; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002617 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002617
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionVQ motif-containing protein 22-like
Genome locationscaffold111:171269..171862
RNA-Seq ExpressionMS002617
SyntenyMS002617
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039609 - VQ motif-containing protein 15/22


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044998.1 VQ motif-containing protein 22-like [Cucumis melo var. makuwa]1.7e-6573.23Show/hide
Query:  MMFADRVSDATAVATTSAAVGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGI
        M+FADRVSDATA A T             S GLNP+GRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPF SSIS     PNFSLGFGGI
Subjt:  MMFADRVSDATAVATTSAAVGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGI

Query:  RQSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF
        RQSNF    N  +SP PSGYL QQP   + ++PQ F+FP  AHGGDFLQRLSA RPA GGV  DGFL+ESAVSSQIP AG SADSSNESN GNG LLF
Subjt:  RQSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF

XP_008451884.1 PREDICTED: VQ motif-containing protein 22-like [Cucumis melo]3.7e-6573.23Show/hide
Query:  MMFADRVSDATAVATTSAAVGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGI
        M+FADRVSDATA A T             S GLNP+GRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPF SSIS     PNFSLGFGGI
Subjt:  MMFADRVSDATAVATTSAAVGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGI

Query:  RQSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF
        RQSNF    N  +SP PSGYL QQP   + ++PQ F+FP  AHGGDFLQRLSA RPA GGV  DGFL+ESAVSSQIP AG SADSSNESN GNG LLF
Subjt:  RQSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF

XP_011653250.1 VQ motif-containing protein 22 [Cucumis sativus]2.8e-6573.74Show/hide
Query:  MMFADRVSDATAVATTSAAVGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGI
        M F DRVSDAT V TT+A+V     N   S GLNP+GRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPF SSIS     PNFSLGFGGI
Subjt:  MMFADRVSDATAVATTSAAVGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGI

Query:  RQSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF
         QSNF    N  +SP PSGYL QQP   + ++PQ FMFP  AHGGDFLQRLSA RPA G V  DGFL+ESAVSSQIP AG SADSSNESN GNG LLF
Subjt:  RQSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF

XP_022136425.1 VQ motif-containing protein 22-like [Momordica charantia]6.1e-10097.47Show/hide
Query:  MMFADRVSDATAVATTSAAVGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGI
        MMFADRVSDATAVATTS AVGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGI
Subjt:  MMFADRVSDATAVATTSAAVGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGI

Query:  RQSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF
        RQSNFGNLPNVGMSP PSGYLQQQPQFYHQNHP+ FMFPAGAHGGDFLQRLSATRPA GGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF
Subjt:  RQSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF

XP_038900813.1 VQ motif-containing protein 22 [Benincasa hispida]9.8e-6675.25Show/hide
Query:  MMFADRVSDATAVATTSAAVGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGI
        M+FADRVSDATAV TT+A+ G++AG    S GLNP+GRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSIS     PNFSLGF GI
Subjt:  MMFADRVSDATAVATTSAAVGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGI

Query:  RQSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF
        RQSNF   PN  +SP PSGYL QQP  ++ ++PQ F+FP  AHGGDFLQRLSA RPA GGV  DGFL ESAV SQIP AG SA SSNESN GNG LLF
Subjt:  RQSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF

TrEMBL top hitse value%identityAlignment
A0A1S3BTN7 VQ motif-containing protein 22-like1.8e-6573.23Show/hide
Query:  MMFADRVSDATAVATTSAAVGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGI
        M+FADRVSDATA A T             S GLNP+GRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPF SSIS     PNFSLGFGGI
Subjt:  MMFADRVSDATAVATTSAAVGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGI

Query:  RQSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF
        RQSNF    N  +SP PSGYL QQP   + ++PQ F+FP  AHGGDFLQRLSA RPA GGV  DGFL+ESAVSSQIP AG SADSSNESN GNG LLF
Subjt:  RQSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF

A0A5A7TQ26 VQ motif-containing protein 22-like8.1e-6673.23Show/hide
Query:  MMFADRVSDATAVATTSAAVGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGI
        M+FADRVSDATA A T             S GLNP+GRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPF SSIS     PNFSLGFGGI
Subjt:  MMFADRVSDATAVATTSAAVGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGI

Query:  RQSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF
        RQSNF    N  +SP PSGYL QQP   + ++PQ F+FP  AHGGDFLQRLSA RPA GGV  DGFL+ESAVSSQIP AG SADSSNESN GNG LLF
Subjt:  RQSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF

A0A5D3CX65 VQ motif-containing protein 22-like1.8e-6573.23Show/hide
Query:  MMFADRVSDATAVATTSAAVGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGI
        M+FADRVSDATA A T             S GLNP+GRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPF SSIS     PNFSLGFGGI
Subjt:  MMFADRVSDATAVATTSAAVGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGI

Query:  RQSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF
        RQSNF    N  +SP PSGYL QQP   + ++PQ F+FP  AHGGDFLQRLSA RPA GGV  DGFL+ESAVSSQIP AG SADSSNESN GNG LLF
Subjt:  RQSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF

A0A6J1C3V2 VQ motif-containing protein 22-like2.9e-10097.47Show/hide
Query:  MMFADRVSDATAVATTSAAVGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGI
        MMFADRVSDATAVATTS AVGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGI
Subjt:  MMFADRVSDATAVATTSAAVGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGI

Query:  RQSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF
        RQSNFGNLPNVGMSP PSGYLQQQPQFYHQNHP+ FMFPAGAHGGDFLQRLSATRPA GGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF
Subjt:  RQSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF

A0A6J1FXJ7 VQ motif-containing protein 22-like3.4e-6474.87Show/hide
Query:  MMFADRVSDATAVATTSAA-VGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGG
        M+FA+RVSDATAV TTSAA +GSSAGN     GLNP+GRVGKP+RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPT  FASSIS     PNF LGF G
Subjt:  MMFADRVSDATAVATTSAA-VGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGG

Query:  IRQSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF
        I QSNFG  PN  +SP PS YL Q PQFYH N PQ FMFPA AHGGDF QR+S  RPA  GV  DGFLMESAVSSQIP+ G SADSSN++N GNGG LF
Subjt:  IRQSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF

SwissProt top hitse value%identityAlignment
Q9LIE6 VQ motif-containing protein 223.8e-1235.9Show/hide
Query:  FADRVSDATAVATTSAAVGSSAGNAGVSAGLNPD-GRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGIR
        F    + +TAV TT+A   +S     + + L+P+ GRV KP RRRSRASRRTPTTLLNTDT+NFRAMVQQ+TGGP+                ++ FG   
Subjt:  FADRVSDATAVATTSAAVGSSAGNAGVSAGLNPD-GRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGIR

Query:  QSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATG-GVVVDGFLMESAVSSQIPSA--GGSADSSNESNDGN
          N  +  ++  S  PS    QQ  + +   P   + P       ++  L+   P  G   + +   M S V   +  +  GGSA SS E+ + N
Subjt:  QSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATG-GVVVDGFLMESAVSSQIPSA--GGSADSSNESNDGN

Arabidopsis top hitse value%identityAlignment
AT1G35830.1 VQ motif-containing protein5.3e-0966.67Show/hide
Query:  RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSIS
        R+R+RASRR PTT+L TDT+NFRAMVQ+FTG P  PF+   S
Subjt:  RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSIS

AT3G22160.1 VQ motif-containing protein2.7e-1335.9Show/hide
Query:  FADRVSDATAVATTSAAVGSSAGNAGVSAGLNPD-GRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGIR
        F    + +TAV TT+A   +S     + + L+P+ GRV KP RRRSRASRRTPTTLLNTDT+NFRAMVQQ+TGGP+                ++ FG   
Subjt:  FADRVSDATAVATTSAAVGSSAGNAGVSAGLNPD-GRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGIR

Query:  QSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATG-GVVVDGFLMESAVSSQIPSA--GGSADSSNESNDGN
          N  +  ++  S  PS    QQ  + +   P   + P       ++  L+   P  G   + +   M S V   +  +  GGSA SS E+ + N
Subjt:  QSNFGNLPNVGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATG-GVVVDGFLMESAVSSQIPSA--GGSADSSNESNDGN

AT4G15120.1 VQ motif-containing protein7.1e-1435.75Show/hide
Query:  ATAVATTSAAVGSSAGNAGVSAGLNPDG-RVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGIRQSNF---
        AT+  TT+    +SA      + L+PD  RV KP RRRSRASRRTPTTL NTDT NFRAMVQQFTGGP+                ++ FG    S F   
Subjt:  ATAVATTSAAVGSSAGNAGVSAGLNPDG-RVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGIRQSNF---

Query:  GNLPNVGMSPAPSGYLQQQPQFYH---QNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGG
         + P  G+S +P  Y   Q Q  H       + +MF +  +         +T      V  DGF+               A+ S E   G GG
Subjt:  GNLPNVGMSPAPSGYLQQQPQFYH---QNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGG

AT4G39720.1 VQ motif-containing protein1.4e-0952.46Show/hide
Query:  AGVSAGLNPDGRVG--KPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSIS
        +  ++ L P   +G  K  ++RSRASRR PTT+L TDT+NFRAMVQ+FTG P PP  ++ S
Subjt:  AGVSAGLNPDGRVG--KPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSIS

AT5G65170.1 VQ motif-containing protein6.9e-0939.39Show/hide
Query:  RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGIRQSN---FGNLPNVGMSPAPSG--YLQQQPQFYHQNHPQTFM
        ++RSR SRR PTT+L TDT+NFRAMVQ+FTG P+ PF + +S       F L FG    S+       P+  +SP+     YL    +++H +  Q  +
Subjt:  RRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGIRQSN---FGNLPNVGMSPAPSG--YLQQQPQFYHQNHPQTFM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTTCGCCGATCGAGTTTCCGATGCCACCGCCGTCGCCACCACCTCCGCCGCCGTCGGAAGTTCTGCCGGGAACGCTGGGGTTTCTGCCGGCTTGAACCCGGATGG
TCGCGTCGGAAAGCCGGTTCGCCGCCGGTCCAGGGCGTCTCGCCGGACTCCGACGACGCTGCTCAACACGGACACCACGAATTTCAGAGCGATGGTTCAGCAGTTCACCG
GCGGTCCAACTCCGCCGTTCGCATCTTCGATTTCGCACCACGGCGGCGCCCCCAATTTCTCGCTAGGCTTCGGGGGGATTCGTCAATCGAATTTCGGCAATCTGCCCAAC
GTCGGGATGTCTCCGGCGCCGTCTGGTTACCTACAGCAGCAGCCGCAGTTCTACCATCAGAACCACCCCCAGACGTTCATGTTTCCGGCCGGCGCGCACGGCGGCGACTT
TCTGCAGAGGCTATCCGCGACTAGGCCGGCGACTGGCGGAGTCGTCGTAGACGGATTTCTGATGGAAAGCGCGGTTTCTTCTCAAATTCCGTCCGCCGGAGGTTCTGCAG
ATTCCTCCAACGAGAGCAATGACGGCAATGGCGGATTACTGTTC
mRNA sequenceShow/hide mRNA sequence
ATGATGTTCGCCGATCGAGTTTCCGATGCCACCGCCGTCGCCACCACCTCCGCCGCCGTCGGAAGTTCTGCCGGGAACGCTGGGGTTTCTGCCGGCTTGAACCCGGATGG
TCGCGTCGGAAAGCCGGTTCGCCGCCGGTCCAGGGCGTCTCGCCGGACTCCGACGACGCTGCTCAACACGGACACCACGAATTTCAGAGCGATGGTTCAGCAGTTCACCG
GCGGTCCAACTCCGCCGTTCGCATCTTCGATTTCGCACCACGGCGGCGCCCCCAATTTCTCGCTAGGCTTCGGGGGGATTCGTCAATCGAATTTCGGCAATCTGCCCAAC
GTCGGGATGTCTCCGGCGCCGTCTGGTTACCTACAGCAGCAGCCGCAGTTCTACCATCAGAACCACCCCCAGACGTTCATGTTTCCGGCCGGCGCGCACGGCGGCGACTT
TCTGCAGAGGCTATCCGCGACTAGGCCGGCGACTGGCGGAGTCGTCGTAGACGGATTTCTGATGGAAAGCGCGGTTTCTTCTCAAATTCCGTCCGCCGGAGGTTCTGCAG
ATTCCTCCAACGAGAGCAATGACGGCAATGGCGGATTACTGTTC
Protein sequenceShow/hide protein sequence
MMFADRVSDATAVATTSAAVGSSAGNAGVSAGLNPDGRVGKPVRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPTPPFASSISHHGGAPNFSLGFGGIRQSNFGNLPN
VGMSPAPSGYLQQQPQFYHQNHPQTFMFPAGAHGGDFLQRLSATRPATGGVVVDGFLMESAVSSQIPSAGGSADSSNESNDGNGGLLF