CuGenDBv2

Gene ID	MS002520
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Cytochrome oxidase assembly protein
Genome location	scaffold318:772690..776409
RNA-Seq Expression	MS002520
Synteny	MS002520
Gene Ontology terms	NA
InterPro domains	IPR014807 - Cytochrome c oxidase assembly factor 1

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0039892.1 Vacuolar sorting-associated protein 62 [Cucumis melo var. makuwa]

4.7e-77

84.52

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Query:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
        S+SIKP+E  VNK WGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQA++DAIGEPI KGPWYNASLAVAHKRHSLSCTFPVSGPQG GI
Subjt:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI

Query:  LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVA---CQPPDTD
        LQLKAVR+GE+SWISF+RPR+WDIL+MDALL+VP N+GK++TLRINLTEKF PAACV+   CQPP+T+
Subjt:  LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVA---CQPPDTD

XP_022157492.1 uncharacterized protein LOC111024183 isoform X1 [Momordica charantia]

1.9e-91

100

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Query:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
        SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
Subjt:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI

Query:  LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVACQPPDTDTH
        LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVACQPPDTDTH
Subjt:  LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVACQPPDTDTH

XP_022157493.1 uncharacterized protein LOC111024183 isoform X2 [Momordica charantia]

1.9e-91

100

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Query:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
        SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
Subjt:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI

Query:  LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVACQPPDTDTH
        LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVACQPPDTDTH
Subjt:  LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVACQPPDTDTH

XP_038876218.1 uncharacterized protein LOC120068500 isoform X1 [Benincasa hispida]

2.0e-80

87.57

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Query:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
        SSSIKP+E+GVNK WGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQA+ DAIGEPI KGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
Subjt:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI

Query:  LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVA---CQPPDTDT
        LQLKAVR+GE+SWISF+RPR+WDILIMDALLHVPAN+GK++T+RINLTEKF PAACV+   CQPP+T+T
Subjt:  LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVA---CQPPDTDT

XP_038876219.1 uncharacterized protein LOC120068500 isoform X2 [Benincasa hispida]

2.0e-80

87.57

Show/hide

Query:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
        SSSIKP+E+GVNK WGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQA+ DAIGEPI KGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
Subjt:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI

Query:  LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVA---CQPPDTDT
        LQLKAVR+GE+SWISF+RPR+WDILIMDALLHVPAN+GK++T+RINLTEKF PAACV+   CQPP+T+T
Subjt:  LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVA---CQPPDTDT

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CBF0 uncharacterized protein LOC103498925 isoform X1

2.3e-77

84.52

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Query:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
        S+SIKP+E  VNK WGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQA++DAIGEPI KGPWYNASLAVAHKRHSLSCTFPVSGPQG GI
Subjt:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI

Query:  LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVA---CQPPDTD
        LQLKAVR+GE+SWISF+RPR+WDIL+MDALL+VP N+GK++TLRINLTEKF PAACV+   CQPP+T+
Subjt:  LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVA---CQPPDTD

A0A5D3DMW4 Vacuolar sorting-associated protein 62

2.3e-77

84.52

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Query:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
        S+SIKP+E  VNK WGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQA++DAIGEPI KGPWYNASLAVAHKRHSLSCTFPVSGPQG GI
Subjt:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI

Query:  LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVA---CQPPDTD
        LQLKAVR+GE+SWISF+RPR+WDIL+MDALL+VP N+GK++TLRINLTEKF PAACV+   CQPP+T+
Subjt:  LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVA---CQPPDTD

A0A6J1DTH6 uncharacterized protein LOC111024183 isoform X2

9.4e-92

100

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Query:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
        SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
Subjt:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI

Query:  LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVACQPPDTDTH
        LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVACQPPDTDTH
Subjt:  LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVACQPPDTDTH

A0A6J1DUL5 uncharacterized protein LOC111024183 isoform X1

9.4e-92

100

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Query:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
        SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
Subjt:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI

Query:  LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVACQPPDTDTH
        LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVACQPPDTDTH
Subjt:  LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVACQPPDTDTH

A0A6J1JLR1 uncharacterized protein LOC111488050 isoform X2

6.6e-77

87.58

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Query:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
        SSS++P+EEGVNK WGRKAVSFVL+TVTGGVALSALDDLAIYHSCSSKAIEKA+NN+A+ DAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
Subjt:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI

Query:  LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAA--CVAC
        +QLKAVR+GE+SWISF+RPR+WDILIMDALLHVP N+GK+QTLRINLTEKF PAA  CVAC
Subjt:  LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAA--CVAC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G20390.1 unknown protein

1.7e-56

66.88

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Query:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
        S+S      G    +GRKAVSFVLITVTGGVALSALDDL+IY  CSSKA+EK  N++ + +AIGEPI KGPWYNASLAV+H+RHS+SC+FPV GPQGTGI
Subjt:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI

Query:  LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPA
        L LKAVR+GE+S   F++ R+WDILIMDAL+HVP+N+G +QTLRIN+T+   P+
Subjt:  LQLKAVRSGEESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPA

AT2G20390.2 unknown protein

4.7e-51

54.21

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Query:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
        S+S      G    +GRKAVSFVLITVTGGVALSALDDL+IY  CSSKA+EK  N++ + +AIGEPI KGPWYNASLAV+H+RHS+SC+FPV GPQGTGI
Subjt:  SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI

Query:  LQLKAVRSG------------------------------------EESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPA
        L LKAVR+G                                    E+S   F++ R+WDILIMDAL+HVP+N+G +QTLRIN+T+   P+
Subjt:  LQLKAVRSG------------------------------------EESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPA

Sequences

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CDS sequence

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AGCAGTTCCATAAAGCCAGCGGAAGAAGGGGTGAATAAATTCTGGGGTCGTAAGGCAGTTTCGTTTGTACTTATTACTGTTACTGGTGGTGTTGCTTTGAGTGCTTTAGA
TGATCTTGCCATTTATCATAGCTGTAGCAGCAAAGCCATAGAGAAAGCCAGAAACAACCAAGCACTTAGAGATGCTATTGGGGAACCCATTGTTAAAGGTCCATGGTACA
ATGCATCACTTGCAGTAGCTCATAAGAGACATTCTCTATCCTGCACGTTTCCTGTGTCAGGACCACAGGGCACTGGGATCCTCCAATTGAAGGCAGTTCGTAGTGGAGAG
GAGTCCTGGATCTCTTTTGTCCGGCCACGTGAGTGGGACATTCTAATCATGGATGCACTTCTACATGTTCCTGCAAACCAAGGGAAGGAGCAGACATTGCGCATCAATCT
CACTGAGAAATTTCCTCCCGCTGCCTGCGTCGCTTGTCAGCCTCCAGACACAGACACACAC

mRNA sequence

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Protein sequence

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SSSIKPAEEGVNKFWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQALRDAIGEPIVKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGILQLKAVRSGE
ESWISFVRPREWDILIMDALLHVPANQGKEQTLRINLTEKFPPAACVACQPPDTDTH

MS002520 (gene) of Bitter gourd (TR) v1 genome