; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002604 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002604
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPolyamine-modulated factor 1/Kinetochore protein NNF
Genome locationscaffold111:22637..26424
RNA-Seq ExpressionMS002604
SyntenyMS002604
Gene Ontology termsGO:0007049 - cell cycle (biological process)
GO:0007059 - chromosome segregation (biological process)
GO:0051301 - cell division (biological process)
GO:0000818 - nuclear MIS12/MIND complex (cellular component)
InterPro domainsIPR007128 - Nuclear MIS12/MIND complex subunit PMF1/Nnf1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600431.1 hypothetical protein SDJN03_05664, partial [Cucurbita argyrosperma subsp. sororia]3.5e-6984.76Show/hide
Query:  MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPL
        MEKKHE+STP +SS +DLKKSFKLAVRSLLTSCSREEFRECF  FT  EQE LHRLF+QVITSLHGNIEDEFESLCIETQVG ILDNV+QLLEEQ LDPL
Subjt:  MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPL

Query:  YSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKVQ
        YSKKTNIMDIANYLSMTKKNEIQ LKDMLKT+EEQN+H+QARID+L+KGV+D SG ADAVEK++
Subjt:  YSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKVQ

KAG7015109.1 hypothetical protein SDJN02_22742 [Cucurbita argyrosperma subsp. argyrosperma]7.8e-6983.43Show/hide
Query:  MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIET-----QVGPILDNVEQLLEEQ
        M+KKHE+ TP SSS +DLKKSFKLAVRSLLTSCSREEFRECF RFT AEQEYLHRLFIQVITSLHGNIEDEFESLC+ET     QVG +LDNVEQLLEEQ
Subjt:  MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIET-----QVGPILDNVEQLLEEQ

Query:  GLDPLYSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKVQ
         LDPLYSKKTNIM+IANYLSMTKKNEIQ LKDMLKTAEEQN+HVQ RID+LRKGVQD S   DAVEK++
Subjt:  GLDPLYSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKVQ

XP_022136388.1 uncharacterized protein LOC111008110 [Momordica charantia]2.3e-8199.39Show/hide
Query:  MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPL
        MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPL
Subjt:  MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPL

Query:  YSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKV
        YSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEK+
Subjt:  YSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKV

XP_022931290.1 uncharacterized protein LOC111437518 isoform X1 [Cucurbita moschata]1.1e-7085.98Show/hide
Query:  MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPL
        M+KKHE+ TP SSS +DLKKSFKLAVRSLLTSCSREEFRECF RFT AEQEYLHRLFIQVITSLHGNIEDEFESLC+ETQVG +LDNVEQLLEEQ LDPL
Subjt:  MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPL

Query:  YSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKVQ
        YSKKTNIM+IANYLSMTKKNEIQ LKDMLKTAEEQN+HVQ RID+LRKGVQD S   DAVEK++
Subjt:  YSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKVQ

XP_022985332.1 uncharacterized protein LOC111483373 isoform X1 [Cucurbita maxima]2.1e-6984.76Show/hide
Query:  MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPL
        M+KKHE+ TP SSS +DLKKSFKLAVRSLLTSCSR EFRECF RFT AEQEYLHRLFIQVITSLHGNIEDEFESLC+ET+VG +LDNVEQLLEEQ LDPL
Subjt:  MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPL

Query:  YSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKVQ
        YSKKTNIM+IANYLSMTKKNEIQ LKDMLKTAEEQN+HVQ RID+LRKGVQD S   DAVEK++
Subjt:  YSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKVQ

TrEMBL top hitse value%identityAlignment
A0A6J1C7G2 uncharacterized protein LOC1110081101.1e-8199.39Show/hide
Query:  MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPL
        MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPL
Subjt:  MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPL

Query:  YSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKV
        YSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEK+
Subjt:  YSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKV

A0A6J1EZ15 uncharacterized protein LOC111437518 isoform X15.3e-7185.98Show/hide
Query:  MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPL
        M+KKHE+ TP SSS +DLKKSFKLAVRSLLTSCSREEFRECF RFT AEQEYLHRLFIQVITSLHGNIEDEFESLC+ETQVG +LDNVEQLLEEQ LDPL
Subjt:  MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPL

Query:  YSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKVQ
        YSKKTNIM+IANYLSMTKKNEIQ LKDMLKTAEEQN+HVQ RID+LRKGVQD S   DAVEK++
Subjt:  YSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKVQ

A0A6J1FPA4 uncharacterized protein LOC1114470075.5e-6883.54Show/hide
Query:  MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPL
        MEKKHE+STP +SS +DLK SFKLAVRSLLTSCSREEFREC   FT  EQE LHRLF+QVITSLHGNIEDEFESLCIETQVG ILDNVEQLLEEQ LDPL
Subjt:  MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPL

Query:  YSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKVQ
        YSKKTNIMDI NYLSMTKKNEIQ LKDMLKT+EEQN+H+QARID+L+KGV+D SG ADAVEK++
Subjt:  YSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKVQ

A0A6J1IY03 uncharacterized protein LOC1114816543.5e-6781.71Show/hide
Query:  MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPL
        MEKKH++ +P +SS +DLKKSFKLAVRSLLTSCSREEFRECF  FT AEQE LH LF+QVITSLHGNIEDEFESLCIETQVG +LDNVEQLLEEQ LDPL
Subjt:  MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPL

Query:  YSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKVQ
        YSKKTNIMDIA+YLS+TKKNEIQ LKDMLKT+EEQN+H+QARID+L+KGV+D SG ADAVEK++
Subjt:  YSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKVQ

A0A6J1J4K9 uncharacterized protein LOC111483373 isoform X11.0e-6984.76Show/hide
Query:  MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPL
        M+KKHE+ TP SSS +DLKKSFKLAVRSLLTSCSR EFRECF RFT AEQEYLHRLFIQVITSLHGNIEDEFESLC+ET+VG +LDNVEQLLEEQ LDPL
Subjt:  MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPL

Query:  YSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKVQ
        YSKKTNIM+IANYLSMTKKNEIQ LKDMLKTAEEQN+HVQ RID+LRKGVQD S   DAVEK++
Subjt:  YSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G19350.1 embryo defective 30064.3e-4153.37Show/hide
Query:  MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPL
        MEK    +  A S    LKKSFK  +R LLT+CS+++F + F +F+ AEQE L +L+ +V+ +LH  IE+EF+  C ETQVGPILD VE+L+EEQ LDPL
Subjt:  MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPL

Query:  YSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKV
        +S KT++M IA  L+ +KKNEIQ+L  +L+ AEEQN+  +ARI +L+K  QD+SGTAD +EK+
Subjt:  YSKKTNIMDIANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAAGCACGAGGTTAGTACTCCAGCGAGCTCTAGCCATCTCGATCTGAAAAAGTCGTTCAAGCTCGCCGTTCGTTCCCTCCTCACTTCCTGTTCCAGGGAGGA
GTTTCGGGAATGCTTTTTGAGATTTACAAATGCGGAGCAAGAATATCTTCATCGTCTTTTCATTCAGGTTATAACTTCTTTGCATGGAAACATAGAGGACGAGTTTGAGT
CATTGTGCATTGAAACACAGGTGGGACCTATACTTGATAATGTTGAACAACTTTTGGAAGAACAAGGTCTAGATCCTTTATATTCCAAGAAGACTAATATAATGGATATT
GCTAATTATCTGTCCATGACAAAGAAGAATGAGATCCAGCGCTTGAAGGATATGCTGAAAACGGCTGAGGAACAGAACCAGCATGTTCAAGCCCGTATTGATCTCCTAAG
GAAAGGAGTGCAAGATGTCTCGGGCACAGCAGATGCTGTTGAAAAGGTGCAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAAGCACGAGGTTAGTACTCCAGCGAGCTCTAGCCATCTCGATCTGAAAAAGTCGTTCAAGCTCGCCGTTCGTTCCCTCCTCACTTCCTGTTCCAGGGAGGA
GTTTCGGGAATGCTTTTTGAGATTTACAAATGCGGAGCAAGAATATCTTCATCGTCTTTTCATTCAGGTTATAACTTCTTTGCATGGAAACATAGAGGACGAGTTTGAGT
CATTGTGCATTGAAACACAGGTGGGACCTATACTTGATAATGTTGAACAACTTTTGGAAGAACAAGGTCTAGATCCTTTATATTCCAAGAAGACTAATATAATGGATATT
GCTAATTATCTGTCCATGACAAAGAAGAATGAGATCCAGCGCTTGAAGGATATGCTGAAAACGGCTGAGGAACAGAACCAGCATGTTCAAGCCCGTATTGATCTCCTAAG
GAAAGGAGTGCAAGATGTCTCGGGCACAGCAGATGCTGTTGAAAAGGTGCAA
Protein sequenceShow/hide protein sequence
MEKKHEVSTPASSSHLDLKKSFKLAVRSLLTSCSREEFRECFLRFTNAEQEYLHRLFIQVITSLHGNIEDEFESLCIETQVGPILDNVEQLLEEQGLDPLYSKKTNIMDI
ANYLSMTKKNEIQRLKDMLKTAEEQNQHVQARIDLLRKGVQDVSGTADAVEKVQ