; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002500 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002500
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold318:541959..542378
RNA-Seq ExpressionMS002500
SyntenyMS002500
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050608.1 leguminosin group486 secreted peptide [Cucumis melo var. makuwa]4.4e-4460.14Show/hide
Query:  LFVLLLSLTLT-SSISFESKGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKK-----YNGISSAFK
        L +L+LS TLT  S+  E+K ++FP FIRWHV VIN LN ++ + VHC+SQDDDLGL +LPP AN +WSF  N   STLFWCRL+K     + G+ +AFK
Subjt:  LFVLLLSLTLT-SSISFESKGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKK-----YNGISSAFK

Query:  VFWTNPQLFDKCGWKNCIWIAKDDGIYIRDFANRLDQIYYSWE
        VFW + +LF+KCGWKNCIWIAKD GIYIR+FA  +DQ+ Y WE
Subjt:  VFWTNPQLFDKCGWKNCIWIAKDDGIYIRDFANRLDQIYYSWE

KAE8646226.1 hypothetical protein Csa_016670 [Cucumis sativus]3.3e-4461.76Show/hide
Query:  SLTLTSSISFESKGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNG-----ISSAFKVFWTNPQ
        +LTL  S+  E+K ++FP FIRWHV VIN LN ++ + VHC+SQDDDLGL +LPP AN TWSF  N   STLFWCRL+K  G     + +AFKVFW + +
Subjt:  SLTLTSSISFESKGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNG-----ISSAFKVFWTNPQ

Query:  LFDKCGWKNCIWIAKDDGIYIRDFANRLDQIYYSWE
        LFDKCGWKNCIW+AKDDGIYIR+FA  +DQ+ Y+WE
Subjt:  LFDKCGWKNCIWIAKDDGIYIRDFANRLDQIYYSWE

KAG7014486.1 S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-4562.2Show/hide
Query:  SFESKGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKK----YNGISSAFKVFWTNPQLFDKCGWKN
        +F++KGS+FP FIRWHV V NGLN  E + VHC+SQDDDLGLH+LPP A+F+WSF  N   +TLFWCRL+K      G+ +AFKVFW + +LF+KCGWKN
Subjt:  SFESKGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKK----YNGISSAFKVFWTNPQLFDKCGWKN

Query:  CIWIAKDDGIYIRDFANRLDQIYYSWE
        C+WIAKDDGIYI++FA  +D++ Y+WE
Subjt:  CIWIAKDDGIYIRDFANRLDQIYYSWE

RXH87166.1 hypothetical protein DVH24_028666 [Malus domestica]1.0e-4055Show/hide
Query:  IHLFVLLLSLTLTSSISFES-KGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFW
        IH+ VL  ++ ++ S+ F S KG +FP F +WHV+V+NGL   E L+VHC+S+D+DLG+ +L P  N TW F TN L STLFWC L+K +   +A KVFW
Subjt:  IHLFVLLLSLTLTSSISFES-KGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFW

Query:  TNPQLFDKCGWKNCIWIAKDDGIYIRDFANRLDQIYYSWE
         +  LF+KC WKNCIWIAKDDGIYI+DFAN  D+    WE
Subjt:  TNPQLFDKCGWKNCIWIAKDDGIYIRDFANRLDQIYYSWE

XP_031744194.1 S-protein homolog 1-like [Cucumis sativus]1.8e-4560.69Show/hide
Query:  IHLFVLLLSLTLT-SSISFESKGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNG-----ISSA
        I+  +L+LS TLT  S+  E+K ++FP FIRWHV VIN LN ++ + VHC+SQDDDLGL +LPP AN TWSF  N   STLFWCRL+K  G     + +A
Subjt:  IHLFVLLLSLTLT-SSISFESKGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNG-----ISSA

Query:  FKVFWTNPQLFDKCGWKNCIWIAKDDGIYIRDFANRLDQIYYSWE
        FKVFW + +LFDKCGWKNCIW+AKDDGIYIR+FA  +DQ+ Y+WE
Subjt:  FKVFWTNPQLFDKCGWKNCIWIAKDDGIYIRDFANRLDQIYYSWE

TrEMBL top hitse value%identityAlignment
A0A0A0K6N5 S-protein homolog8.6e-4660.69Show/hide
Query:  IHLFVLLLSLTLT-SSISFESKGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNG-----ISSA
        I+  +L+LS TLT  S+  E+K ++FP FIRWHV VIN LN ++ + VHC+SQDDDLGL +LPP AN TWSF  N   STLFWCRL+K  G     + +A
Subjt:  IHLFVLLLSLTLT-SSISFESKGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNG-----ISSA

Query:  FKVFWTNPQLFDKCGWKNCIWIAKDDGIYIRDFANRLDQIYYSWE
        FKVFW + +LFDKCGWKNCIW+AKDDGIYIR+FA  +DQ+ Y+WE
Subjt:  FKVFWTNPQLFDKCGWKNCIWIAKDDGIYIRDFANRLDQIYYSWE

A0A498IV86 Uncharacterized protein4.9e-4155Show/hide
Query:  IHLFVLLLSLTLTSSISFES-KGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFW
        IH+ VL  ++ ++ S+ F S KG +FP F +WHV+V+NGL   E L+VHC+S+D+DLG+ +L P  N TW F TN L STLFWC L+K +   +A KVFW
Subjt:  IHLFVLLLSLTLTSSISFES-KGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFW

Query:  TNPQLFDKCGWKNCIWIAKDDGIYIRDFANRLDQIYYSWE
         +  LF+KC WKNCIWIAKDDGIYI+DFAN  D+    WE
Subjt:  TNPQLFDKCGWKNCIWIAKDDGIYIRDFANRLDQIYYSWE

A0A540KDH9 S-protein homolog6.4e-4155Show/hide
Query:  IHLFVLLLSLTLTSSISFES-KGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFW
        IH+ VL  ++ ++ S+ F S KG +FP F +WHV+V+NGL   E L+VHC+S+D+DLG+  L P  N TW F TN L STLFWC L+K +   +A KVFW
Subjt:  IHLFVLLLSLTLTSSISFES-KGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFW

Query:  TNPQLFDKCGWKNCIWIAKDDGIYIRDFANRLDQIYYSWE
         +  LF+KC WKNCIWIAKDDGIYI+DFAN  D+    WE
Subjt:  TNPQLFDKCGWKNCIWIAKDDGIYIRDFANRLDQIYYSWE

A0A5A7U5Q7 S-protein homolog2.1e-4460.14Show/hide
Query:  LFVLLLSLTLT-SSISFESKGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKK-----YNGISSAFK
        L +L+LS TLT  S+  E+K ++FP FIRWHV VIN LN ++ + VHC+SQDDDLGL +LPP AN +WSF  N   STLFWCRL+K     + G+ +AFK
Subjt:  LFVLLLSLTLT-SSISFESKGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKK-----YNGISSAFK

Query:  VFWTNPQLFDKCGWKNCIWIAKDDGIYIRDFANRLDQIYYSWE
        VFW + +LF+KCGWKNCIWIAKD GIYIR+FA  +DQ+ Y WE
Subjt:  VFWTNPQLFDKCGWKNCIWIAKDDGIYIRDFANRLDQIYYSWE

A0A5N5H3T8 S-protein homolog3.2e-4053.57Show/hide
Query:  IHLFVLLLSLTLTSSISFES-KGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFW
        IH+ VL  ++ ++ S+ F S KG +FP F +WHV+V+NG+   E L+VHC+S+D+DLG+ +L P  N TW F TN   STLFWC L+K +   +A KVFW
Subjt:  IHLFVLLLSLTLTSSISFES-KGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFW

Query:  TNPQLFDKCGWKNCIWIAKDDGIYIRDFANRLDQIYYSWE
         +  LF+KC WKNCIWIAKDDGIYI+DFAN  D+    WE
Subjt:  TNPQLFDKCGWKNCIWIAKDDGIYIRDFANRLDQIYYSWE

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 65.1e-1129.79Show/hide
Query:  IHLFVLLLSLTLTSSISFESKGSIFP---PFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKV
        I +F++L+SL    ++  +  G +FP   P  R  ++  N       L VHC+S+DDD G H L     + W F  N + STL++C   +       F +
Subjt:  IHLFVLLLSLTLTSSISFESKGSIFP---PFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKV

Query:  FWTNPQLFDKCGWKNCIWIAKDDGIYIRDFANRLDQIYYSW
        +     + D    +NC W AK+DGIY      + + ++Y W
Subjt:  FWTNPQLFDKCGWKNCIWIAKDDGIYIRDFANRLDQIYYSW

F4JLS0 S-protein homolog 11.7e-2746.55Show/hide
Query:  IFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFWTNPQLFDKCGWKNCIWIAKDDGIY
        I P    W V V+NGL   E L++HC+S++DDLG  +L  R  F+W+F  N+L ST FWC + K NG  +   VFW +  LF +CGWKNCIW AK DG+Y
Subjt:  IFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFWTNPQLFDKCGWKNCIWIAKDDGIY

Query:  IRDFANRLDQIYYSWE
        + + A+  D +   WE
Subjt:  IRDFANRLDQIYYSWE

O23020 S-protein homolog 53.6e-0936.46Show/hide
Query:  PPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFWTNPQLFDKCGWKNCIWIAKDDG
        PPF R  V  +  L    PL +HC+S+ DDLG+H +P +  + + F  NL +STLF+C  +      S FK F       D+    +C W  K DG
Subjt:  PPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFWTNPQLFDKCGWKNCIWIAKDDG

P0DN92 S-protein homolog 241.9e-1035.11Show/hide
Query:  LYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFWTNPQLFDKCGWKNCIWIAKDDGIYIRDFANRLDQIYYSW
        L +HC+S+DDDLG H L     F W F+ N   STL++C   +       F+++  N   F +C   NC W A+ DGIY          ++Y+W
Subjt:  LYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFWTNPQLFDKCGWKNCIWIAKDDGIYIRDFANRLDQIYYSW

Q2HQ46 S-protein homolog 743.1e-2442.24Show/hide
Query:  IFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFWTNPQLFDKCGWKNCIWIAKDDGIY
        + P    W V V NGL   E L++HC+S+++DLG  +L     F+W+F  N+L STLFWC + K +G  +  KVFW +  LF +C WKNC+W AK+DG+Y
Subjt:  IFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFWTNPQLFDKCGWKNCIWIAKDDGIY

Query:  IRDFANRLDQIYYSWE
        + + A   D +   W+
Subjt:  IRDFANRLDQIYYSWE

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family2.6e-1036.46Show/hide
Query:  PPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFWTNPQLFDKCGWKNCIWIAKDDG
        PPF R  V  +  L    PL +HC+S+ DDLG+H +P +  + + F  NL +STLF+C  +      S FK F       D+    +C W  K DG
Subjt:  PPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFWTNPQLFDKCGWKNCIWIAKDDG

AT1G26798.1 Plant self-incompatibility protein S1 family1.8e-1133.59Show/hide
Query:  HLFVLLLSLTLT---SSISFESKGSIFP--PFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFK
        H F+ +L  TL    +S++FE+  S+    PF   HV +IN LN  E L VHC+++  DLG+H+L P+    + F  NL ++T + C    + G +  F 
Subjt:  HLFVLLLSLTLT---SSISFESKGSIFP--PFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFK

Query:  VFWTNPQLFDK--CG-WKNCIWIAKDDG
        +F  +     K  CG  + CIW   + G
Subjt:  VFWTNPQLFDK--CG-WKNCIWIAKDDG

AT2G06090.1 Plant self-incompatibility protein S1 family3.7e-0931.88Show/hide
Query:  HLFVLLLSLTLTSSISFESKGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFWT-
        +LFVLL+ + L+      + GS   P  + H F  +     + L VHC+S+DDDLG+H++     + + F  ++   T F+C L   +G+ S + V +T 
Subjt:  HLFVLLLSLTLTSSISFESKGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFWT-

Query:  ---NPQLFDKCGWKNCIWIAKDDGIYIRDFANRLDQIY
            P      G    IW A DDGIY+ D  +   +IY
Subjt:  ---NPQLFDKCGWKNCIWIAKDDGIYIRDFANRLDQIY

AT4G16295.1 S-protein homologue 11.2e-2846.55Show/hide
Query:  IFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFWTNPQLFDKCGWKNCIWIAKDDGIY
        I P    W V V+NGL   E L++HC+S++DDLG  +L  R  F+W+F  N+L ST FWC + K NG  +   VFW +  LF +CGWKNCIW AK DG+Y
Subjt:  IFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFWTNPQLFDKCGWKNCIWIAKDDGIY

Query:  IRDFANRLDQIYYSWE
        + + A+  D +   WE
Subjt:  IRDFANRLDQIYYSWE

AT4G29035.1 Plant self-incompatibility protein S1 family2.2e-2542.24Show/hide
Query:  IFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFWTNPQLFDKCGWKNCIWIAKDDGIY
        + P    W V V NGL   E L++HC+S+++DLG  +L     F+W+F  N+L STLFWC + K +G  +  KVFW +  LF +C WKNC+W AK+DG+Y
Subjt:  IFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFWTNPQLFDKCGWKNCIWIAKDDGIY

Query:  IRDFANRLDQIYYSWE
        + + A   D +   W+
Subjt:  IRDFANRLDQIYYSWE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTCATCTATTTGTTCTTCTTCTATCGTTAACCTTAACCTCATCGATATCGTTCGAGAGCAAGGGAAGCATATTCCCTCCTTTCATTCGATGGCACGTGTTTGTCATCAA
TGGCTTAAACATCACCGAGCCATTGTACGTTCACTGCCAATCGCAGGACGACGATCTTGGCCTCCATAGCCTACCACCAAGGGCCAACTTCACCTGGAGTTTCAACACAA
ATTTGTTGCAGTCCACACTTTTTTGGTGTCGCCTTAAAAAATACAATGGTATTAGCTCCGCATTCAAGGTCTTTTGGACCAACCCGCAACTGTTTGACAAGTGCGGGTGG
AAGAATTGCATTTGGATTGCAAAAGATGATGGCATTTACATTAGGGACTTTGCTAATAGGCTCGACCAAATTTATTATTCATGGGAATTT
mRNA sequenceShow/hide mRNA sequence
ATTCATCTATTTGTTCTTCTTCTATCGTTAACCTTAACCTCATCGATATCGTTCGAGAGCAAGGGAAGCATATTCCCTCCTTTCATTCGATGGCACGTGTTTGTCATCAA
TGGCTTAAACATCACCGAGCCATTGTACGTTCACTGCCAATCGCAGGACGACGATCTTGGCCTCCATAGCCTACCACCAAGGGCCAACTTCACCTGGAGTTTCAACACAA
ATTTGTTGCAGTCCACACTTTTTTGGTGTCGCCTTAAAAAATACAATGGTATTAGCTCCGCATTCAAGGTCTTTTGGACCAACCCGCAACTGTTTGACAAGTGCGGGTGG
AAGAATTGCATTTGGATTGCAAAAGATGATGGCATTTACATTAGGGACTTTGCTAATAGGCTCGACCAAATTTATTATTCATGGGAATTT
Protein sequenceShow/hide protein sequence
IHLFVLLLSLTLTSSISFESKGSIFPPFIRWHVFVINGLNITEPLYVHCQSQDDDLGLHSLPPRANFTWSFNTNLLQSTLFWCRLKKYNGISSAFKVFWTNPQLFDKCGW
KNCIWIAKDDGIYIRDFANRLDQIYYSWEF