; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002499 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002499
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold318:540943..541368
RNA-Seq ExpressionMS002499
SyntenyMS002499
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOX94034.1 Uncharacterized protein TCM_003121 [Theobroma cacao]8.4e-2744.96Show/hide
Query:  LVITIFLSIELTQVSEAVLDKFYVRVINNFN-NETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFIRNKCG
        +++ + L +  + V+ +++++  V VIN F+ NET+  HC SKD+DLG   + V  +FQW FR++FF  TRF+CH+W S    T  VFW D+KFI N+CG
Subjt:  LVITIFLSIELTQVSEAVLDKFYVRVINNFN-NETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFIRNKCG

Query:  DGICRWIARPDGIYTYMYVDNQYERQYSW
         G CRW ++ DGIY Y +V  QY  +Y W
Subjt:  DGICRWIARPDGIYTYMYVDNQYERQYSW

KAA0050599.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]7.1e-3451.8Show/hide
Query:  MRHHKSCIFFLVITIFLSIELTQVSEAVLDKFYVRVINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDD
        M + KS I  LVI+  LS ELTQVS A  DKFYV +IN F+N TIG HC SKD+DL   F+ V  +FQWHFR+NFFGTT F CH+W      T+  +W +
Subjt:  MRHHKSCIFFLVITIFLSIELTQVSEAVLDKFYVRVINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDD

Query:  NKFIRNKCGDGICRWIARPDGIYTYMYVDNQYERQYSWK
        N F  + CGDG CRW A P GI  Y     +Y   Y W+
Subjt:  NKFIRNKCGDGICRWIARPDGIYTYMYVDNQYERQYSWK

KAE7997939.1 hypothetical protein FH972_002525 [Carpinus fangiana]2.1e-2541.73Show/hide
Query:  MRHHKSCIFFLVITIFLSIELTQVSEAVLDKFYVRVINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDD
        M H       LV+ +++S   T  S  +L K+ V V N F N+T+ + C S+D+DLG   + V  +FQWHFR N++GTT + C++W S  +    VFW D
Subjt:  MRHHKSCIFFLVITIFLSIELTQVSEAVLDKFYVRVINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDD

Query:  NKFIRNKCGDGICRWIARPDGIYTYMYVDNQYERQYSWK
        NKFI + CGD  CRW+ + DGIY Y+   N+Y  Q  W+
Subjt:  NKFIRNKCGDGICRWIARPDGIYTYMYVDNQYERQYSWK

KAE8646226.1 hypothetical protein Csa_016670 [Cucumis sativus]7.8e-3351.85Show/hide
Query:  KSCIFFLVITIFLSIELTQVSEAVLDKFYVRVINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFI
        KS I  LVI+I LS ELTQVS A+ +KFYV +IN F+N TIG HC SKD+DLG  F+ V  +F W+FR+NF GTT F CH+W    + T+  +W +N F 
Subjt:  KSCIFFLVITIFLSIELTQVSEAVLDKFYVRVINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFI

Query:  RNKCGDGICRWIARPDGIYTYMYVDNQYERQYSWK
         ++CGDG CRW A P G+ +Y +VD +     SWK
Subjt:  RNKCGDGICRWIARPDGIYTYMYVDNQYERQYSWK

XP_031745088.1 S-protein homolog 3-like [Cucumis sativus]7.8e-3351.85Show/hide
Query:  KSCIFFLVITIFLSIELTQVSEAVLDKFYVRVINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFI
        KS I  LVI+I LS ELTQVS A+ +KFYV +IN F+N TIG HC SKD+DLG  F+ V  +F W+FR+NF GTT F CH+W    + T+  +W +N F 
Subjt:  KSCIFFLVITIFLSIELTQVSEAVLDKFYVRVINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFI

Query:  RNKCGDGICRWIARPDGIYTYMYVDNQYERQYSWK
         ++CGDG CRW A P G+ +Y +VD +     SWK
Subjt:  RNKCGDGICRWIARPDGIYTYMYVDNQYERQYSWK

TrEMBL top hitse value%identityAlignment
A0A061DMI7 S-protein homolog4.1e-2744.96Show/hide
Query:  LVITIFLSIELTQVSEAVLDKFYVRVINNFN-NETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFIRNKCG
        +++ + L +  + V+ +++++  V VIN F+ NET+  HC SKD+DLG   + V  +FQW FR++FF  TRF+CH+W S    T  VFW D+KFI N+CG
Subjt:  LVITIFLSIELTQVSEAVLDKFYVRVINNFN-NETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFIRNKCG

Query:  DGICRWIARPDGIYTYMYVDNQYERQYSW
         G CRW ++ DGIY Y +V  QY  +Y W
Subjt:  DGICRWIARPDGIYTYMYVDNQYERQYSW

A0A0A0K4G8 S-protein homolog7.6e-3450.37Show/hide
Query:  KSCIFFLVITIFLSIELTQVSEAVLDKFYVRVINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFI
        KS I  LVI+I LS ELTQVS A+ +KFYV +IN F+N TIG HC SKD+DLG  F+ V  +F W+FR+NF GTT F CH+W    + T+  +W +N F 
Subjt:  KSCIFFLVITIFLSIELTQVSEAVLDKFYVRVINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFI

Query:  RNKCGDGICRWIARPDGIYTYMYVDNQYERQYSWK
         ++CGDG CRW A P G+ +Y     +Y   Y W+
Subjt:  RNKCGDGICRWIARPDGIYTYMYVDNQYERQYSWK

A0A5A7UAS5 S-protein homolog3.4e-3451.8Show/hide
Query:  MRHHKSCIFFLVITIFLSIELTQVSEAVLDKFYVRVINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDD
        M + KS I  LVI+  LS ELTQVS A  DKFYV +IN F+N TIG HC SKD+DL   F+ V  +FQWHFR+NFFGTT F CH+W      T+  +W +
Subjt:  MRHHKSCIFFLVITIFLSIELTQVSEAVLDKFYVRVINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDD

Query:  NKFIRNKCGDGICRWIARPDGIYTYMYVDNQYERQYSWK
        N F  + CGDG CRW A P GI  Y     +Y   Y W+
Subjt:  NKFIRNKCGDGICRWIARPDGIYTYMYVDNQYERQYSWK

A0A5N6QH10 S-protein homolog1.0e-2541.73Show/hide
Query:  MRHHKSCIFFLVITIFLSIELTQVSEAVLDKFYVRVINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDD
        M H       LV+ +++S   T  S  +L K+ V V N F N+T+ + C S+D+DLG   + V  +FQWHFR N++GTT + C++W S  +    VFW D
Subjt:  MRHHKSCIFFLVITIFLSIELTQVSEAVLDKFYVRVINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDD

Query:  NKFIRNKCGDGICRWIARPDGIYTYMYVDNQYERQYSWK
        NKFI + CGD  CRW+ + DGIY Y+   N+Y  Q  W+
Subjt:  NKFIRNKCGDGICRWIARPDGIYTYMYVDNQYERQYSWK

A0A5N6QIK7 S-protein homolog1.3e-2541.01Show/hide
Query:  MRHHKSCIFFLVITIFLSIELTQVSEAVLDKFYVRVINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDD
        M H       LV+ +++S   T  S  +L K+ V + N F N+T+ + C S+D+DLG   + V  +FQWHFR N++GTT + C++W S  +    VFW D
Subjt:  MRHHKSCIFFLVITIFLSIELTQVSEAVLDKFYVRVINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDD

Query:  NKFIRNKCGDGICRWIARPDGIYTYMYVDNQYERQYSWK
        NKFI + CGD  CRW+ + DGIY Y+   N+Y  Q  W+
Subjt:  NKFIRNKCGDGICRWIARPDGIYTYMYVDNQYERQYSWK

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 61.8e-0835.92Show/hide
Query:  VINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFIRNKCGDGICRWIARPDGIYTYMYVDNQYERQ
        VI N N+  +GVHC S+D+D G   L  G  + W F  NF  +T + C    SQ      VF D  K +R+      C W A+ DGIY Y  +  +    
Subjt:  VINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFIRNKCGDGICRWIARPDGIYTYMYVDNQYERQ

Query:  YSW
        Y W
Subjt:  YSW

F4JLS0 S-protein homolog 11.3e-1130.36Show/hide
Query:  LDKFYVRVINNF-NNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFIRNKCGDGICRWIARPDGIYTYMY
        + ++ V V+N     ET+ +HC SK++DLG+  L     F W+F  N   +T F C++ +   +    VFWDD   + ++CG   C W A+ DG+Y +  
Subjt:  LDKFYVRVINNF-NNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFIRNKCGDGICRWIARPDGIYTYMY

Query:  VDNQYERQYSWK
           +      W+
Subjt:  VDNQYERQYSWK

P0DN92 S-protein homolog 241.4e-0834.13Show/hide
Query:  CIFFLVITIFLSI---ELTQVSEA--VLDKFYVRV-INNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQ-SYATFAVFWD
        C  F+V  + +S+   E  Q+ EA   +     RV I N N+  +G+HC S+D+DLG   L+ G+ F W F  NF  +T + C   + Q     F ++  
Subjt:  CIFFLVITIFLSI---ELTQVSEA--VLDKFYVRV-INNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQ-SYATFAVFWD

Query:  DNKFIRNKCGDGICRWIARPDGIYTY
        +  F R  C +  C W A  DGIY Y
Subjt:  DNKFIRNKCGDGICRWIARPDGIYTY

Q2HQ46 S-protein homolog 748.7e-1131.25Show/hide
Query:  LDKFYVRVINNF-NNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFIRNKCGDGICRWIARPDGIYTYMY
        + ++ V V N     ET+ +HC SK+NDLG   L     F W+F  N   +T F C++ +   +    VFWDD   + ++C    C W A+ DG+Y +  
Subjt:  LDKFYVRVINNF-NNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFIRNKCGDGICRWIARPDGIYTYMY

Query:  VDNQYERQYSWK
           +      WK
Subjt:  VDNQYERQYSWK

Q9LW22 S-protein homolog 212.8e-0929.69Show/hide
Query:  ITIFL-SIELTQVSEAVLDKFYVRV---INNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFIRNKC
        ++IFL  + L  +S+    K  + V   +N  N   + VHC SK+ND+G  +L +G+   + F++NF+GTT F C+L++   Y  +              
Subjt:  ITIFL-SIELTQVSEAVLDKFYVRV---INNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFIRNKC

Query:  GDGICRWIARPDGIYTYMYVDNQYERQY
              W+AR DGIY +      Y + Y
Subjt:  GDGICRWIARPDGIYTYMYVDNQYERQY

Arabidopsis top hitse value%identityAlignment
AT3G26880.1 Plant self-incompatibility protein S1 family2.0e-1029.69Show/hide
Query:  ITIFL-SIELTQVSEAVLDKFYVRV---INNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFIRNKC
        ++IFL  + L  +S+    K  + V   +N  N   + VHC SK+ND+G  +L +G+   + F++NF+GTT F C+L++   Y  +              
Subjt:  ITIFL-SIELTQVSEAVLDKFYVRV---INNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFIRNKC

Query:  GDGICRWIARPDGIYTYMYVDNQYERQY
              W+AR DGIY +      Y + Y
Subjt:  GDGICRWIARPDGIYTYMYVDNQYERQY

AT4G16295.1 S-protein homologue 19.6e-1330.36Show/hide
Query:  LDKFYVRVINNF-NNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFIRNKCGDGICRWIARPDGIYTYMY
        + ++ V V+N     ET+ +HC SK++DLG+  L     F W+F  N   +T F C++ +   +    VFWDD   + ++CG   C W A+ DG+Y +  
Subjt:  LDKFYVRVINNF-NNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFIRNKCGDGICRWIARPDGIYTYMY

Query:  VDNQYERQYSWK
           +      W+
Subjt:  VDNQYERQYSWK

AT4G29035.1 Plant self-incompatibility protein S1 family6.2e-1231.25Show/hide
Query:  LDKFYVRVINNF-NNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFIRNKCGDGICRWIARPDGIYTYMY
        + ++ V V N     ET+ +HC SK+NDLG   L     F W+F  N   +T F C++ +   +    VFWDD   + ++C    C W A+ DG+Y +  
Subjt:  LDKFYVRVINNF-NNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFIRNKCGDGICRWIARPDGIYTYMY

Query:  VDNQYERQYSWK
           +      WK
Subjt:  VDNQYERQYSWK

AT5G04347.1 Plant self-incompatibility protein S1 family2.0e-1031.3Show/hide
Query:  IFFLVITIFLSIELTQVSEAVLDKFYVRVINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFIRNK
        +F  VI + + I  T     +L K      N  NN+ +GV C SKD++LG   L VGQ  + +F  N +  T F C+LW+   +     F       +  
Subjt:  IFFLVITIFLSIELTQVSEAVLDKFYVRVINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFIRNK

Query:  CGDGICRWIARPDGIYTYMYVDNQYERQYSW
         G     WIAR DGIY   + +   +++Y W
Subjt:  CGDGICRWIARPDGIYTYMYVDNQYERQYSW

AT5G04350.1 Plant self-incompatibility protein S1 family1.7e-0928.69Show/hide
Query:  IFFLVITIFLSIELTQVSEAVLDKFYVRVINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQS------YATFAVFWDDN
        +F   I I L I ++     + +   V      +++ + VHC SKD+DLG+  L +GQD+++ F  N + TT F+C + +  +      +  +   W   
Subjt:  IFFLVITIFLSIELTQVSEAVLDKFYVRVINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQS------YATFAVFWDDN

Query:  KFIRNKCGDGICRWIARPDGIY
            +K  +  C+WI R DGIY
Subjt:  KFIRNKCGDGICRWIARPDGIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTAGAAGCTATGAGGCATCATAAGAGCTGCATTTTCTTCCTAGTGATAACCATTTTTCTGAGTATTGAATTAACACAAGTAAGTGAGGCAGTTTTAGATAAGTTTTACGT
GCGAGTCATCAACAACTTCAACAACGAAACCATCGGAGTGCATTGCTGGTCGAAAGATAACGACCTCGGGAAAACGTTCCTCTCGGTTGGACAAGATTTTCAATGGCATT
TTAGATCAAATTTCTTTGGGACGACACGCTTCACTTGTCACCTATGGCGAAGCCAATCATACGCTACATTCGCAGTGTTTTGGGATGACAACAAGTTTATAAGAAATAAG
TGTGGGGATGGCATATGTCGATGGATTGCTCGACCTGATGGAATTTATACCTACATGTATGTGGACAATCAATATGAGCGTCAATACTCATGGAAA
mRNA sequenceShow/hide mRNA sequence
GTAGAAGCTATGAGGCATCATAAGAGCTGCATTTTCTTCCTAGTGATAACCATTTTTCTGAGTATTGAATTAACACAAGTAAGTGAGGCAGTTTTAGATAAGTTTTACGT
GCGAGTCATCAACAACTTCAACAACGAAACCATCGGAGTGCATTGCTGGTCGAAAGATAACGACCTCGGGAAAACGTTCCTCTCGGTTGGACAAGATTTTCAATGGCATT
TTAGATCAAATTTCTTTGGGACGACACGCTTCACTTGTCACCTATGGCGAAGCCAATCATACGCTACATTCGCAGTGTTTTGGGATGACAACAAGTTTATAAGAAATAAG
TGTGGGGATGGCATATGTCGATGGATTGCTCGACCTGATGGAATTTATACCTACATGTATGTGGACAATCAATATGAGCGTCAATACTCATGGAAA
Protein sequenceShow/hide protein sequence
VEAMRHHKSCIFFLVITIFLSIELTQVSEAVLDKFYVRVINNFNNETIGVHCWSKDNDLGKTFLSVGQDFQWHFRSNFFGTTRFTCHLWRSQSYATFAVFWDDNKFIRNK
CGDGICRWIARPDGIYTYMYVDNQYERQYSWK