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MS002623 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002623
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description50S ribosomal protein L2, chloroplastic
Genome locationscaffold111:234445..234636
RNA-Seq ExpressionMS002623
SyntenyMS002623
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
A6MM78 50S ribosomal protein L2, chloroplastic3.2e-0547.76Show/hide
Query:  HELLLGSYQC---NNCRLIICLGFKGKKICYKHLYHKIDFRRNEKGIYIYGRIVIIKYNTYSNNKYI
        + L+ G ++C    N R II  G +G    +K LY KIDFRRNEK   IYGRIV I+Y+  + N YI
Subjt:  HELLLGSYQC---NNCRLIICLGFKGKKICYKHLYHKIDFRRNEKGIYIYGRIVIIKYNTYSNNKYI
P18663 50S ribosomal protein L2-A, chloroplastic3.2e-0547.76Show/hide
Query:  HELLLGSYQC---NNCRLIICLGFKGKKICYKHLYHKIDFRRNEKGIYIYGRIVIIKYNTYSNNKYI
        + L+ G ++C    N R II  G +G    +K LY KIDFRRNEK   IYGRIV I+Y+  + N YI
Subjt:  HELLLGSYQC---NNCRLIICLGFKGKKICYKHLYHKIDFRRNEKGIYIYGRIVIIKYNTYSNNKYI
Q09MB2 50S ribosomal protein L2, chloroplastic4.2e-0547.76Show/hide
Query:  HELLLGSYQC---NNCRLIICLGFKGKKICYKHLYHKIDFRRNEKGIYIYGRIVIIKYNTYSNNKYI
        + L+ G ++C    N R II  G +G    +K LY KIDFRRNEK   IYGRIV I+Y+  + N YI
Subjt:  HELLLGSYQC---NNCRLIICLGFKGKKICYKHLYHKIDFRRNEKGIYIYGRIVIIKYNTYSNNKYI
Q2PMM3 50S ribosomal protein L2-B, chloroplastic3.2e-0547.76Show/hide
Query:  HELLLGSYQC---NNCRLIICLGFKGKKICYKHLYHKIDFRRNEKGIYIYGRIVIIKYNTYSNNKYI
        + L+ G ++C    N R II  G +G    +K LY KIDFRRNEK   IYGRIV I+Y+  + N YI
Subjt:  HELLLGSYQC---NNCRLIICLGFKGKKICYKHLYHKIDFRRNEKGIYIYGRIVIIKYNTYSNNKYI
Q4VZK5 50S ribosomal protein L2, chloroplastic4.2e-0547.76Show/hide
Query:  HELLLGSYQC---NNCRLIICLGFKGKKICYKHLYHKIDFRRNEKGIYIYGRIVIIKYNTYSNNKYI
        + L+ G ++C    N R II  G +G    +K LY KIDFRRNEK   IYGRIV I+Y+  + N YI
Subjt:  HELLLGSYQC---NNCRLIICLGFKGKKICYKHLYHKIDFRRNEKGIYIYGRIVIIKYNTYSNNKYI
Arabidopsis top hitse value%identityAlignment
ATCG00830.1 ribosomal protein L21.6e-0444.78Show/hide
Query:  HELLLGSYQC---NNCRLIICLGFKGKKICYKHLYHKIDFRRNEKGIYIYGRIVIIKYNTYSNNKYI
        + L+ G + C    N R II    +G    +K LY KIDFRRN K   IYGRIV I+Y+  + N YI
Subjt:  HELLLGSYQC---NNCRLIICLGFKGKKICYKHLYHKIDFRRNEKGIYIYGRIVIIKYNTYSNNKYI
ATCG01310.1 ribosomal protein L21.6e-0444.78Show/hide
Query:  HELLLGSYQC---NNCRLIICLGFKGKKICYKHLYHKIDFRRNEKGIYIYGRIVIIKYNTYSNNKYI
        + L+ G + C    N R II    +G    +K LY KIDFRRN K   IYGRIV I+Y+  + N YI
Subjt:  HELLLGSYQC---NNCRLIICLGFKGKKICYKHLYHKIDFRRNEKGIYIYGRIVIIKYNTYSNNKYI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATGAATTGTTATTGGGTTCATATCAATGCAATAATTGTCGTTTAATTATATGTTTAGGTTTCAAAGGAAAAAAGATATGTTATAAGCATCTATATCATAAAATTGATTT
TCGACGAAATGAAAAAGGTATATATATATATGGTAGAATTGTAATAATAAAATACAATACATACTCAAATAACAAATATATA
mRNA sequenceShow/hide mRNA sequence
CATGAATTGTTATTGGGTTCATATCAATGCAATAATTGTCGTTTAATTATATGTTTAGGTTTCAAAGGAAAAAAGATATGTTATAAGCATCTATATCATAAAATTGATTT
TCGACGAAATGAAAAAGGTATATATATATATGGTAGAATTGTAATAATAAAATACAATACATACTCAAATAACAAATATATA
Protein sequenceShow/hide protein sequence
HELLLGSYQCNNCRLIICLGFKGKKICYKHLYHKIDFRRNEKGIYIYGRIVIIKYNTYSNNKYI