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MS002652 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002652
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionserine-rich protein-related
Genome locationscaffold928:23121..23450
RNA-Seq ExpressionMS002652
SyntenyMS002652
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048240.1 putative PGPS/D10 protein [Cucumis melo var. makuwa]2.0e-2061.8Show/hide
Query:  MTFSEFSLEDLKRSPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSVGSHLSELARKSAEVVGPYSP
        M  +E +L DLK + H ++ SPS     S ATK  S AK NCLCSPTTHIGSFRCRHHRH+G+ RG SVGS+LS+LARK  E++GP+SP
Subjt:  MTFSEFSLEDLKRSPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSVGSHLSELARKSAEVVGPYSP

KAG6607735.1 hypothetical protein SDJN03_01077, partial [Cucurbita argyrosperma subsp. sororia]7.4e-2359.63Show/hide
Query:  MDHKPDRKAPRPNDRNQM--NGKMTFSEFSLEDLKRSPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHS-GLARGVSVGSHLSEL
        MDHKPD +APRP  R+ +  + K+ F++F LEDLKRSP ++VS    S  Q    K S  AKG+CLCSPTTHIGSFRCRHHR S G+ RG SVGS+LS+L
Subjt:  MDHKPDRKAPRPNDRNQM--NGKMTFSEFSLEDLKRSPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHS-GLARGVSVGSHLSEL

Query:  ARKSAEVVG
         RKS+E +G
Subjt:  ARKSAEVVG

KAG7024984.1 hypothetical protein SDJN02_13804, partial [Cucurbita argyrosperma subsp. argyrosperma]8.5e-2760.71Show/hide
Query:  MDHKPDRKAPRPNDRNQMN--GKMTFSEFSLEDLKRSPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSVGSHLSELA
        MDHKPD +APRP DRN  N   K  F++F LED K+  +L+ SSP    S+S+A K  S AK +CLCSPTTHIGSFRCRHHRH+G+ RG SVGS+LSELA
Subjt:  MDHKPDRKAPRPNDRNQMN--GKMTFSEFSLEDLKRSPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSVGSHLSELA

Query:  RKSAEVVGPYSP
         KS +++  YSP
Subjt:  RKSAEVVGPYSP

KGN44385.1 hypothetical protein Csa_015645 [Cucumis sativus]1.4e-2656.67Show/hide
Query:  MDHKPDRKAPRPNDRNQMNG----------KMTFSEFSLEDLKRSPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSV
        MD+K D +APRPNDRN  N           KM F++ +LEDLK++P ++V   S S   S+A +  S AK NCLCSPTTHIGSFRCRHHRHSG+ RG SV
Subjt:  MDHKPDRKAPRPNDRNQMNG----------KMTFSEFSLEDLKRSPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSV

Query:  GSHLSELARKSAEVVGPYSP
        GS+LS+L RK  E+VG +SP
Subjt:  GSHLSELARKSAEVVGPYSP

PON32972.1 hypothetical protein PanWU01x14_356530 [Parasponia andersonii]3.9e-1651.92Show/hide
Query:  MDHKPDRKAPRPNDRNQMNGKMTFSEFSLEDLKRSPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSVGSHLSELARK
        MD K  +++  P+ +   N K+   E +LE+LK+  H++V SP   Q+ ++ TK SS  + NCLCSPTTH GSFRCRHHR SG+ RG SVGS+LSELARK
Subjt:  MDHKPDRKAPRPNDRNQMNGKMTFSEFSLEDLKRSPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSVGSHLSELARK

Query:  SAEV
        S  +
Subjt:  SAEV

TrEMBL top hitse value%identityAlignment
A0A0A0K3W3 Uncharacterized protein7.0e-2756.67Show/hide
Query:  MDHKPDRKAPRPNDRNQMNG----------KMTFSEFSLEDLKRSPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSV
        MD+K D +APRPNDRN  N           KM F++ +LEDLK++P ++V   S S   S+A +  S AK NCLCSPTTHIGSFRCRHHRHSG+ RG SV
Subjt:  MDHKPDRKAPRPNDRNQMNG----------KMTFSEFSLEDLKRSPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSV

Query:  GSHLSELARKSAEVVGPYSP
        GS+LS+L RK  E+VG +SP
Subjt:  GSHLSELARKSAEVVGPYSP

A0A2N9HXD0 Uncharacterized protein1.7e-1752.88Show/hide
Query:  MDHKPDRKAPRPNDRNQMNGKMTFSEFSLEDLKRSPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSVGSHLSELARK
        MD   ++K P+ N   +MN K+  +EFSL+DLK S HL+VS  SQ+ S   + +       NCLCSPTTH+GSFRCRHHR+ G+ RG SVGSHLS LA K
Subjt:  MDHKPDRKAPRPNDRNQMNGKMTFSEFSLEDLKRSPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSVGSHLSELARK

Query:  SAEV
        S  +
Subjt:  SAEV

A0A2P5A8U7 Uncharacterized protein1.9e-1651.92Show/hide
Query:  MDHKPDRKAPRPNDRNQMNGKMTFSEFSLEDLKRSPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSVGSHLSELARK
        MD K  +++  P+ +   N K+   E +LE+LK+  H++V SP   Q+ ++ TK SS  + NCLCSPTTH GSFRCRHHR SG+ RG SVGS+LSELARK
Subjt:  MDHKPDRKAPRPNDRNQMNGKMTFSEFSLEDLKRSPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSVGSHLSELARK

Query:  SAEV
        S  +
Subjt:  SAEV

A0A2P5ELH4 Uncharacterized protein3.3e-1651.92Show/hide
Query:  MDHKPDRKAPRPNDRNQMNGKMTFSEFSLEDLKRSPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSVGSHLSELARK
        MD K  +++  P+     N K+   E +LE+LK+  H++V SP + Q+ ++ TK SS  + NCLCSPTTH GSFRCRHHR SG+ RG SVGS+LSELARK
Subjt:  MDHKPDRKAPRPNDRNQMNGKMTFSEFSLEDLKRSPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSVGSHLSELARK

Query:  SAEV
        S  +
Subjt:  SAEV

A0A5A7TYF3 Putative PGPS/D10 protein9.8e-2161.8Show/hide
Query:  MTFSEFSLEDLKRSPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSVGSHLSELARKSAEVVGPYSP
        M  +E +L DLK + H ++ SPS     S ATK  S AK NCLCSPTTHIGSFRCRHHRH+G+ RG SVGS+LS+LARK  E++GP+SP
Subjt:  MTFSEFSLEDLKRSPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSVGSHLSELARKSAEVVGPYSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein8.2e-0445.24Show/hide
Query:  TKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSVGSHL
        ++ +S  K  C+CSPTTH GSF+C+ HR   L R  SV +++
Subjt:  TKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSVGSHL

AT1G67910.1 unknown protein2.0e-0557.89Show/hide
Query:  TKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSV
        ++ +S  K NCLCSPTTH GSFRCR HR   L R  S+
Subjt:  TKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSV

AT1G67910.2 unknown protein2.0e-0557.89Show/hide
Query:  TKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSV
        ++ +S  K NCLCSPTTH GSFRCR HR   L R  S+
Subjt:  TKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSV

AT3G13227.1 serine-rich protein-related2.5e-0843.68Show/hide
Query:  KMTFSEFSLEDLKR------SPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHS---GLARGVSVGSHLSELA
        K T ++ S +D+KR      SP   V         S+    SS  + NCLC+PTTH GSFRCR+HR +   G++RG SV S+LS LA
Subjt:  KMTFSEFSLEDLKR------SPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHS---GLARGVSVGSHLSELA

AT5G55980.1 serine-rich protein-related9.4e-0850.72Show/hide
Query:  KRSPHLIVSSPSQ-SQSQSMATKGSSPAKG---NCLCSPTTHIGSFRCRHHRHSGLARGVSVGSHLSEL
        K S    V S SQ + S S+    SS  K    NCLCSPTTH GSFRCR+HR   L R  S+GS+L+ L
Subjt:  KRSPHLIVSSPSQ-SQSQSMATKGSSPAKG---NCLCSPTTHIGSFRCRHHRHSGLARGVSVGSHLSEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCATAAACCAGATCGCAAGGCCCCTAGACCTAACGACAGAAACCAAATGAACGGCAAAATGACATTCTCAGAGTTCAGTTTGGAGGATCTGAAACGAAGCCCTCA
CCTGATCGTGTCGTCCCCGTCGCAATCGCAATCGCAATCCATGGCGACGAAGGGCTCCTCTCCGGCGAAGGGCAACTGCCTCTGCTCCCCGACCACTCACATCGGATCCT
TCCGCTGCCGGCACCACAGGCACTCCGGCTTGGCCCGCGGCGTCTCCGTCGGCTCCCATCTCTCCGAGTTGGCCCGTAAATCCGCCGAAGTCGTCGGCCCCTACTCCCCT
mRNA sequenceShow/hide mRNA sequence
ATGGATCATAAACCAGATCGCAAGGCCCCTAGACCTAACGACAGAAACCAAATGAACGGCAAAATGACATTCTCAGAGTTCAGTTTGGAGGATCTGAAACGAAGCCCTCA
CCTGATCGTGTCGTCCCCGTCGCAATCGCAATCGCAATCCATGGCGACGAAGGGCTCCTCTCCGGCGAAGGGCAACTGCCTCTGCTCCCCGACCACTCACATCGGATCCT
TCCGCTGCCGGCACCACAGGCACTCCGGCTTGGCCCGCGGCGTCTCCGTCGGCTCCCATCTCTCCGAGTTGGCCCGTAAATCCGCCGAAGTCGTCGGCCCCTACTCCCCT
Protein sequenceShow/hide protein sequence
MDHKPDRKAPRPNDRNQMNGKMTFSEFSLEDLKRSPHLIVSSPSQSQSQSMATKGSSPAKGNCLCSPTTHIGSFRCRHHRHSGLARGVSVGSHLSELARKSAEVVGPYSP