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MS002572 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002572
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF4218 domain-containing protein
Genome locationscaffold249:416588..416776
RNA-Seq ExpressionMS002572
SyntenyMS002572
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651942.1 hypothetical protein Csa_006405 [Cucumis sativus]4.4e-0452.46Show/hide
Query:  NLDIIDHIVMRYLDHEMSTRNKDFRYRLHKWYKEFD-PTKARNNRHEDVLLYEDWNRLCDR
        NLD  D +V  YLDHEMS   +DF   LHK YK+ D PT+AR +  + V    DW RLCDR
Subjt:  NLDIIDHIVMRYLDHEMSTRNKDFRYRLHKWYKEFD-PTKARNNRHEDVLLYEDWNRLCDR
XP_022156286.1 uncharacterized protein LOC111023212 [Momordica charantia]7.5e-0441.27Show/hide
Query:  HFNLDIIDHIVMRYLDHEMSTRNKDFRYRLHKWYKEF-DPTKARNNRHEDVLLYEDWNRLCDR
        HF +D+   +V ++++ +M    K +R  LH++Y EF DP +AR N  E +   EDWN LCDR
Subjt:  HFNLDIIDHIVMRYLDHEMSTRNKDFRYRLHKWYKEF-DPTKARNNRHEDVLLYEDWNRLCDR
XP_022156301.1 uncharacterized protein LOC111023227 [Momordica charantia]1.5e-0755.36Show/hide
Query:  NHFNLDIIDHIVMRYLDHEMSTRNKDFRYRLHKWYKEFDPTKARNNRHEDVLLYED
        N F L++ D IV RYL+HEMS+R+ DFRYRLHK Y ++ P +AR+++H+DV   ED
Subjt:  NHFNLDIIDHIVMRYLDHEMSTRNKDFRYRLHKWYKEFDPTKARNNRHEDVLLYED
TrEMBL top hitse value%identityAlignment
A0A0A0LM17 Uncharacterized protein3.0e-0651.56Show/hide
Query:  NHFNLDIIDHIVMRYLDHEMSTRNKDFRYRLHKWYKEFD-PTKARNNRHEDVLLYEDWNRLCDR
        N+F LD+ D +V  YLDHEMS   +DF   LHK YK+ D PT+AR +  + V    DW RLCDR
Subjt:  NHFNLDIIDHIVMRYLDHEMSTRNKDFRYRLHKWYKEFD-PTKARNNRHEDVLLYEDWNRLCDR
A0A5A7SQC8 DUF4218 domain-containing protein6.2e-0451.92Show/hide
Query:  NHFNLDIIDHIVMRYLDHEMSTRNKDFRYRLHKWYKEFD-PTKARNNRHEDV
        N+F LD+ + +V  YL+HEMS   +DFR  LHK YK++D P KAR +RH+ V
Subjt:  NHFNLDIIDHIVMRYLDHEMSTRNKDFRYRLHKWYKEFD-PTKARNNRHEDV
A0A5D3BIG6 DUF4218 domain-containing protein6.2e-0451.92Show/hide
Query:  NHFNLDIIDHIVMRYLDHEMSTRNKDFRYRLHKWYKEFD-PTKARNNRHEDV
        N+F LD+ + +V  YL+HEMS   +DFR  LHK YK++D P KAR +RH+ V
Subjt:  NHFNLDIIDHIVMRYLDHEMSTRNKDFRYRLHKWYKEFD-PTKARNNRHEDV
A0A6J1DUH3 uncharacterized protein LOC1110232123.6e-0441.27Show/hide
Query:  HFNLDIIDHIVMRYLDHEMSTRNKDFRYRLHKWYKEF-DPTKARNNRHEDVLLYEDWNRLCDR
        HF +D+   +V ++++ +M    K +R  LH++Y EF DP +AR N  E +   EDWN LCDR
Subjt:  HFNLDIIDHIVMRYLDHEMSTRNKDFRYRLHKWYKEF-DPTKARNNRHEDVLLYEDWNRLCDR
A0A6J1DUJ0 uncharacterized protein LOC1110232277.1e-0855.36Show/hide
Query:  NHFNLDIIDHIVMRYLDHEMSTRNKDFRYRLHKWYKEFDPTKARNNRHEDVLLYED
        N F L++ D IV RYL+HEMS+R+ DFRYRLHK Y ++ P +AR+++H+DV   ED
Subjt:  NHFNLDIIDHIVMRYLDHEMSTRNKDFRYRLHKWYKEFDPTKARNNRHEDVLLYED
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATCACTTCAATCTCGATATAATTGACCATATTGTCATGCGATACTTGGACCACGAGATGAGTACCAGGAACAAGGATTTTCGCTACCGATTGCACAAATGGTAC
AAGGAATTTGATCCCACCAAGGCACGAAATAACCGACATGAAGATGTATTGCTATATGAAGATTGGAATCGCTTGTGCGATCGA
mRNA sequenceShow/hide mRNA sequence
AATCACTTCAATCTCGATATAATTGACCATATTGTCATGCGATACTTGGACCACGAGATGAGTACCAGGAACAAGGATTTTCGCTACCGATTGCACAAATGGTAC
AAGGAATTTGATCCCACCAAGGCACGAAATAACCGACATGAAGATGTATTGCTATATGAAGATTGGAATCGCTTGTGCGATCGA
Protein sequenceShow/hide protein sequence
NHFNLDIIDHIVMRYLDHEMSTRNKDFRYRLHKWYKEFDPTKARNNRHEDVLLYEDWNRLCDR