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MS002497 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002497
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold318:537582..537998
RNA-Seq ExpressionMS002497
SyntenyMS002497
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050599.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]5.1e-5371.43Show/hide
Query:  MGIHKSYILLLVMSLFLSTEL-QVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHD
        MG  KS+I+LLV+S  LSTEL QVS+A FDKFYVHIINGF+NATIGAHCRSKDDDL NQFIPV GEF W+F+TN FGTTLFYCH+WWI G ITY AYWH+
Subjt:  MGIHKSYILLLVMSLFLSTEL-QVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHD

Query:  DGFENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKWQH
        + FE  +C DGHCRWKA+ QGIS + V Q  Y L Y W+H
Subjt:  DGFENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKWQH

KAE8646226.1 hypothetical protein Csa_016670 [Cucumis sativus]3.3e-5275.97Show/hide
Query:  MGIHKSYILLLVMSLFLSTEL-QVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHD
        MGI KSYI+LLV+S+ LS EL QVS ALF+KFYVHIINGF+NATIGAHCRSKDDDLGNQFIPV  EFHWNF+TN  GTTLFYCH+WWI GHITY AYWH+
Subjt:  MGIHKSYILLLVMSLFLSTEL-QVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHD

Query:  DGFENDICRDGHCRWKAEAQGISSFNVRQ
        + FE   C DGHCRWKA+ QG+SS+ V Q
Subjt:  DGFENDICRDGHCRWKAEAQGISSFNVRQ

KAG2712057.1 hypothetical protein I3760_04G107500 [Carya illinoinensis]5.9e-2544.78Show/hide
Query:  SYILLLVMSLFLSTELQVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAY-WHDDGFEN
        S+ L +V++L +   L V+ +L  K++VHIINGF N T+GAHC+SKDDDLG Q IPV G+F W+F  N  G+TLF+C LWW  G   + A+   D  F N
Subjt:  SYILLLVMSLFLSTELQVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAY-WHDDGFEN

Query:  DICRDGHCRWKAEAQGISSFNVRQDVYQLQYKWQ
        + C    C WKA   GI  ++++ + Y+ +Y W+
Subjt:  DICRDGHCRWKAEAQGISSFNVRQDVYQLQYKWQ

XP_031745088.1 S-protein homolog 3-like [Cucumis sativus]3.3e-5275.97Show/hide
Query:  MGIHKSYILLLVMSLFLSTEL-QVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHD
        MGI KSYI+LLV+S+ LS EL QVS ALF+KFYVHIINGF+NATIGAHCRSKDDDLGNQFIPV  EFHWNF+TN  GTTLFYCH+WWI GHITY AYWH+
Subjt:  MGIHKSYILLLVMSLFLSTEL-QVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHD

Query:  DGFENDICRDGHCRWKAEAQGISSFNVRQ
        + FE   C DGHCRWKA+ QG+SS+ V Q
Subjt:  DGFENDICRDGHCRWKAEAQGISSFNVRQ

XP_042974627.1 uncharacterized protein LOC122306260 [Carya illinoinensis]5.9e-2544.78Show/hide
Query:  SYILLLVMSLFLSTELQVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAY-WHDDGFEN
        S+ L +V++L +   L V+ +L  K++VHIINGF N T+GAHC+SKDDDLG Q IPV G+F W+F  N  G+TLF+C LWW  G   + A+   D  F N
Subjt:  SYILLLVMSLFLSTELQVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAY-WHDDGFEN

Query:  DICRDGHCRWKAEAQGISSFNVRQDVYQLQYKWQ
        + C    C WKA   GI  ++++ + Y+ +Y W+
Subjt:  DICRDGHCRWKAEAQGISSFNVRQDVYQLQYKWQ

TrEMBL top hitse value%identityAlignment
A0A061DMI7 S-protein homolog8.3e-2542.54Show/hide
Query:  KSYILLLVMSLFLSTELQVSDALFDKFYVHIINGFN-NATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGFE
        ++ +++LV+ L +S  L V+ ++ ++  VH+INGF+ N T+ AHC+SKDDDLG   IPV GEF W F+T+ F  T F CH+WW  G  T   +W DD F 
Subjt:  KSYILLLVMSLFLSTELQVSDALFDKFYVHIINGFN-NATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGFE

Query:  NDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKW
         + C  G+CRW+++  GI  ++     Y+ +YKW
Subjt:  NDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKW

A0A0A0K4G8 S-protein homolog3.1e-5674.29Show/hide
Query:  MGIHKSYILLLVMSLFLSTEL-QVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHD
        MGI KSYI+LLV+S+ LS EL QVS ALF+KFYVHIINGF+NATIGAHCRSKDDDLGNQFIPV  EFHWNF+TN  GTTLFYCH+WWI GHITY AYWH+
Subjt:  MGIHKSYILLLVMSLFLSTEL-QVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHD

Query:  DGFENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKWQH
        + FE   C DGHCRWKA+ QG+SS+ V Q  Y L Y WQH
Subjt:  DGFENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKWQH

A0A5A7UAS5 S-protein homolog2.5e-5371.43Show/hide
Query:  MGIHKSYILLLVMSLFLSTEL-QVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHD
        MG  KS+I+LLV+S  LSTEL QVS+A FDKFYVHIINGF+NATIGAHCRSKDDDL NQFIPV GEF W+F+TN FGTTLFYCH+WWI G ITY AYWH+
Subjt:  MGIHKSYILLLVMSLFLSTEL-QVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHD

Query:  DGFENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKWQH
        + FE  +C DGHCRWKA+ QGIS + V Q  Y L Y W+H
Subjt:  DGFENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKWQH

A0A5N6QH10 S-protein homolog2.4e-2441.54Show/hide
Query:  LLLVMSLFLSTELQVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGFENDICR
        L+LV+ L++S +   + +L  K+ V + NGF N T+   C+S+DDDLG Q IPV GEF W+F+ N +GTTL++C++WW  GH     +W D+ F  D C 
Subjt:  LLLVMSLFLSTELQVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGFENDICR

Query:  DGHCRWKAEAQGISSFNVRQDVYQLQYKWQ
        D  CRW  +  GI  +  + + Y+LQ +W+
Subjt:  DGHCRWKAEAQGISSFNVRQDVYQLQYKWQ

A0A5N6QIK7 S-protein homolog1.8e-2442.31Show/hide
Query:  LLLVMSLFLSTELQVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGFENDICR
        L+LV+ L++S +   + +L  K+ V I NGF N T+   C+S+DDDLG Q IPV GEF W+F+ N +GTTL++C++WW  GH     +W D+ F  D C 
Subjt:  LLLVMSLFLSTELQVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGFENDICR

Query:  DGHCRWKAEAQGISSFNVRQDVYQLQYKWQ
        D  CRW  +  GI  +  + + Y+LQ +W+
Subjt:  DGHCRWKAEAQGISSFNVRQDVYQLQYKWQ

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 22.7e-1230.77Show/hide
Query:  MGIHKSYILLLVMSLFLSTELQVSDALFD-----------------KFYVHIINGF-NNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYC
        M I K Y+ L ++ +F++T+L  +D   D                 K  V I N   N  T+  HC+SKDDDLGN+ +  G  + ++F    FG TL++C
Subjt:  MGIHKSYILLLVMSLFLSTELQVSDALFD-----------------KFYVHIINGF-NNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYC

Query:  HLWW-IEGHITYLAYWHDDGFENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKW
           W  E H   +   H D   ++ C    C WK    G   FN     + L Y W
Subjt:  HLWW-IEGHITYLAYWHDDGFENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKW

F4JLS0 S-protein homolog 19.5e-1028.86Show/hide
Query:  MGIHKSYILLLVMSLFLSTELQV-------SDALFDK---FYVHIINGFNNA-TIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEG
        M   K ++L +  SL L+ +  V        D +  K   + V ++NG     T+  HC+SK+DDLG   +     F WNF  N+  +T F+C++    G
Subjt:  MGIHKSYILLLVMSLFLSTELQV-------SDALFDK---FYVHIINGFNNA-TIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEG

Query:  HITYLAYWHDDGFENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKWQ
        H+    +W DD      C   +C W A+  G+  +N       L  KW+
Subjt:  HITYLAYWHDDGFENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKWQ

Q2HQ46 S-protein homolog 743.6e-0929.71Show/hide
Query:  YILLLVMSLFLSTELQVSDALFDK---FYVHIINGFNNA-TIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGF
        Y++L      L+ +    D +  K   + V + NG     T+  HC+SK++DLG+  +     F WNF  N+  +TLF+C++   +GH+    +W DD  
Subjt:  YILLLVMSLFLSTELQVSDALFDK---FYVHIINGFNNA-TIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGF

Query:  ENDICRDGHCRWKAEAQGISSFN--VRQDVYQLQYKWQ
            C   +C W A+  G+  +N  + +DV  L  KW+
Subjt:  ENDICRDGHCRWKAEAQGISSFN--VRQDVYQLQYKWQ

Q40975 Self-incompatibility protein S13.8e-1133.58Show/hide
Query:  YILLLVMSLFLSTELQVSDALFDKFYVHIINGFNNA-TIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIE----GHITYLAYWHDDG
        + +++++S FLS     S   F    V I+N   N  +IG HCRSKD+DL NQ +  G +  ++F+ + F TT FYC L W +    G  +Y A   DDG
Subjt:  YILLLVMSLFLSTELQVSDALFDKFYVHIINGFNNA-TIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIE----GHITYLAYWHDDG

Query:  FENDICRDGHCRWKAEAQGISSFNVRQDVYQLQY
             C    C WK    G+  F+    ++Q+ +
Subjt:  FENDICRDGHCRWKAEAQGISSFNVRQDVYQLQY

Q9FMQ4 S-protein homolog 31.6e-0929.93Show/hide
Query:  IHKSYILLLVMSLFLSTELQVSDALFDKFYVHIINGFNNA-TIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHD-D
        +H   I LL+   F   +            V I N   +  T+  HC+S DDDLG + +   G + + F+T++ GTTLFYCH  W      +  Y  D D
Subjt:  IHKSYILLLVMSLFLSTELQVSDALFDKFYVHIINGFNNA-TIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHD-D

Query:  GFENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKW
        G  + I    +C W    QG   F+     + + Y W
Subjt:  GFENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKW

Arabidopsis top hitse value%identityAlignment
AT3G17080.1 Plant self-incompatibility protein S1 family2.8e-0929.29Show/hide
Query:  MGIHKSYILLLVMSLFLSTELQVSDALFDKFYVHIINGFNNA-TIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHL-WWIEGHI-TYLAYW
        MG  ++ +L  VM +F+S  +  +        V I N       +  HC+S++DDLG Q +  G  + + F  ++FG TLFYC   W  E HI       
Subjt:  MGIHKSYILLLVMSLFLSTELQVSDALFDKFYVHIINGFNNA-TIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHL-WWIEGHI-TYLAYW

Query:  HDDGFENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKW
         D  F+   C+   C WK    G   F  +  ++   Y W
Subjt:  HDDGFENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKW

AT4G16195.1 Plant self-incompatibility protein S1 family1.9e-1330.77Show/hide
Query:  MGIHKSYILLLVMSLFLSTELQVSDALFD-----------------KFYVHIINGF-NNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYC
        M I K Y+ L ++ +F++T+L  +D   D                 K  V I N   N  T+  HC+SKDDDLGN+ +  G  + ++F    FG TL++C
Subjt:  MGIHKSYILLLVMSLFLSTELQVSDALFD-----------------KFYVHIINGF-NNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYC

Query:  HLWW-IEGHITYLAYWHDDGFENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKW
           W  E H   +   H D   ++ C    C WK    G   FN     + L Y W
Subjt:  HLWW-IEGHITYLAYWHDDGFENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKW

AT4G16295.1 S-protein homologue 16.7e-1128.86Show/hide
Query:  MGIHKSYILLLVMSLFLSTELQV-------SDALFDK---FYVHIINGFNNA-TIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEG
        M   K ++L +  SL L+ +  V        D +  K   + V ++NG     T+  HC+SK+DDLG   +     F WNF  N+  +T F+C++    G
Subjt:  MGIHKSYILLLVMSLFLSTELQV-------SDALFDK---FYVHIINGFNNA-TIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEG

Query:  HITYLAYWHDDGFENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKWQ
        H+    +W DD      C   +C W A+  G+  +N       L  KW+
Subjt:  HITYLAYWHDDGFENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKWQ

AT4G29035.1 Plant self-incompatibility protein S1 family2.6e-1029.71Show/hide
Query:  YILLLVMSLFLSTELQVSDALFDK---FYVHIINGFNNA-TIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGF
        Y++L      L+ +    D +  K   + V + NG     T+  HC+SK++DLG+  +     F WNF  N+  +TLF+C++   +GH+    +W DD  
Subjt:  YILLLVMSLFLSTELQVSDALFDK---FYVHIINGFNNA-TIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGF

Query:  ENDICRDGHCRWKAEAQGISSFN--VRQDVYQLQYKWQ
            C   +C W A+  G+  +N  + +DV  L  KW+
Subjt:  ENDICRDGHCRWKAEAQGISSFN--VRQDVYQLQYKWQ

AT5G12060.1 Plant self-incompatibility protein S1 family1.1e-1029.93Show/hide
Query:  IHKSYILLLVMSLFLSTELQVSDALFDKFYVHIINGFNNA-TIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHD-D
        +H   I LL+   F   +            V I N   +  T+  HC+S DDDLG + +   G + + F+T++ GTTLFYCH  W      +  Y  D D
Subjt:  IHKSYILLLVMSLFLSTELQVSDALFDKFYVHIINGFNNA-TIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHD-D

Query:  GFENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKW
        G  + I    +C W    QG   F+     + + Y W
Subjt:  GFENDICRDGHCRWKAEAQGISSFNVRQDVYQLQYKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCATCCACAAGAGCTACATTCTCTTGCTCGTAATGTCCCTTTTTTTGAGCACTGAACTACAAGTGAGTGACGCATTGTTTGACAAGTTTTACGTCCACATTATCAA
TGGCTTCAACAACGCAACCATCGGAGCTCATTGCAGGTCGAAAGACGATGATCTAGGCAACCAGTTCATCCCAGTCGGGGGCGAGTTCCATTGGAATTTTAAAACAAATT
TGTTCGGGACGACGTTGTTCTATTGCCATCTATGGTGGATCGAAGGGCACATTACGTACCTAGCGTATTGGCACGACGACGGGTTTGAGAATGATATATGTCGAGATGGA
CATTGCAGATGGAAAGCAGAAGCTCAGGGAATTTCTAGTTTCAATGTTAGGCAAGATGTGTATCAATTGCAATACAAATGGCAACAT
mRNA sequenceShow/hide mRNA sequence
ATGGGCATCCACAAGAGCTACATTCTCTTGCTCGTAATGTCCCTTTTTTTGAGCACTGAACTACAAGTGAGTGACGCATTGTTTGACAAGTTTTACGTCCACATTATCAA
TGGCTTCAACAACGCAACCATCGGAGCTCATTGCAGGTCGAAAGACGATGATCTAGGCAACCAGTTCATCCCAGTCGGGGGCGAGTTCCATTGGAATTTTAAAACAAATT
TGTTCGGGACGACGTTGTTCTATTGCCATCTATGGTGGATCGAAGGGCACATTACGTACCTAGCGTATTGGCACGACGACGGGTTTGAGAATGATATATGTCGAGATGGA
CATTGCAGATGGAAAGCAGAAGCTCAGGGAATTTCTAGTTTCAATGTTAGGCAAGATGTGTATCAATTGCAATACAAATGGCAACAT
Protein sequenceShow/hide protein sequence
MGIHKSYILLLVMSLFLSTELQVSDALFDKFYVHIINGFNNATIGAHCRSKDDDLGNQFIPVGGEFHWNFKTNLFGTTLFYCHLWWIEGHITYLAYWHDDGFENDICRDG
HCRWKAEAQGISSFNVRQDVYQLQYKWQH