; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002498 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002498
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold318:538755..539180
RNA-Seq ExpressionMS002498
SyntenyMS002498
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050599.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]1.9e-3957.78Show/hide
Query:  KSCILWLVIVIFMSSESTQVSEAILDKFYVQIVNGFDNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFI
        KS I+ LVI   +S+E TQVS A  DKFYV I+NGFDN TIGAHCRSKDDDL NQF+ V  +F+WHFR+N FGTTLFYCH+W   G IT+  +W +N F 
Subjt:  KSCILWLVIVIFMSSESTQVSEAILDKFYVQIVNGFDNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFI

Query:  RTKCGDGICRWTVRPDGIYSYNVKDNQYVRQYKWK
         + CGDG CRW   P GI  Y V   +Y   Y W+
Subjt:  RTKCGDGICRWTVRPDGIYSYNVKDNQYVRQYKWK

KAE7997939.1 hypothetical protein FH972_002525 [Carpinus fangiana]6.9e-2947.33Show/hide
Query:  LWLVIVIFMSSESTQVSEAILDKFYVQIVNGFDNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFIRTKC
        L LV++++MS  ST  S  +L K+ V + NGF N+T+   C+S+DDDLG Q + V  +F+WHFR N +GTTL++C++W + GH    VFW DN FI   C
Subjt:  LWLVIVIFMSSESTQVSEAILDKFYVQIVNGFDNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFIRTKC

Query:  GDGICRWTVRPDGIYSYNVKDNQYVRQYKWK
        GD  CRW  + DGIY Y  K N+Y  Q +W+
Subjt:  GDGICRWTVRPDGIYSYNVKDNQYVRQYKWK

KAE7997940.1 hypothetical protein FH972_002526 [Carpinus fangiana]5.2e-2948.09Show/hide
Query:  LWLVIVIFMSSESTQVSEAILDKFYVQIVNGFDNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFIRTKC
        L LV++++MS  ST  S  +L K+ V I NGF N+T+   C+S+DDDLG Q + V  +F+WHFR N +GTTL++C++W + GH    VFW DN FI   C
Subjt:  LWLVIVIFMSSESTQVSEAILDKFYVQIVNGFDNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFIRTKC

Query:  GDGICRWTVRPDGIYSYNVKDNQYVRQYKWK
        GD  CRW  + DGIY Y  K N+Y  Q +W+
Subjt:  GDGICRWTVRPDGIYSYNVKDNQYVRQYKWK

KAE8646226.1 hypothetical protein Csa_016670 [Cucumis sativus]8.6e-4056.83Show/hide
Query:  MRLHKSCILWLVIVIFMSSESTQVSEAILDKFYVQIVNGFDNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDD
        M + KS I+ LVI I +S+E TQVS A+ +KFYV I+NGFDN TIGAHCRSKDDDLGNQF+ V  +F W+FR+N  GTTLFYCH+W   GHIT+  +W +
Subjt:  MRLHKSCILWLVIVIFMSSESTQVSEAILDKFYVQIVNGFDNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDD

Query:  NMFIRTKCGDGICRWTVRPDGIYSYNVKDNQYVRQYKWK
        N F  ++CGDG CRW   P G+ SY V D + +    WK
Subjt:  NMFIRTKCGDGICRWTVRPDGIYSYNVKDNQYVRQYKWK

XP_031745088.1 S-protein homolog 3-like [Cucumis sativus]8.6e-4056.83Show/hide
Query:  MRLHKSCILWLVIVIFMSSESTQVSEAILDKFYVQIVNGFDNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDD
        M + KS I+ LVI I +S+E TQVS A+ +KFYV I+NGFDN TIGAHCRSKDDDLGNQF+ V  +F W+FR+N  GTTLFYCH+W   GHIT+  +W +
Subjt:  MRLHKSCILWLVIVIFMSSESTQVSEAILDKFYVQIVNGFDNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDD

Query:  NMFIRTKCGDGICRWTVRPDGIYSYNVKDNQYVRQYKWK
        N F  ++CGDG CRW   P G+ SY V D + +    WK
Subjt:  NMFIRTKCGDGICRWTVRPDGIYSYNVKDNQYVRQYKWK

TrEMBL top hitse value%identityAlignment
A0A061DMI7 S-protein homolog2.2e-2542.75Show/hide
Query:  LWLVIVIFMSSESTQVSEAILDKFYVQIVNGFD-NETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFIRTK
        L +++V+ +    + V+ +I+++  V ++NGF  NET+ AHC+SKDDDLG   + V  +F+W FR++ F  T F CH+W + G  T  VFW D+ FI  +
Subjt:  LWLVIVIFMSSESTQVSEAILDKFYVQIVNGFD-NETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFIRTK

Query:  CGDGICRWTVRPDGIYSYNVKDNQYVRQYKW
        CG G CRW  + DGIY Y+    QY  +YKW
Subjt:  CGDGICRWTVRPDGIYSYNVKDNQYVRQYKW

A0A0A0K4G8 S-protein homolog1.7e-4156.83Show/hide
Query:  MRLHKSCILWLVIVIFMSSESTQVSEAILDKFYVQIVNGFDNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDD
        M + KS I+ LVI I +S+E TQVS A+ +KFYV I+NGFDN TIGAHCRSKDDDLGNQF+ V  +F W+FR+N  GTTLFYCH+W   GHIT+  +W +
Subjt:  MRLHKSCILWLVIVIFMSSESTQVSEAILDKFYVQIVNGFDNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDD

Query:  NMFIRTKCGDGICRWTVRPDGIYSYNVKDNQYVRQYKWK
        N F  ++CGDG CRW   P G+ SY V   +Y   Y W+
Subjt:  NMFIRTKCGDGICRWTVRPDGIYSYNVKDNQYVRQYKWK

A0A5A7UAS5 S-protein homolog9.3e-4057.78Show/hide
Query:  KSCILWLVIVIFMSSESTQVSEAILDKFYVQIVNGFDNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFI
        KS I+ LVI   +S+E TQVS A  DKFYV I+NGFDN TIGAHCRSKDDDL NQF+ V  +F+WHFR+N FGTTLFYCH+W   G IT+  +W +N F 
Subjt:  KSCILWLVIVIFMSSESTQVSEAILDKFYVQIVNGFDNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFI

Query:  RTKCGDGICRWTVRPDGIYSYNVKDNQYVRQYKWK
         + CGDG CRW   P GI  Y V   +Y   Y W+
Subjt:  RTKCGDGICRWTVRPDGIYSYNVKDNQYVRQYKWK

A0A5N6QH10 S-protein homolog3.3e-2947.33Show/hide
Query:  LWLVIVIFMSSESTQVSEAILDKFYVQIVNGFDNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFIRTKC
        L LV++++MS  ST  S  +L K+ V + NGF N+T+   C+S+DDDLG Q + V  +F+WHFR N +GTTL++C++W + GH    VFW DN FI   C
Subjt:  LWLVIVIFMSSESTQVSEAILDKFYVQIVNGFDNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFIRTKC

Query:  GDGICRWTVRPDGIYSYNVKDNQYVRQYKWK
        GD  CRW  + DGIY Y  K N+Y  Q +W+
Subjt:  GDGICRWTVRPDGIYSYNVKDNQYVRQYKWK

A0A5N6QIK7 S-protein homolog2.5e-2948.09Show/hide
Query:  LWLVIVIFMSSESTQVSEAILDKFYVQIVNGFDNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFIRTKC
        L LV++++MS  ST  S  +L K+ V I NGF N+T+   C+S+DDDLG Q + V  +F+WHFR N +GTTL++C++W + GH    VFW DN FI   C
Subjt:  LWLVIVIFMSSESTQVSEAILDKFYVQIVNGFDNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFIRTKC

Query:  GDGICRWTVRPDGIYSYNVKDNQYVRQYKWK
        GD  CRW  + DGIY Y  K N+Y  Q +W+
Subjt:  GDGICRWTVRPDGIYSYNVKDNQYVRQYKWK

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 29.7e-1034.51Show/hide
Query:  VQIVNGFDNE-TIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHL-WRTQGHITFLVFWD------DNMFIRTKCGDGICRWTVRPDGIYSY
        V+I N   N+ T+  HC+SKDDDLGN+ L  G  + + F    FG TL++C   W  + H +F ++ D      DN     KC    C W +R +G   +
Subjt:  VQIVNGFDNE-TIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHL-WRTQGHITFLVFWD------DNMFIRTKCGDGICRWTVRPDGIYSY

Query:  NVKDNQYVRQYKW
        N +  Q+   Y W
Subjt:  NVKDNQYVRQYKW

F4JLS0 S-protein homolog 14.8e-1736.61Show/hide
Query:  LDKFYVQIVNGF-DNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFIRTKCGDGICRWTVRPDGIYSYNV
        + ++ V +VNG    ET+  HC+SK+DDLG   L     F W+F  N+  +T F+C++ +  GH+   VFWDD + +  +CG   C WT + DG+Y +N 
Subjt:  LDKFYVQIVNGF-DNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFIRTKCGDGICRWTVRPDGIYSYNV

Query:  KDNQYVRQYKWK
           + V   KW+
Subjt:  KDNQYVRQYKWK

Q2HQ46 S-protein homolog 741.5e-1535.71Show/hide
Query:  LDKFYVQIVNGF-DNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFIRTKCGDGICRWTVRPDGIYSYNV
        + ++ V + NG    ET+  HC+SK++DLG+  L     F W+F  N+  +TLF+C++ +  GH+   VFWDD + +  +C    C WT + DG+Y +N 
Subjt:  LDKFYVQIVNGF-DNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFIRTKCGDGICRWTVRPDGIYSYNV

Query:  KDNQYVRQYKWK
           + V   KWK
Subjt:  KDNQYVRQYKWK

Q40975 Self-incompatibility protein S12.2e-0934.75Show/hide
Query:  VIFMSSESTQVSEAILDKFYVQIVNGFDN-ETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHL-WRTQ---GHITFLVFWDDNMFIRTKC
        VI + S     S        V+I+N   N  +IG HCRSKD+DL NQ ++ G D  + FR + F TT FYC L W  +   G  ++    DD+     +C
Subjt:  VIFMSSESTQVSEAILDKFYVQIVNGFDN-ETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHL-WRTQ---GHITFLVFWDDNMFIRTKC

Query:  GDGICRWTVRPDGIYSYN
            C W +  DG+Y ++
Subjt:  GDGICRWTVRPDGIYSYN

Q9FMQ4 S-protein homolog 33.3e-1031.58Show/hide
Query:  ILWLVIVIFMSSESTQVSEAILDKFYVQIVNGF-DNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHL-WRTQGHITFLVFWDDNMFIR
        +++L+I I  S   T           V+I N   D  T+  HC+S DDDLG + L+    + + FR++I GTTLFYCH  W  Q    F ++ DD   +R
Subjt:  ILWLVIVIFMSSESTQVSEAILDKFYVQIVNGF-DNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHL-WRTQGHITFLVFWDDNMFIR

Query:  TKCGDGICRWTVRPDGIYSYNVKDNQYVRQYKW
        +      C W +   G   ++  D+ +   Y W
Subjt:  TKCGDGICRWTVRPDGIYSYNVKDNQYVRQYKW

Arabidopsis top hitse value%identityAlignment
AT3G17080.1 Plant self-incompatibility protein S1 family2.5e-1331.11Show/hide
Query:  KSCILWLVIVIFMSSESTQVSEAILDKFYVQIVNGFDNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHL-WRTQGHITFLVFWDDNMF
        ++C+L+ V+V+FMS+  ++ S +++   Y  +  G     +  HC+S++DDLG Q L+ GR + + F  +IFG TLFYC   W  + HI F ++      
Subjt:  KSCILWLVIVIFMSSESTQVSEAILDKFYVQIVNGFDNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHL-WRTQGHITFLVFWDDNMF

Query:  IRTKCGDGICRWTVRPDGIYSYNVKDNQYVRQYKW
           + G   C W +R +G   +  K   +   Y W
Subjt:  IRTKCGDGICRWTVRPDGIYSYNVKDNQYVRQYKW

AT4G16195.1 Plant self-incompatibility protein S1 family6.9e-1134.51Show/hide
Query:  VQIVNGFDNE-TIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHL-WRTQGHITFLVFWD------DNMFIRTKCGDGICRWTVRPDGIYSY
        V+I N   N+ T+  HC+SKDDDLGN+ L  G  + + F    FG TL++C   W  + H +F ++ D      DN     KC    C W +R +G   +
Subjt:  VQIVNGFDNE-TIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHL-WRTQGHITFLVFWD------DNMFIRTKCGDGICRWTVRPDGIYSY

Query:  NVKDNQYVRQYKW
        N +  Q+   Y W
Subjt:  NVKDNQYVRQYKW

AT4G16295.1 S-protein homologue 13.4e-1836.61Show/hide
Query:  LDKFYVQIVNGF-DNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFIRTKCGDGICRWTVRPDGIYSYNV
        + ++ V +VNG    ET+  HC+SK+DDLG   L     F W+F  N+  +T F+C++ +  GH+   VFWDD + +  +CG   C WT + DG+Y +N 
Subjt:  LDKFYVQIVNGF-DNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFIRTKCGDGICRWTVRPDGIYSYNV

Query:  KDNQYVRQYKWK
           + V   KW+
Subjt:  KDNQYVRQYKWK

AT4G29035.1 Plant self-incompatibility protein S1 family1.1e-1635.71Show/hide
Query:  LDKFYVQIVNGF-DNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFIRTKCGDGICRWTVRPDGIYSYNV
        + ++ V + NG    ET+  HC+SK++DLG+  L     F W+F  N+  +TLF+C++ +  GH+   VFWDD + +  +C    C WT + DG+Y +N 
Subjt:  LDKFYVQIVNGF-DNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFIRTKCGDGICRWTVRPDGIYSYNV

Query:  KDNQYVRQYKWK
           + V   KWK
Subjt:  KDNQYVRQYKWK

AT5G12060.1 Plant self-incompatibility protein S1 family2.4e-1131.58Show/hide
Query:  ILWLVIVIFMSSESTQVSEAILDKFYVQIVNGF-DNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHL-WRTQGHITFLVFWDDNMFIR
        +++L+I I  S   T           V+I N   D  T+  HC+S DDDLG + L+    + + FR++I GTTLFYCH  W  Q    F ++ DD   +R
Subjt:  ILWLVIVIFMSSESTQVSEAILDKFYVQIVNGF-DNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHL-WRTQGHITFLVFWDDNMFIR

Query:  TKCGDGICRWTVRPDGIYSYNVKDNQYVRQYKW
        +      C W +   G   ++  D+ +   Y W
Subjt:  TKCGDGICRWTVRPDGIYSYNVKDNQYVRQYKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAGCAGCCATGAGGCTTCATAAGAGCTGCATTCTGTGGCTAGTGATAGTCATTTTTATGAGTAGTGAATCAACACAGGTAAGTGAGGCAATTCTCGATAAGTTTTACGT
GCAAATTGTCAACGGCTTTGACAACGAAACCATCGGGGCACATTGTAGGTCGAAAGACGATGACCTAGGGAATCAATTTCTCTCGGTTGGACGAGATTTTCGATGGCATT
TTCGATCAAATATATTTGGGACGACACTGTTCTATTGTCACCTATGGCGGACCCAAGGGCACATTACATTCTTAGTGTTTTGGGATGACAACATGTTTATAAGAACTAAG
TGTGGAGATGGCATTTGTCGATGGACAGTCCGACCAGATGGAATTTATAGCTATAATGTTAAGGACAATCAATATGTTCGACAGTACAAATGGAAA
mRNA sequenceShow/hide mRNA sequence
GCAGCAGCCATGAGGCTTCATAAGAGCTGCATTCTGTGGCTAGTGATAGTCATTTTTATGAGTAGTGAATCAACACAGGTAAGTGAGGCAATTCTCGATAAGTTTTACGT
GCAAATTGTCAACGGCTTTGACAACGAAACCATCGGGGCACATTGTAGGTCGAAAGACGATGACCTAGGGAATCAATTTCTCTCGGTTGGACGAGATTTTCGATGGCATT
TTCGATCAAATATATTTGGGACGACACTGTTCTATTGTCACCTATGGCGGACCCAAGGGCACATTACATTCTTAGTGTTTTGGGATGACAACATGTTTATAAGAACTAAG
TGTGGAGATGGCATTTGTCGATGGACAGTCCGACCAGATGGAATTTATAGCTATAATGTTAAGGACAATCAATATGTTCGACAGTACAAATGGAAA
Protein sequenceShow/hide protein sequence
AAAMRLHKSCILWLVIVIFMSSESTQVSEAILDKFYVQIVNGFDNETIGAHCRSKDDDLGNQFLSVGRDFRWHFRSNIFGTTLFYCHLWRTQGHITFLVFWDDNMFIRTK
CGDGICRWTVRPDGIYSYNVKDNQYVRQYKWK