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MS002518 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002518
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionXyloglucan galactosyltransferase KATAMARI1-like protein
Genome locationscaffold318:768946..769290
RNA-Seq ExpressionMS002518
SyntenyMS002518
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039894.1 xyloglucan galactosyltransferase KATAMARI1-like protein [Cucumis melo var. makuwa]2.8e-1270.67Show/hide
Query:  MEAGG--GAFERARSGGINDRGASMSVRHGCAEGKLHNCCCINIYVNSNIQGVSNSILKNGSEVKMGSPGVWFFF
        MEA G   A ER R  G N  GASMSV HG  E KL NCCCINIYVNSNIQGV+NS L NG EVKMGSPGV+F F
Subjt:  MEAGG--GAFERARSGGINDRGASMSVRHGCAEGKLHNCCCINIYVNSNIQGVSNSILKNGSEVKMGSPGVWFFF

KAG5072492.1 hypothetical protein JHK86_007703 [Glycine max]1.3e-0942.42Show/hide
Query:  GASMSVRHGCAEGKLHNCCCINIYVNSNIQGVSNSILKNGSEVKMGSPGVWFFFDQ------NPHQNPNQWQW-----LWLLVGAVLLLILIVVVLLAT
        GA+M VRH   +G+  +CCCINIYVN+N+QGVSNS+L +GSEV+M  PGV  +F+           N   + W      WL +  +L L+ ++V+L +T
Subjt:  GASMSVRHGCAEGKLHNCCCINIYVNSNIQGVSNSILKNGSEVKMGSPGVWFFFDQ------NPHQNPNQWQW-----LWLLVGAVLLLILIVVVLLAT

KAG6592845.1 hypothetical protein SDJN03_12321, partial [Cucurbita argyrosperma subsp. sororia]5.2e-1175.41Show/hide
Query:  EAGGGAFERARSGGINDRGASMSVRHGCAEGKLHNCCCINIYVNSNIQGVSNSILKNGSEV
        E G GAFER R GG N  GASMSV HG +EGKL NCCCINIYVNSNIQGV+NS L NGSE+
Subjt:  EAGGGAFERARSGGINDRGASMSVRHGCAEGKLHNCCCINIYVNSNIQGVSNSILKNGSEV

KGN46369.1 hypothetical protein Csa_004893 [Cucumis sativus]8.3e-1756.2Show/hide
Query:  AFERARSGGINDRGASMSVRHGCAEGKLHNCCCINIYVNSNIQGVSNSILKNGSEVKMGSPGVWFFF-DQNP----------HQNPNQWQW-LWLLVGAV
        A E  R  G N  GASMSV HG  E KL NCCCINIYVNSNIQGV+NS L NG EVKMGSPGV+F F D  P          HQNP  WQW L +L+   
Subjt:  AFERARSGGINDRGASMSVRHGCAEGKLHNCCCINIYVNSNIQGVSNSILKNGSEVKMGSPGVWFFF-DQNP----------HQNPNQWQW-LWLLVGAV

Query:  LLLILIVVVLLATPKLGMFHS
        LLL L+ ++LL   ++ M HS
Subjt:  LLLILIVVVLLATPKLGMFHS

XP_030470661.1 uncharacterized protein LOC115688861 [Syzygium oleosum]7.5e-1048.48Show/hide
Query:  GASMSVRHGCAEGKLHNCCCINIYVNSNIQGVSNSILKNGSEVKMGSPGVWFFFDQ----NPHQNPNQWQ---WLW--------LLVGAVLLLILIVVV
        GA+M VR GCA G+  + CCINIY+NSN+QGVSNSIL  GSEV+MG PGV  +F      N H+   ++Q   W +        LLV A+LLL+L++++
Subjt:  GASMSVRHGCAEGKLHNCCCINIYVNSNIQGVSNSILKNGSEVKMGSPGVWFFFDQ----NPHQNPNQWQ---WLW--------LLVGAVLLLILIVVV

TrEMBL top hitse value%identityAlignment
A0A0A0KBZ5 Uncharacterized protein4.0e-1756.2Show/hide
Query:  AFERARSGGINDRGASMSVRHGCAEGKLHNCCCINIYVNSNIQGVSNSILKNGSEVKMGSPGVWFFF-DQNP----------HQNPNQWQW-LWLLVGAV
        A E  R  G N  GASMSV HG  E KL NCCCINIYVNSNIQGV+NS L NG EVKMGSPGV+F F D  P          HQNP  WQW L +L+   
Subjt:  AFERARSGGINDRGASMSVRHGCAEGKLHNCCCINIYVNSNIQGVSNSILKNGSEVKMGSPGVWFFF-DQNP----------HQNPNQWQW-LWLLVGAV

Query:  LLLILIVVVLLATPKLGMFHS
        LLL L+ ++LL   ++ M HS
Subjt:  LLLILIVVVLLATPKLGMFHS

A0A445LCK5 Uncharacterized protein6.2e-1042.42Show/hide
Query:  GASMSVRHGCAEGKLHNCCCINIYVNSNIQGVSNSILKNGSEVKMGSPGVWFFFDQ------NPHQNPNQWQW-----LWLLVGAVLLLILIVVVLLAT
        GA+M VRH   +G+  +CCCINIYVN+N+QGVSNS+L +GSEV+M  PGV  +F+           N   + W      WL +  +L L+ ++V+L +T
Subjt:  GASMSVRHGCAEGKLHNCCCINIYVNSNIQGVSNSILKNGSEVKMGSPGVWFFFDQ------NPHQNPNQWQW-----LWLLVGAVLLLILIVVVLLAT

A0A5A7T8V9 Xyloglucan galactosyltransferase KATAMARI1-like protein1.3e-1270.67Show/hide
Query:  MEAGG--GAFERARSGGINDRGASMSVRHGCAEGKLHNCCCINIYVNSNIQGVSNSILKNGSEVKMGSPGVWFFF
        MEA G   A ER R  G N  GASMSV HG  E KL NCCCINIYVNSNIQGV+NS L NG EVKMGSPGV+F F
Subjt:  MEAGG--GAFERARSGGINDRGASMSVRHGCAEGKLHNCCCINIYVNSNIQGVSNSILKNGSEVKMGSPGVWFFF

K7KFJ6 Uncharacterized protein6.2e-1042.42Show/hide
Query:  GASMSVRHGCAEGKLHNCCCINIYVNSNIQGVSNSILKNGSEVKMGSPGVWFFFDQ------NPHQNPNQWQW-----LWLLVGAVLLLILIVVVLLAT
        GA+M VRH   +G+  +CCCINIYVN+N+QGVSNS+L +GSEV+M  PGV  +F+           N   + W      WL +  +L L+ ++V+L +T
Subjt:  GASMSVRHGCAEGKLHNCCCINIYVNSNIQGVSNSILKNGSEVKMGSPGVWFFFDQ------NPHQNPNQWQW-----LWLLVGAVLLLILIVVVLLAT

V7CWU8 Uncharacterized protein2.4e-0941.84Show/hide
Query:  GASMSVRHGCAEGKLHNCCCINIYVNSNIQGVSNSILKNGSEVKMGSPGVWFF-----FDQNPHQNPNQWQW-----LWLLVGAVLLLILIVVVLLAT
        GA+M + H   +G   +CCCINIYVN+N+QGVSNS+L +GSEV+M  PGV  +     FD+    + N + W      WL +  +L L+ ++V+L +T
Subjt:  GASMSVRHGCAEGKLHNCCCINIYVNSNIQGVSNSILKNGSEVKMGSPGVWFF-----FDQNPHQNPNQWQW-----LWLLVGAVLLLILIVVVLLAT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCAGGCGGTGGGGCGTTCGAGCGGGCAAGGTCGGGAGGTATAAACGACAGAGGAGCTTCAATGTCAGTGAGGCATGGATGTGCAGAAGGCAAATTGCACAACTG
TTGCTGCATAAACATTTATGTAAACAGCAACATTCAGGGAGTGAGCAACTCAATATTGAAGAATGGGAGTGAGGTCAAAATGGGAAGCCCAGGAGTTTGGTTCTTCTTTG
ATCAAAATCCACATCAAAATCCCAACCAATGGCAATGGTTATGGCTGTTGGTTGGTGCTGTGTTGCTGCTCATACTCATTGTTGTTGTGCTGTTGGCGACACCTAAGTTG
GGAATGTTTCATTCT
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCAGGCGGTGGGGCGTTCGAGCGGGCAAGGTCGGGAGGTATAAACGACAGAGGAGCTTCAATGTCAGTGAGGCATGGATGTGCAGAAGGCAAATTGCACAACTG
TTGCTGCATAAACATTTATGTAAACAGCAACATTCAGGGAGTGAGCAACTCAATATTGAAGAATGGGAGTGAGGTCAAAATGGGAAGCCCAGGAGTTTGGTTCTTCTTTG
ATCAAAATCCACATCAAAATCCCAACCAATGGCAATGGTTATGGCTGTTGGTTGGTGCTGTGTTGCTGCTCATACTCATTGTTGTTGTGCTGTTGGCGACACCTAAGTTG
GGAATGTTTCATTCT
Protein sequenceShow/hide protein sequence
MEAGGGAFERARSGGINDRGASMSVRHGCAEGKLHNCCCINIYVNSNIQGVSNSILKNGSEVKMGSPGVWFFFDQNPHQNPNQWQWLWLLVGAVLLLILIVVVLLATPKL
GMFHS