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MS002627 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002627
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLeucyl/phenylalanyl-tRNA--protein transferase
Genome locationscaffold111:267512..267791
RNA-Seq ExpressionMS002627
SyntenyMS002627
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAF2057401.1 unnamed protein product [Brassica napus]1.1e-0852.94Show/hide
Query:  MPVVDELDEGLDSRFLGGLLRRVLADDLARILLDSRNQAVAIGPISGAVVEGANYHRLPAGIAALKND
        M VV++LDE L+ RFL  LL RVLADDLAR+LL+S ++AV++  ++ +VVEG + H   +G++ALK D
Subjt:  MPVVDELDEGLDSRFLGGLLRRVLADDLARILLDSRNQAVAIGPISGAVVEGANYHRLPAGIAALKND

CAG7875228.1 unnamed protein product [Brassica rapa]1.3e-0955.88Show/hide
Query:  MPVVDELDEGLDSRFLGGLLRRVLADDLARILLDSRNQAVAIGPISGAVVEGANYHRLPAGIAALKND
        M VV+ LDE LD RFL  LL RVLADDLAR+LL+S ++AV++  ++ +VVEGA+ H   +G++ALK D
Subjt:  MPVVDELDEGLDSRFLGGLLRRVLADDLARILLDSRNQAVAIGPISGAVVEGANYHRLPAGIAALKND

KAF2608328.1 hypothetical protein F2Q68_00044531 [Brassica cretica]1.1e-0852.94Show/hide
Query:  MPVVDELDEGLDSRFLGGLLRRVLADDLARILLDSRNQAVAIGPISGAVVEGANYHRLPAGIAALKND
        M VV++LDE L+ RFL  LL RVLADDLAR+LL+S ++AV++  ++ +VVEG + H   +G++ALK D
Subjt:  MPVVDELDEGLDSRFLGGLLRRVLADDLARILLDSRNQAVAIGPISGAVVEGANYHRLPAGIAALKND

KHG19439.1 Leucyl/phenylalanyl-tRNA--protein transferase [Gossypium arboreum]2.1e-1056.52Show/hide
Query:  VVDELDEGLDSRFLGGLLRRVLADDLARILLDSRNQAVAIGPISGAVVEGANYHRLPAGIAALKNDDLF
        VV ELDE LD+RFLGG L  VL DDLAR+L   R+Q VAIG ++ AVVEG   H   +G++AL+++D F
Subjt:  VVDELDEGLDSRFLGGLLRRVLADDLARILLDSRNQAVAIGPISGAVVEGANYHRLPAGIAALKNDDLF

PPE02053.1 hypothetical protein GOBAR_DD00924 [Gossypium barbadense]9.3e-1157.97Show/hide
Query:  VVDELDEGLDSRFLGGLLRRVLADDLARILLDSRNQAVAIGPISGAVVEGANYHRLPAGIAALKNDDLF
        VV ELDE LD+RFLGG L  VLADDLAR+L   R+Q VAIG ++ AVVEG   H   +G+ AL+++D F
Subjt:  VVDELDEGLDSRFLGGLLRRVLADDLARILLDSRNQAVAIGPISGAVVEGANYHRLPAGIAALKNDDLF

TrEMBL top hitse value%identityAlignment
A0A0A0K8P4 Uncharacterized protein5.5e-1762.5Show/hide
Query:  MPVVDELDEGLDSRFLGGLLRRVLADDLARILLDSRNQAVAIGPISGAVVEGANYHRLPAGIAALK-NDDLFGLRNFTIVG-FLALCV
        MP++DEL++GL+ R L GLL  VLADDL  +LLD  NQAVAI  IS  VVEGAN  RLP GI  LK N+ L GLRNFTI    L LCV
Subjt:  MPVVDELDEGLDSRFLGGLLRRVLADDLARILLDSRNQAVAIGPISGAVVEGANYHRLPAGIAALK-NDDLFGLRNFTIVG-FLALCV

A0A0B0PTV9 Leucyl/phenylalanyl-tRNA--protein transferase1.0e-1056.52Show/hide
Query:  VVDELDEGLDSRFLGGLLRRVLADDLARILLDSRNQAVAIGPISGAVVEGANYHRLPAGIAALKNDDLF
        VV ELDE LD+RFLGG L  VL DDLAR+L   R+Q VAIG ++ AVVEG   H   +G++AL+++D F
Subjt:  VVDELDEGLDSRFLGGLLRRVLADDLARILLDSRNQAVAIGPISGAVVEGANYHRLPAGIAALKNDDLF

A0A2T8JD06 Uncharacterized protein7.2e-0947.19Show/hide
Query:  VDELDEGLDSRFLGGLLRRVLADDLARILLDSRNQAVAIGPISGAVVEGANYHRLPAGIAALKND-DLFGLRNFTIVGFLALCVSPSRR
        VDELDE LD+  LGGLL  VLAD L  +L  + ++AVA+G ++GA++E A+ HRL AG  AL+ D  L GL+    +  L L +   RR
Subjt:  VDELDEGLDSRFLGGLLRRVLADDLARILLDSRNQAVAIGPISGAVVEGANYHRLPAGIAALKND-DLFGLRNFTIVGFLALCVSPSRR

A0A3P5ZDC7 Uncharacterized protein6.5e-1055.88Show/hide
Query:  MPVVDELDEGLDSRFLGGLLRRVLADDLARILLDSRNQAVAIGPISGAVVEGANYHRLPAGIAALKND
        M VV+ LDE LD RFL  LL RVLADDLAR+LL+S ++AV++  ++ +VVEGA+ H   +G++ALK D
Subjt:  MPVVDELDEGLDSRFLGGLLRRVLADDLARILLDSRNQAVAIGPISGAVVEGANYHRLPAGIAALKND

A0A3P6FSY1 Uncharacterized protein5.5e-0952.94Show/hide
Query:  MPVVDELDEGLDSRFLGGLLRRVLADDLARILLDSRNQAVAIGPISGAVVEGANYHRLPAGIAALKND
        M VV++LDE L+ RFL  LL RVLADDLAR+LL+S ++AV++  ++ +VVEG + H   +G++ALK D
Subjt:  MPVVDELDEGLDSRFLGGLLRRVLADDLARILLDSRNQAVAIGPISGAVVEGANYHRLPAGIAALKND

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGTAGTTGACGAGCTTGATGAAGGCCTTGACTCGCGATTTCTTGGCGGTCTTCTTAGAAGAGTCCTTGCGGATGACCTTGCTCGGATACTTCTTGATTCCCGCAA
CCAAGCAGTGGCCATAGGCCCGATCTCGGGTGCCGTCGTCGAAGGCGCGAATTATCACCGCCTTCCGGCCGGCATAGCGGCCTTGAAGAACGACGACTTGTTCGGCTTGA
GAAACTTCACCATTGTCGGATTTCTCGCTCTCTGTGTTTCCCCTTCACGTCGGCTC
mRNA sequenceShow/hide mRNA sequence
ATGCCTGTAGTTGACGAGCTTGATGAAGGCCTTGACTCGCGATTTCTTGGCGGTCTTCTTAGAAGAGTCCTTGCGGATGACCTTGCTCGGATACTTCTTGATTCCCGCAA
CCAAGCAGTGGCCATAGGCCCGATCTCGGGTGCCGTCGTCGAAGGCGCGAATTATCACCGCCTTCCGGCCGGCATAGCGGCCTTGAAGAACGACGACTTGTTCGGCTTGA
GAAACTTCACCATTGTCGGATTTCTCGCTCTCTGTGTTTCCCCTTCACGTCGGCTC
Protein sequenceShow/hide protein sequence
MPVVDELDEGLDSRFLGGLLRRVLADDLARILLDSRNQAVAIGPISGAVVEGANYHRLPAGIAALKNDDLFGLRNFTIVGFLALCVSPSRRL