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MS002522 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002522
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionVacuolar sorting-associated protein 62
Genome locationscaffold318:781740..781877
RNA-Seq ExpressionMS002522
SyntenyMS002522
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014597.1 hypothetical protein SDJN02_24776 [Cucurbita argyrosperma subsp. argyrosperma]2.1e-1184.78Show/hide
Query:  SSSVKLSEEGVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
        SSSV+ SEEGVNKSWG K VSFVL   TGGVALSALDDLAIYHSCS
Subjt:  SSSVKLSEEGVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
XP_022991411.1 uncharacterized protein LOC111488050 isoform X1 [Cucurbita maxima]2.1e-1184.78Show/hide
Query:  SSSVKLSEEGVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
        SSSV+ SEEGVNKSWG K VSFVL   TGGVALSALDDLAIYHSCS
Subjt:  SSSVKLSEEGVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
XP_022991412.1 uncharacterized protein LOC111488050 isoform X2 [Cucurbita maxima]2.1e-1184.78Show/hide
Query:  SSSVKLSEEGVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
        SSSV+ SEEGVNKSWG K VSFVL   TGGVALSALDDLAIYHSCS
Subjt:  SSSVKLSEEGVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
XP_023547892.1 uncharacterized protein LOC111806704 isoform X1 [Cucurbita pepo subsp. pepo]2.1e-1184.78Show/hide
Query:  SSSVKLSEEGVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
        SSSV+ SEEGVNKSWG K VSFVL   TGGVALSALDDLAIYHSCS
Subjt:  SSSVKLSEEGVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
XP_023547893.1 uncharacterized protein LOC111806704 isoform X2 [Cucurbita pepo subsp. pepo]2.1e-1184.78Show/hide
Query:  SSSVKLSEEGVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
        SSSV+ SEEGVNKSWG K VSFVL   TGGVALSALDDLAIYHSCS
Subjt:  SSSVKLSEEGVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
TrEMBL top hitse value%identityAlignment
A0A6J1DUL5 uncharacterized protein LOC111024183 isoform X18.6e-1180.43Show/hide
Query:  SSSVKLSEEGVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
        SSS+K +EEGVNK WG K VSFVL   TGGVALSALDDLAIYHSCS
Subjt:  SSSVKLSEEGVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
A0A6J1GQN1 uncharacterized protein LOC111456591 isoform X13.8e-1182.61Show/hide
Query:  SSSVKLSEEGVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
        SSSV+ SEEGVNKSWG   VSFVL   TGGVALSALDDLAIYHSCS
Subjt:  SSSVKLSEEGVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
A0A6J1GQQ6 uncharacterized protein LOC111456591 isoform X23.8e-1182.61Show/hide
Query:  SSSVKLSEEGVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
        SSSV+ SEEGVNKSWG   VSFVL   TGGVALSALDDLAIYHSCS
Subjt:  SSSVKLSEEGVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
A0A6J1JLR1 uncharacterized protein LOC111488050 isoform X21.0e-1184.78Show/hide
Query:  SSSVKLSEEGVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
        SSSV+ SEEGVNKSWG K VSFVL   TGGVALSALDDLAIYHSCS
Subjt:  SSSVKLSEEGVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
A0A6J1JQM9 uncharacterized protein LOC111488050 isoform X11.0e-1184.78Show/hide
Query:  SSSVKLSEEGVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
        SSSV+ SEEGVNKSWG K VSFVL   TGGVALSALDDLAIYHSCS
Subjt:  SSSVKLSEEGVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G20390.1 unknown protein7.4e-0767.57Show/hide
Query:  GVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
        G   S+G K VSFVL   TGGVALSALDDL+IY  CS
Subjt:  GVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
AT2G20390.2 unknown protein7.4e-0767.57Show/hide
Query:  GVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS
        G   S+G K VSFVL   TGGVALSALDDL+IY  CS
Subjt:  GVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCAGTTCCGTTAAGCTATCTGAGGAAGGGGTGAATAAATCCTGGGGCCATAAACCAGTCTCGTTTGTGCTTACTATTGCTACTGGTGGTGTAGCTTTGAGTGCTTTAGA
CGACCTCGCCATTTATCATAGCTGTAGC
mRNA sequenceShow/hide mRNA sequence
AGCAGTTCCGTTAAGCTATCTGAGGAAGGGGTGAATAAATCCTGGGGCCATAAACCAGTCTCGTTTGTGCTTACTATTGCTACTGGTGGTGTAGCTTTGAGTGCTTTAGA
CGACCTCGCCATTTATCATAGCTGTAGC
Protein sequenceShow/hide protein sequence
SSSVKLSEEGVNKSWGHKPVSFVLTIATGGVALSALDDLAIYHSCS