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MS002664 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002664
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationscaffold928:124336..124527
RNA-Seq ExpressionMS002664
SyntenyMS002664
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030269.1 RPM1-interacting protein 4 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-2693.75Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPPVRF
        DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA+GR GADP+KAPPVR+
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPPVRF
KAG7037321.1 RPM1-interacting protein 4 [Cucurbita argyrosperma subsp. argyrosperma]6.4e-2793.75Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPPVRF
        DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA+GRPGA+P+KAPPVR+
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPPVRF
XP_022139562.1 RPM1-interacting protein 4 [Momordica charantia]4.9e-2795.31Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPPVRF
        DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPP ++
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPPVRF
XP_022941007.1 RPM1-interacting protein 4-like [Cucurbita moschata]1.2e-2590.62Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPPVRF
        DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA+GRPGA+P+KAPP ++
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPPVRF
XP_038897827.1 protein NOI4 [Benincasa hispida]2.1e-2590.62Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPPVRF
        DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GRP ADP+KAPP ++
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPPVRF
TrEMBL top hitse value%identityAlignment
A0A6J1CEA3 RPM1-interacting protein 42.4e-2795.31Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPPVRF
        DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPP ++
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPPVRF
A0A6J1FL74 RPM1-interacting protein 4-like5.9e-2690.62Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPPVRF
        DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA+GRPGA+P+KAPP ++
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPPVRF
A0A6J1ID15 uncharacterized protein LOC111474733 isoform X21.3e-2590.62Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPPVRF
        DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA+GR GADP+KAPP ++
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPPVRF
A0A6J1IGN4 uncharacterized protein LOC111474733 isoform X11.3e-2590.62Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPPVRF
        DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA+GR GADP+KAPP ++
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPPVRF
A0A6J1J2H2 RPM1-interacting protein 4-like5.9e-2690.62Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPPVRF
        DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA+GRPGA+P+KAPP ++
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPPVRF
SwissProt top hitse value%identityAlignment
O22633 Protein NOI41.0e-1974.63Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGR---PGADPSKAPPVRF
        DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + G     G DPSK  P ++
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGR---PGADPSKAPPVRF
Q8GYN5 RPM1-interacting protein 45.0e-0654.05Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTG
        +K   +PKFG+WD N+P+SA+G+T IFNK R+E+ +G
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTG
Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein9.0e-1991.11Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK
        DKGRPLPKFGEWDVNDP+SAEGFTVIFNKAR+EKK GGK DSPGK
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK
AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein2.5e-2177.27Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGR---PGADPSKAPPVR
        DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + G     G DPSK  PV+
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGR---PGADPSKAPPVR
AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein2.5e-2177.27Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGR---PGADPSKAPPVR
        DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + G     G DPSK  PV+
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGR---PGADPSKAPPVR
AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein7.3e-2174.63Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGR---PGADPSKAPPVRF
        DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + G     G DPSK  P ++
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGR---PGADPSKAPPVRF
AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein1.6e-1271.74Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKT----GGKPDS
        +KG+PLPKFGEWDVN+P SAEGFTVIF+KA DEKKT    G  P+S
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKT----GGKPDS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GACAAAGGTCGGCCATTGCCAAAATTTGGAGAGTGGGATGTTAATGATCCGACATCAGCTGAGGGATTCACTGTGATCTTTAACAAAGCTAGAGATGAAAAAAAAACAGG
TGGAAAACCCGATTCTCCTGGAAAAGTTGATGCGCGGGGCAGGCCGGGAGCAGATCCTTCCAAGGCACCGCCTGTAAGATTT
mRNA sequenceShow/hide mRNA sequence
GACAAAGGTCGGCCATTGCCAAAATTTGGAGAGTGGGATGTTAATGATCCGACATCAGCTGAGGGATTCACTGTGATCTTTAACAAAGCTAGAGATGAAAAAAAAACAGG
TGGAAAACCCGATTCTCCTGGAAAAGTTGATGCGCGGGGCAGGCCGGGAGCAGATCCTTCCAAGGCACCGCCTGTAAGATTT
Protein sequenceShow/hide protein sequence
DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDARGRPGADPSKAPPVRF