; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002643 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002643
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranslation initiation factor IF-2
Genome locationscaffold111:409200..413934
RNA-Seq ExpressionMS002643
SyntenyMS002643
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600462.1 hypothetical protein SDJN03_05695, partial [Cucurbita argyrosperma subsp. sororia]5.3e-21484.21Show/hide
Query:  MSRSIGRKVPGISFLPNATKLSFVPF--SSSSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPSF
        MSRSIGRKVPG+SFL NA KL FVPF  SSSSSSGGHGRGRGRGGSP+H  GGPFDF+SRVPGQEDSN SK ESVDS GTSGLGHGRGKPSPSS ILPS 
Subjt:  MSRSIGRKVPGISFLPNATKLSFVPF--SSSSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPSF

Query:  SSFTPSVKSSSAGRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQE
        SSFTPSVKSSSAGRGR  GS PIRS PES SS +SD E KKPVFFSKDNA +SA S   GALDR VGER+LPDS LSVLSG GRGKPMKQPVPE QPKQE
Subjt:  SSFTPSVKSSSAGRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQE

Query:  NRHLRPRQESGGRGIGGPVRGVGGGPRMSRDEGVRNTGR-MARGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGR-GPFRTGERGERGRAQDMEDGYA
        NRHLRPRQE+GGRG  GP RG GGGPR+SRDE VRNTGR M RGGPDGED GGGRGRGGFRGRG     G FRGRGR G FRTGERG+RGR QDMEDGYA
Subjt:  NRHLRPRQESGGRGIGGPVRGVGGGPRMSRDEGVRNTGR-MARGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGR-GPFRTGERGERGRAQDMEDGYA

Query:  AGLYLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKPPIPLRDVLEMTKPFLMAYENIQS
        +GLYLGDNADGEKLAKRIGTE+MNQLVEGFEEMSGR LPSPLEE Y++ M TNYMIECEPEYLMGDFE+NPDIDE PPIPLRD LE  KPFLMAYE IQS
Subjt:  AGLYLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKPPIPLRDVLEMTKPFLMAYENIQS

Query:  HEEWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK
        HEEWEEIVEE M QRVPLLKEIVD YSGPDRVTAKQQQ ELERVAKTLPQSAPNS+K+FTNRAVLSLQSNPGWGFD+KCQFMDKLVREFSQ+Y+
Subjt:  HEEWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK

XP_022136793.1 uncharacterized protein LOC111008406 [Momordica charantia]1.3e-26598.38Show/hide
Query:  MSRSIGRKVPGISFLPNATKLSFVPF---SSSSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPS
        MSRSIGRKVPG+SFLPNATKLSFVPF   SSSSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKP PSSPILPS
Subjt:  MSRSIGRKVPGISFLPNATKLSFVPF---SSSSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPS

Query:  FSSFTPSVKSSSAGRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQ
        FSSFTPSVKSSSAGRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQ
Subjt:  FSSFTPSVKSSSAGRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQ

Query:  ENRHLRPRQESGGRGIGGPVRGVGGGPRMSRDEGVRNTGRM-ARGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGRGPFRTGERGERGRAQDMEDGYA
        ENRHLRPRQESGGRGIGGPVRGVGGGPRMSRDEGVRNTGRM +RGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGRGPFRTGERGERGRAQDMEDGYA
Subjt:  ENRHLRPRQESGGRGIGGPVRGVGGGPRMSRDEGVRNTGRM-ARGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGRGPFRTGERGERGRAQDMEDGYA

Query:  AGLYLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKPPIPLRDVLEMTKPFLMAYENIQS
        AGLYLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFE+NPDIDEKPPIPLRDVLEMTKPFLMAYENIQS
Subjt:  AGLYLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKPPIPLRDVLEMTKPFLMAYENIQS

Query:  HEEWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK
        HEEWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK
Subjt:  HEEWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK

XP_022942601.1 uncharacterized protein LOC111447586 [Cucurbita moschata]3.1e-21483.98Show/hide
Query:  MSRSIGRKVPGISFLPNATKLSFVPF--SSSSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPSF
        MSRSIGRKVPG+SFL NA KL FVPF  SSSSSSGGHGRGRGRGGSP+H  GGPFDF+SRVPGQEDSN SK ESVDS GTSGLGHG GKPSPSS ILPS 
Subjt:  MSRSIGRKVPGISFLPNATKLSFVPF--SSSSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPSF

Query:  SSFTPSVKSSSAGRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQE
        SSFTPSVKSS AGRGR  GS PIRS PES SS +SD E  KPVFFSKDNA +SA S R GALDR VGER+LPDS LSVLSG GRGKPMKQPVPE QPKQE
Subjt:  SSFTPSVKSSSAGRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQE

Query:  NRHLRPRQESGGRGIGGPVRGVGGGPRMSRDEGVRNTGR-MARGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGRGPFRTGERGERGRAQDMEDGYAA
        NRHLRPRQE+GGRG  GP RG GGGPR+SRDE VRNTGR M RGGPDGED GGGRGRGGFRGRG     G FRGRGRG FRTGERG+RGR QDMEDGYA+
Subjt:  NRHLRPRQESGGRGIGGPVRGVGGGPRMSRDEGVRNTGR-MARGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGRGPFRTGERGERGRAQDMEDGYAA

Query:  GLYLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKPPIPLRDVLEMTKPFLMAYENIQSH
        GLYLGDNADGEKLAKRIGTE+MNQLVEGFEEMSGR LPSPLEE Y++ M TNYMIECEPEYLMGDFE+NPDIDE PPIPLRD LE  KPFLMAYE IQSH
Subjt:  GLYLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKPPIPLRDVLEMTKPFLMAYENIQSH

Query:  EEWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK
        EEWEEIVEE M QRVPLLKEIVD YSGPDRVTAKQQQ ELERVAKTLPQSAPNS+K+FTNRAVLSLQSNPGWGFD+KCQFMDKLVREFSQ+Y+
Subjt:  EEWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK

XP_022980643.1 uncharacterized protein LOC111479946 [Cucurbita maxima]1.5e-21684.35Show/hide
Query:  MSRSIGRKVPGISFLPNATKLSFVPF-SSSSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPSFS
        MSRSIGRKVPG+SFL NA KL FVPF SSSSSSGGHGRGRGR GSP+H  GGPFDF+SRVPGQEDSN SK ESVDS GTSGLGHGRGKPSPSS ILPS S
Subjt:  MSRSIGRKVPGISFLPNATKLSFVPF-SSSSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPSFS

Query:  SFTPSVKSSSAGRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQEN
        SFTPSVKSSSAGRGR  GS PIRS PES SS  SD E KKPVFFSKDNAA+SA S R GALDR VGERNLPDS LSVLSG GRGKPMKQP+PE QPKQEN
Subjt:  SFTPSVKSSSAGRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQEN

Query:  RHLRPRQESGGRGIGGPVRGVGGGPRMSRDEGVRNTGR-MARGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGRGPFRTGERGERGRAQDMEDGYAAG
        RHLRPRQE+GGRG  GP RG GGGPR+SRDE VRNTGR M+RGGPDGEDGGG       RGRGGFRGRG FRGRGRG FRTGERGERGR QDMEDGYA+G
Subjt:  RHLRPRQESGGRGIGGPVRGVGGGPRMSRDEGVRNTGR-MARGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGRGPFRTGERGERGRAQDMEDGYAAG

Query:  LYLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKPPIPLRDVLEMTKPFLMAYENIQSHE
        LYLGDNADGEKLAKRIGTE+MNQLVEG EEMSGR LPSPLEE Y++ M  NYMIECEPEYLMGDFE+NPDIDE PPIPLRD LE  KPFLMAYE IQSHE
Subjt:  LYLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKPPIPLRDVLEMTKPFLMAYENIQSHE

Query:  EWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK
        EWEEIVEE M QRVPLLKEIVD YSGPDRVTAKQQQ ELERVAKTLPQSAPNS+K+FTNRAVLSLQSNPGWGFD+KCQFMDKLVREFSQ+Y+
Subjt:  EWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK

XP_023544535.1 uncharacterized protein LOC111804080 [Cucurbita pepo subsp. pepo]1.2e-21383.57Show/hide
Query:  MSRSIGRKVPGISFLPNATKLSFVPF--SSSSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPSF
        MSRSIGRKVPG+SFL NA KL FVPF  SSSSSSGGHG+GRGRGGSP+H  GGPFDF+SRVPGQEDSN SK ESVDS GTSGLGHGRGKPSPSS ILPS 
Subjt:  MSRSIGRKVPGISFLPNATKLSFVPF--SSSSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPSF

Query:  SSFTPSVKSSSAGRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQE
        SSFTPSVKSSSAGRGR  GS PIRS PES SS  SD E KKPVFFSKDNA +SA S R GAL    GERNLPDS LSVLSG GRGKPMKQP+PE QPKQE
Subjt:  SSFTPSVKSSSAGRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQE

Query:  NRHLRPRQESGGRGIGGPVRGVGGGPRMSRDEGVRNTGR-MARGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGRGPFRTGERGERGRAQDMEDGYAA
        NRHLRPRQE+GGRG  GP RG GGGPR+SRDE VRNTGR M+RGGPDGED GGGRGRGGFRGRG     G FRGRGRG FRTGERG+RGR QDMEDGYA+
Subjt:  NRHLRPRQESGGRGIGGPVRGVGGGPRMSRDEGVRNTGR-MARGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGRGPFRTGERGERGRAQDMEDGYAA

Query:  GLYLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKPPIPLRDVLEMTKPFLMAYENIQSH
        GLYLGDNADGEKLAKRIGTE+MNQLVEGFEEMSGR LPSPLEE Y++ M TNYMIECEPEYLMGDFE+NPDIDE PPIPLRD LE  KPFLMAYE I+SH
Subjt:  GLYLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKPPIPLRDVLEMTKPFLMAYENIQSH

Query:  EEWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK
        EEWEEIVEE M QRVPLLKEIVD YSGPDRVTAKQQQ ELERVAKTLPQSAPNS+K+FTNRAVLSLQSNPGWGFD+KCQFMDKLVREFSQ+Y+
Subjt:  EEWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK

TrEMBL top hitse value%identityAlignment
A0A0A0KVG1 Uncharacterized protein9.3e-18074.24Show/hide
Query:  MSRSIGRKVPGISFLPNATKLSFVPFSS--SSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPSF
        MSRSIGRKV G S L NA KL  VPFSS  SSSSGGHGRGRGRG  PS    GPFDFT  VP QE SNASKQE +DS  T GLGHGRGKP+PSSP+ PSF
Subjt:  MSRSIGRKVPGISFLPNATKLSFVPFSS--SSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPSF

Query:  SSFTPSVKSSSAGRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQE
        SSF+PSV+ SS GRGR   SP IRS PE       D EPKKPVFFSK+NA +SAAST LG L R  GERNLP+SL S  SGVGRGKPMKQPVPEDQPKQE
Subjt:  SSFTPSVKSSSAGRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQE

Query:  NRHLRPRQESGGRGIGGPVRGVGGGPRMSRDEGVRNTGRM-ARGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGRGPFRTGERGERGRAQDMEDGYAA
        NRHLRPRQE  G G G   RG G  PR+ R E  RNT RM ++ GPDGE  GGGRG  G+RGRG    RG +R   RG FRTGER ER    D EDGYAA
Subjt:  NRHLRPRQESGGRGIGGPVRGVGGGPRMSRDEGVRNTGRM-ARGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGRGPFRTGERGERGRAQDMEDGYAA

Query:  GLYLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKPPIPLRDVLEMTKPFLMAYENIQSH
        GLYLG+N DGE+LAKRIGTENMN+LVEGFEEMSGR LPSPL ++YLDGM TN+MIECEPEYLMGDFENNPDIDE PPIPLRD LE  KPFLMAYENIQSH
Subjt:  GLYLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKPPIPLRDVLEMTKPFLMAYENIQSH

Query:  EEWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK
        EEWEEIVEE MQ  VPLLKEIVD Y GPDRVTAK+QQ ELERVAKTLPQSAPNS+KQFTNR VLSLQSNPGWGFD+K Q MDKLV  FS++YK
Subjt:  EEWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK

A0A5D3CZK6 Translation initiation factor IF-29.3e-18074.75Show/hide
Query:  MSRSIGRKVPGISFLPNATKLSFVPFSSSSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPSFSS
        MSRSIGRKVPG S L NA KL  VPF SSSSSGGHGRGRGRG  PS    GPFDFT  VP QE  NASKQE +DS  T GLGHGRG P+PSSPI PSFSS
Subjt:  MSRSIGRKVPGISFLPNATKLSFVPFSSSSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPSFSS

Query:  FTPSVKSSSAGRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQENR
        F+PSV+ SS GRGR   SP IRS PE       D EPKKPVFFS++NA +SAAST LG L R  GERNLPDSL S  SGVGRGKPMKQPVPEDQPKQENR
Subjt:  FTPSVKSSSAGRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQENR

Query:  HLRPRQESGGRGIGGPVRGVGGGPRMSRDEGVRNTGRMA-RGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGRGPFRTGERGERGRAQDMEDGYAAGL
        HLRPRQE  GRG GG  R  G  PR+ R E  RNT RMA RGGPDGE  GGGRG  G+RGRG    RG FR   RG FRTGER +R   QD EDGYAAGL
Subjt:  HLRPRQESGGRGIGGPVRGVGGGPRMSRDEGVRNTGRMA-RGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGRGPFRTGERGERGRAQDMEDGYAAGL

Query:  YLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKPPIPLRDVLEMTKPFLMAYENIQSHEE
        YLG+N DGE+LAK++G E MNQLVEGFEEMSGR LPSPLE+  LDGM  N+MIECEPEYLMGDFE+NPDIDE PPI LRD  E  KPFLMAYENIQSHEE
Subjt:  YLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKPPIPLRDVLEMTKPFLMAYENIQSHEE

Query:  WEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK
        WEEIVEE MQ  VPL+KEIVD YSGPDRVTAK+QQ ELERVAKTLPQSAPNS+KQFTNRAVLSLQSNPGWGFD+KCQFMDKLV  FSQ+YK
Subjt:  WEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK

A0A6J1C8I7 uncharacterized protein LOC1110084066.5e-26698.38Show/hide
Query:  MSRSIGRKVPGISFLPNATKLSFVPF---SSSSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPS
        MSRSIGRKVPG+SFLPNATKLSFVPF   SSSSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKP PSSPILPS
Subjt:  MSRSIGRKVPGISFLPNATKLSFVPF---SSSSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPS

Query:  FSSFTPSVKSSSAGRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQ
        FSSFTPSVKSSSAGRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQ
Subjt:  FSSFTPSVKSSSAGRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQ

Query:  ENRHLRPRQESGGRGIGGPVRGVGGGPRMSRDEGVRNTGRM-ARGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGRGPFRTGERGERGRAQDMEDGYA
        ENRHLRPRQESGGRGIGGPVRGVGGGPRMSRDEGVRNTGRM +RGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGRGPFRTGERGERGRAQDMEDGYA
Subjt:  ENRHLRPRQESGGRGIGGPVRGVGGGPRMSRDEGVRNTGRM-ARGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGRGPFRTGERGERGRAQDMEDGYA

Query:  AGLYLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKPPIPLRDVLEMTKPFLMAYENIQS
        AGLYLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFE+NPDIDEKPPIPLRDVLEMTKPFLMAYENIQS
Subjt:  AGLYLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKPPIPLRDVLEMTKPFLMAYENIQS

Query:  HEEWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK
        HEEWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK
Subjt:  HEEWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK

A0A6J1FPB3 uncharacterized protein LOC1114475861.5e-21483.98Show/hide
Query:  MSRSIGRKVPGISFLPNATKLSFVPF--SSSSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPSF
        MSRSIGRKVPG+SFL NA KL FVPF  SSSSSSGGHGRGRGRGGSP+H  GGPFDF+SRVPGQEDSN SK ESVDS GTSGLGHG GKPSPSS ILPS 
Subjt:  MSRSIGRKVPGISFLPNATKLSFVPF--SSSSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPSF

Query:  SSFTPSVKSSSAGRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQE
        SSFTPSVKSS AGRGR  GS PIRS PES SS +SD E  KPVFFSKDNA +SA S R GALDR VGER+LPDS LSVLSG GRGKPMKQPVPE QPKQE
Subjt:  SSFTPSVKSSSAGRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQE

Query:  NRHLRPRQESGGRGIGGPVRGVGGGPRMSRDEGVRNTGR-MARGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGRGPFRTGERGERGRAQDMEDGYAA
        NRHLRPRQE+GGRG  GP RG GGGPR+SRDE VRNTGR M RGGPDGED GGGRGRGGFRGRG     G FRGRGRG FRTGERG+RGR QDMEDGYA+
Subjt:  NRHLRPRQESGGRGIGGPVRGVGGGPRMSRDEGVRNTGR-MARGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGRGPFRTGERGERGRAQDMEDGYAA

Query:  GLYLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKPPIPLRDVLEMTKPFLMAYENIQSH
        GLYLGDNADGEKLAKRIGTE+MNQLVEGFEEMSGR LPSPLEE Y++ M TNYMIECEPEYLMGDFE+NPDIDE PPIPLRD LE  KPFLMAYE IQSH
Subjt:  GLYLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKPPIPLRDVLEMTKPFLMAYENIQSH

Query:  EEWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK
        EEWEEIVEE M QRVPLLKEIVD YSGPDRVTAKQQQ ELERVAKTLPQSAPNS+K+FTNRAVLSLQSNPGWGFD+KCQFMDKLVREFSQ+Y+
Subjt:  EEWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK

A0A6J1IZW9 uncharacterized protein LOC1114799467.3e-21784.35Show/hide
Query:  MSRSIGRKVPGISFLPNATKLSFVPF-SSSSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPSFS
        MSRSIGRKVPG+SFL NA KL FVPF SSSSSSGGHGRGRGR GSP+H  GGPFDF+SRVPGQEDSN SK ESVDS GTSGLGHGRGKPSPSS ILPS S
Subjt:  MSRSIGRKVPGISFLPNATKLSFVPF-SSSSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPSFS

Query:  SFTPSVKSSSAGRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQEN
        SFTPSVKSSSAGRGR  GS PIRS PES SS  SD E KKPVFFSKDNAA+SA S R GALDR VGERNLPDS LSVLSG GRGKPMKQP+PE QPKQEN
Subjt:  SFTPSVKSSSAGRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQEN

Query:  RHLRPRQESGGRGIGGPVRGVGGGPRMSRDEGVRNTGR-MARGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGRGPFRTGERGERGRAQDMEDGYAAG
        RHLRPRQE+GGRG  GP RG GGGPR+SRDE VRNTGR M+RGGPDGEDGGG       RGRGGFRGRG FRGRGRG FRTGERGERGR QDMEDGYA+G
Subjt:  RHLRPRQESGGRGIGGPVRGVGGGPRMSRDEGVRNTGR-MARGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGRGPFRTGERGERGRAQDMEDGYAAG

Query:  LYLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKPPIPLRDVLEMTKPFLMAYENIQSHE
        LYLGDNADGEKLAKRIGTE+MNQLVEG EEMSGR LPSPLEE Y++ M  NYMIECEPEYLMGDFE+NPDIDE PPIPLRD LE  KPFLMAYE IQSHE
Subjt:  LYLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKPPIPLRDVLEMTKPFLMAYENIQSHE

Query:  EWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK
        EWEEIVEE M QRVPLLKEIVD YSGPDRVTAKQQQ ELERVAKTLPQSAPNS+K+FTNRAVLSLQSNPGWGFD+KCQFMDKLVREFSQ+Y+
Subjt:  EWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G53645.1 hydroxyproline-rich glycoprotein family protein1.8e-7942.75Show/hide
Query:  FSSSSSSGGHGRGRGRG--GSPSHGGGGPFDFTSR--VPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPSFSSFTPSVKSSSAGRGR-------
        FSSSS S G GRGRG G  G     G G F       VPG+E S+A            G GHGRG+P  S  I P+F+SF  S  S S GRGR       
Subjt:  FSSSSSSGGHGRGRGRG--GSPSHGGGGPFDFTSR--VPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPSFSSFTPSVKSSSAGRGR-------

Query:  ---VAGSPPIRSTP----ESGSSKQSDLEPK------KPVFFSKDNAANSAASTRLGALDRGV----------GERNLPDSLLSVL-------SGVGRGK
            A  PP +S P    +   S+Q   +P+      +P     D +  S    +L  +              G+ + PD++ + L       SG GRGK
Subjt:  ---VAGSPPIRSTP----ESGSSKQSDLEPK------KPVFFSKDNAANSAASTRLGALDRGV----------GERNLPDSLLSVL-------SGVGRGK

Query:  PMKQPVP---EDQ-------PKQENRHLRPRQESGGRGIGGPVRGVGGGPRMSRDE-GVRNTGRMARGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRG
        P+ +  P   ED        P  + + ++P+Q+       G  +     P++S +E G R    ++RG  +G   GG  GRG  RGRG  RGRG  RGRG
Subjt:  PMKQPVP---EDQ-------PKQENRHLRPRQESGGRGIGGPVRGVGGGPRMSRDE-GVRNTGRMARGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRG

Query:  RGPFRTGERGERGRAQDMEDGYAAGLYLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKP
           +R  ++ E G  + M       ++ GD+ADGEK A+++G E M  L EGFEE+  + LPS   +  +D   TN MIECEPEY+M DF +NPDIDEKP
Subjt:  RGPFRTGERGERGRAQDMEDGYAAGLYLGDNADGEKLAKRIGTENMNQLVEGFEEMSGRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKP

Query:  PIPLRDVLEMTKPFLMAYENIQSHEEWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDR
        P+ LR+ LE  KPF++AYE I+  EEWEE + E M Q  PL+KEIVD+YSGPDRVTAK+Q EEL+R+A TLP SAP+S+K+F +RA L+L+SNPGWGFD+
Subjt:  PIPLRDVLEMTKPFLMAYENIQSHEEWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERVAKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDR

Query:  KCQFMDKLVREFSQQYK
        K QFMDKLV E SQ YK
Subjt:  KCQFMDKLVREFSQQYK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGATCCATCGGAAGAAAGGTTCCAGGAATCTCATTTCTACCCAATGCGACTAAACTAAGCTTTGTGCCGTTTTCTTCTTCTTCTTCTTCCGGTGGCCATGGTCG
TGGCCGGGGTCGAGGTGGTTCTCCCTCCCATGGTGGAGGTGGACCCTTTGATTTCACTTCTCGAGTCCCGGGTCAAGAAGATTCAAATGCGTCCAAGCAAGAATCCGTGG
ATTCTCCTGGTACTTCTGGGTTAGGACATGGGCGTGGCAAGCCCAGTCCTTCCTCCCCAATTCTTCCATCTTTCTCTTCCTTTACGCCCTCCGTTAAGTCCTCGTCTGCT
GGTCGGGGTAGAGTCGCTGGTTCGCCACCGATTCGATCTACTCCCGAGTCAGGCTCATCGAAGCAATCTGATTTGGAGCCGAAGAAACCTGTGTTTTTCTCGAAGGATAA
TGCGGCGAACTCGGCTGCAAGTACTCGACTTGGCGCGTTGGACAGGGGTGTGGGGGAGAGAAACTTGCCCGACAGTTTACTTTCTGTGTTATCCGGTGTTGGCCGAGGAA
AACCCATGAAGCAACCAGTCCCAGAAGATCAACCAAAGCAGGAGAATCGTCATCTGAGACCTAGACAAGAGTCGGGTGGTCGTGGGATTGGTGGGCCTGTAAGGGGCGTT
GGTGGGGGCCCGCGAATGAGCCGCGATGAAGGTGTGAGGAACACTGGTAGGATGGCAAGAGGTGGTCCTGATGGTGAAGATGGTGGTGGAGGTAGAGGAAGAGGCGGGTT
TCGGGGCAGAGGAGGCTTCCGAGGCAGAGGAGGGTTTAGAGGGAGAGGTAGGGGACCGTTCAGAACTGGGGAGAGAGGAGAGAGAGGAAGAGCTCAAGATATGGAGGATG
GATATGCAGCAGGGCTTTATTTAGGTGACAATGCAGATGGTGAGAAGCTAGCAAAGAGGATTGGAACAGAAAATATGAACCAACTGGTTGAAGGGTTTGAAGAGATGAGT
GGTAGAACGCTGCCTTCGCCACTGGAAGAAGAGTATTTAGATGGGATGCATACTAATTATATGATAGAGTGTGAGCCAGAGTACTTGATGGGGGACTTTGAAAATAACCC
GGATATTGATGAGAAGCCACCTATTCCTCTTCGGGATGTACTCGAGATGACGAAACCTTTCTTAATGGCGTATGAAAACATTCAAAGCCACGAAGAGTGGGAGGAAATCG
TGGAAGAAATCATGCAGCAGAGAGTTCCATTGCTAAAGGAGATAGTAGACTATTACAGTGGACCGGATAGAGTAACTGCAAAGCAACAGCAAGAGGAACTAGAAAGAGTT
GCAAAAACACTTCCACAAAGTGCGCCTAATTCCATAAAGCAGTTTACCAATCGTGCAGTTCTTTCTCTGCAGAGCAACCCAGGATGGGGATTTGACAGGAAATGCCAGTT
CATGGACAAGCTTGTGAGGGAGTTCTCCCAGCAATACAAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGATCCATCGGAAGAAAGGTTCCAGGAATCTCATTTCTACCCAATGCGACTAAACTAAGCTTTGTGCCGTTTTCTTCTTCTTCTTCTTCCGGTGGCCATGGTCG
TGGCCGGGGTCGAGGTGGTTCTCCCTCCCATGGTGGAGGTGGACCCTTTGATTTCACTTCTCGAGTCCCGGGTCAAGAAGATTCAAATGCGTCCAAGCAAGAATCCGTGG
ATTCTCCTGGTACTTCTGGGTTAGGACATGGGCGTGGCAAGCCCAGTCCTTCCTCCCCAATTCTTCCATCTTTCTCTTCCTTTACGCCCTCCGTTAAGTCCTCGTCTGCT
GGTCGGGGTAGAGTCGCTGGTTCGCCACCGATTCGATCTACTCCCGAGTCAGGCTCATCGAAGCAATCTGATTTGGAGCCGAAGAAACCTGTGTTTTTCTCGAAGGATAA
TGCGGCGAACTCGGCTGCAAGTACTCGACTTGGCGCGTTGGACAGGGGTGTGGGGGAGAGAAACTTGCCCGACAGTTTACTTTCTGTGTTATCCGGTGTTGGCCGAGGAA
AACCCATGAAGCAACCAGTCCCAGAAGATCAACCAAAGCAGGAGAATCGTCATCTGAGACCTAGACAAGAGTCGGGTGGTCGTGGGATTGGTGGGCCTGTAAGGGGCGTT
GGTGGGGGCCCGCGAATGAGCCGCGATGAAGGTGTGAGGAACACTGGTAGGATGGCAAGAGGTGGTCCTGATGGTGAAGATGGTGGTGGAGGTAGAGGAAGAGGCGGGTT
TCGGGGCAGAGGAGGCTTCCGAGGCAGAGGAGGGTTTAGAGGGAGAGGTAGGGGACCGTTCAGAACTGGGGAGAGAGGAGAGAGAGGAAGAGCTCAAGATATGGAGGATG
GATATGCAGCAGGGCTTTATTTAGGTGACAATGCAGATGGTGAGAAGCTAGCAAAGAGGATTGGAACAGAAAATATGAACCAACTGGTTGAAGGGTTTGAAGAGATGAGT
GGTAGAACGCTGCCTTCGCCACTGGAAGAAGAGTATTTAGATGGGATGCATACTAATTATATGATAGAGTGTGAGCCAGAGTACTTGATGGGGGACTTTGAAAATAACCC
GGATATTGATGAGAAGCCACCTATTCCTCTTCGGGATGTACTCGAGATGACGAAACCTTTCTTAATGGCGTATGAAAACATTCAAAGCCACGAAGAGTGGGAGGAAATCG
TGGAAGAAATCATGCAGCAGAGAGTTCCATTGCTAAAGGAGATAGTAGACTATTACAGTGGACCGGATAGAGTAACTGCAAAGCAACAGCAAGAGGAACTAGAAAGAGTT
GCAAAAACACTTCCACAAAGTGCGCCTAATTCCATAAAGCAGTTTACCAATCGTGCAGTTCTTTCTCTGCAGAGCAACCCAGGATGGGGATTTGACAGGAAATGCCAGTT
CATGGACAAGCTTGTGAGGGAGTTCTCCCAGCAATACAAG
Protein sequenceShow/hide protein sequence
MSRSIGRKVPGISFLPNATKLSFVPFSSSSSSGGHGRGRGRGGSPSHGGGGPFDFTSRVPGQEDSNASKQESVDSPGTSGLGHGRGKPSPSSPILPSFSSFTPSVKSSSA
GRGRVAGSPPIRSTPESGSSKQSDLEPKKPVFFSKDNAANSAASTRLGALDRGVGERNLPDSLLSVLSGVGRGKPMKQPVPEDQPKQENRHLRPRQESGGRGIGGPVRGV
GGGPRMSRDEGVRNTGRMARGGPDGEDGGGGRGRGGFRGRGGFRGRGGFRGRGRGPFRTGERGERGRAQDMEDGYAAGLYLGDNADGEKLAKRIGTENMNQLVEGFEEMS
GRTLPSPLEEEYLDGMHTNYMIECEPEYLMGDFENNPDIDEKPPIPLRDVLEMTKPFLMAYENIQSHEEWEEIVEEIMQQRVPLLKEIVDYYSGPDRVTAKQQQEELERV
AKTLPQSAPNSIKQFTNRAVLSLQSNPGWGFDRKCQFMDKLVREFSQQYK