAGCCAGGTGCCTATGTCACGTTTGAAGTATTTTGGCCTGAATCAAGGAATGCGTGGCTTCGTAATAGGTGCCATAAT
GGAACTGAAGGACATTGCATTTGGACGGCTAAAGATGATGGAATTTACTTGAGAAATATTCCGGCTAATTCTGAAGAGTTGATTCATAAGTGGATCAGTTTG
Protein sequenceShow/hide protein sequence
VAVLLLVSAALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRLIRGADFQWSFKVNFWGTTLFWCNLHKPGAYVTFEVFWPESRNAWLRNRCHN
GTEGHCIWTAKDDGIYLRNIPANSEELIHKWISL