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MS002578 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002578
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 2, chloroplastic
Genome locationscaffold475:31874..31972
RNA-Seq ExpressionMS002578
SyntenyMS002578
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0042773 - ATP synthesis coupled electron transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ARC97702.1 NADH-plastoquinone oxidoreductase subunit 2 [Agrimonia pilosa]4.5e-0894.29Show/hide
Query:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
        GGMFLCGANDLITIFVALECFS  SYLLSGYTKKD
Subjt:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
QBE87026.1 NADH dehydrogenase subunit 2 [Antigonon leptopus]4.5e-0894.29Show/hide
Query:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
        GGMFLCGANDLITIFVALECFS  SYLLSGYTKKD
Subjt:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
YP_003434384.1 NADH-plastoquinone oxidoreductase subunit 2 [Vigna radiata]4.5e-0894.29Show/hide
Query:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
        GGMFLCGANDLITIFVALECFS  SYLLSGYTKKD
Subjt:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
YP_009456509.1 NADH-plastoquinone oxidoreductase subunit 2 [Gymnocarpos przewalskii]4.5e-0894.29Show/hide
Query:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
        GGMFLCGANDLITIFVALECFS  SYLLSGYTKKD
Subjt:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
YP_009770795.1 NADH dehydrogenase subunit 2 [Butea monosperma]4.5e-0894.29Show/hide
Query:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
        GGMFLCGANDLITIFVALECFS  SYLLSGYTKKD
Subjt:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
TrEMBL top hitse value%identityAlignment
A0A0F7RPH5 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic2.2e-0894.29Show/hide
Query:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
        GGMFLCGANDLITIFVALECFS  SYLLSGYTKKD
Subjt:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
A0A173CT74 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic2.2e-0894.29Show/hide
Query:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
        GGMFLCGANDLITIFVALECFS  SYLLSGYTKKD
Subjt:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
A0A7G9IST9 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic2.2e-0894.29Show/hide
Query:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
        GGMFLCGANDLITIFVALECFS  SYLLSGYTKKD
Subjt:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
A0A7G9M1S0 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic2.2e-0894.29Show/hide
Query:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
        GGMFLCGANDLITIFVALECFS  SYLLSGYTKKD
Subjt:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
A0A7G9XGC2 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic2.2e-0894.29Show/hide
Query:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
        GGMFLCGANDLITIFVALECFS  SYLLSGYTKKD
Subjt:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
SwissProt top hitse value%identityAlignment
P0CC32 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic5.9e-1194.29Show/hide
Query:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
        GGMFLCGANDLITIFVALECFS  SYLLSGYTKKD
Subjt:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
P0CC33 NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic5.9e-1194.29Show/hide
Query:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
        GGMFLCGANDLITIFVALECFS  SYLLSGYTKKD
Subjt:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
P0CC62 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic5.9e-1194.29Show/hide
Query:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
        GGMFLCGANDLITIFVALECFS  SYLLSGYTKKD
Subjt:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
P0CC98 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic5.9e-1194.29Show/hide
Query:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
        GGMFLCGANDLITIFVALECFS  SYLLSGYTKKD
Subjt:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
P0CD28 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic5.9e-1194.29Show/hide
Query:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
        GGMFLCGANDLITIFVALECFS  SYLLSGYTKKD
Subjt:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
Arabidopsis top hitse value%identityAlignment
ATCG00890.1 NADH-Ubiquinone/plastoquinone (complex I) protein2.7e-1191.43Show/hide
Query:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
        GGMFLCGANDLITIFVA ECFS  SYLLSGYTKKD
Subjt:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
ATCG01250.1 NADH-Ubiquinone/plastoquinone (complex I) protein2.7e-1191.43Show/hide
Query:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD
        GGMFLCGANDLITIFVA ECFS  SYLLSGYTKKD
Subjt:  GGMFLCGANDLITIFVALECFS--SYLLSGYTKKD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAGGAATGTTTTTATGCGGTGCTAATGATTTAATAACTATCTTTGTAGCTCTAGAATGTTTCAGCTCCTACCTATTATCTGGATATACCAAGAAAGAT
mRNA sequenceShow/hide mRNA sequence
GGAGGAATGTTTTTATGCGGTGCTAATGATTTAATAACTATCTTTGTAGCTCTAGAATGTTTCAGCTCCTACCTATTATCTGGATATACCAAGAAAGAT
Protein sequenceShow/hide protein sequence
GGMFLCGANDLITIFVALECFSSYLLSGYTKKD