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MS002673 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002673
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNudix hydrolase domain-containing protein
Genome locationscaffold928:206549..206935
RNA-Seq ExpressionMS002673
SyntenyMS002673
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607747.1 hypothetical protein SDJN03_01089, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3165.44Show/hide
Query:  MSPAKFLIFVVVFHLKS---AADD--IPTPISCANCSICPYLCHPPPD--PSSPTYGVPPPPQQIAEPQPLPVPVAPANCPPTVVQCCQFSPP--PPGGY
        MSPAKFL  V+VFHLKS   AADD  +PTP SC NC++C   C PPPD  P  P    PPPP  IAEP+PLPVPV P NCPPT+VQCCQF PP  PP   
Subjt:  MSPAKFLIFVVVFHLKS---AADD--IPTPISCANCSICPYLCHPPPD--PSSPTYGVPPPPQQIAEPQPLPVPVAPANCPPTVVQCCQFSPP--PPGGY

Query:  NNNNIYTPL-SEGC-SFLKLGLVSVLAPVLALAAIF
        N NNIYTP  +E C SFLK GLVSVLAPV  +AAIF
Subjt:  NNNNIYTPL-SEGC-SFLKLGLVSVLAPVLALAAIF

KAG7037325.1 hypothetical protein SDJN02_00950, partial [Cucurbita argyrosperma subsp. argyrosperma]6.0e-3266.18Show/hide
Query:  MSPAKFLIFVVVFHLKS---AADD--IPTPISCANCSICPYLCHPPPD--PSSPTYGVPPPPQQIAEPQPLPVPVAPANCPPTVVQCCQFSPP--PPGGY
        MSPAKFL  V+VFHLKS   AADD  +PTP SC NC++C   C PPPD  P  P    PPPP  IAEP+PLPVPV PANCPPT+VQCCQF PP  PP   
Subjt:  MSPAKFLIFVVVFHLKS---AADD--IPTPISCANCSICPYLCHPPPD--PSSPTYGVPPPPQQIAEPQPLPVPVAPANCPPTVVQCCQFSPP--PPGGY

Query:  NNNNIYTPL-SEGC-SFLKLGLVSVLAPVLALAAIF
        N NNIYTP  +E C SFLK GLVSVLAPV  +AAIF
Subjt:  NNNNIYTPL-SEGC-SFLKLGLVSVLAPVLALAAIF

KGN44024.1 hypothetical protein Csa_011878 [Cucumis sativus]5.8e-2757.78Show/hide
Query:  MSPAKFLIFVVVFHLK---SAADD--IPTPISCANCSICPYLCHPPPDPSSPTYGVPPPPQQIAEPQPLPVPVAPANCPPTVVQCCQFSPPPP----GGY
        M PAK L  VVVF+L    SA DD  +PTPISC NC+IC   C PPP    P    PPPP   AEP+PLP PVAPANCPPT+VQCCQF PPPP       
Subjt:  MSPAKFLIFVVVFHLK---SAADD--IPTPISCANCSICPYLCHPPPDPSSPTYGVPPPPQQIAEPQPLPVPVAPANCPPTVVQCCQFSPPPP----GGY

Query:  NNNNIYTPL-SEGCSFLKLGLVSVLAPVLALAAIF
         N N+YTP+ +   SFL++GL S LAPV  L AIF
Subjt:  NNNNIYTPL-SEGCSFLKLGLVSVLAPVLALAAIF

XP_008463043.1 PREDICTED: sperm mitochondrial-associated cysteine-rich protein-like [Cucumis melo]5.5e-2556.2Show/hide
Query:  MSPAKFLIFVVVFHLK---SAADD--IPTPISCANCSICPYLCHPPPDPSSPTY-GVPPPPQQIAEPQPLPVPVAPANCPPTVVQCCQFSPPPP----GG
        M PAK L  VVVF+L    SA DD  + TPISC NC+IC   C PP     P     PPPP   AEP+PLP+PVAPANCPPT+VQCCQF PPPP      
Subjt:  MSPAKFLIFVVVFHLK---SAADD--IPTPISCANCSICPYLCHPPPDPSSPTY-GVPPPPQQIAEPQPLPVPVAPANCPPTVVQCCQFSPPPP----GG

Query:  YNNNNIYTPL--SEGCSFLKLGLVSVLAPVLALAAIF
          N NIYTP+      SFL++GL S LAPV  L AIF
Subjt:  YNNNNIYTPL--SEGCSFLKLGLVSVLAPVLALAAIF

XP_011659730.1 leucine-rich repeat extensin-like protein 3 [Cucumis sativus]5.8e-2757.78Show/hide
Query:  MSPAKFLIFVVVFHLK---SAADD--IPTPISCANCSICPYLCHPPPDPSSPTYGVPPPPQQIAEPQPLPVPVAPANCPPTVVQCCQFSPPPP----GGY
        M PAK L  VVVF+L    SA DD  +PTPISC NC+IC   C PPP    P    PPPP   AEP+PLP PVAPANCPPT+VQCCQF PPPP       
Subjt:  MSPAKFLIFVVVFHLK---SAADD--IPTPISCANCSICPYLCHPPPDPSSPTYGVPPPPQQIAEPQPLPVPVAPANCPPTVVQCCQFSPPPP----GGY

Query:  NNNNIYTPL-SEGCSFLKLGLVSVLAPVLALAAIF
         N N+YTP+ +   SFL++GL S LAPV  L AIF
Subjt:  NNNNIYTPL-SEGCSFLKLGLVSVLAPVLALAAIF

TrEMBL top hitse value%identityAlignment
A0A0A0K536 Uncharacterized protein2.8e-2757.78Show/hide
Query:  MSPAKFLIFVVVFHLK---SAADD--IPTPISCANCSICPYLCHPPPDPSSPTYGVPPPPQQIAEPQPLPVPVAPANCPPTVVQCCQFSPPPP----GGY
        M PAK L  VVVF+L    SA DD  +PTPISC NC+IC   C PPP    P    PPPP   AEP+PLP PVAPANCPPT+VQCCQF PPPP       
Subjt:  MSPAKFLIFVVVFHLK---SAADD--IPTPISCANCSICPYLCHPPPDPSSPTYGVPPPPQQIAEPQPLPVPVAPANCPPTVVQCCQFSPPPP----GGY

Query:  NNNNIYTPL-SEGCSFLKLGLVSVLAPVLALAAIF
         N N+YTP+ +   SFL++GL S LAPV  L AIF
Subjt:  NNNNIYTPL-SEGCSFLKLGLVSVLAPVLALAAIF

A0A1S3CI95 sperm mitochondrial-associated cysteine-rich protein-like2.6e-2556.2Show/hide
Query:  MSPAKFLIFVVVFHLK---SAADD--IPTPISCANCSICPYLCHPPPDPSSPTY-GVPPPPQQIAEPQPLPVPVAPANCPPTVVQCCQFSPPPP----GG
        M PAK L  VVVF+L    SA DD  + TPISC NC+IC   C PP     P     PPPP   AEP+PLP+PVAPANCPPT+VQCCQF PPPP      
Subjt:  MSPAKFLIFVVVFHLK---SAADD--IPTPISCANCSICPYLCHPPPDPSSPTY-GVPPPPQQIAEPQPLPVPVAPANCPPTVVQCCQFSPPPP----GG

Query:  YNNNNIYTPL--SEGCSFLKLGLVSVLAPVLALAAIF
          N NIYTP+      SFL++GL S LAPV  L AIF
Subjt:  YNNNNIYTPL--SEGCSFLKLGLVSVLAPVLALAAIF

A0A200QK50 Uncharacterized protein6.3e-1150.94Show/hide
Query:  KMSPAKFLIFVVVFHL-----------KSAADDIPTPISCANCSICPYLCHPPPDPSS-PTYGVPPPPQQIAEPQPLPVPVAPANCPPT-VVQCC-QFSP
        KMSPAK LIF+V   L           + + D I +P  C NCSICPY CH PP PS  P+YG PPPP Q A  Q         NCPPT VVQCC Q  P
Subjt:  KMSPAKFLIFVVVFHL-----------KSAADDIPTPISCANCSICPYLCHPPPDPSS-PTYGVPPPPQQIAEPQPLPVPVAPANCPPT-VVQCC-QFSP

Query:  PPPGGY
        P P GY
Subjt:  PPPGGY

A0A438JH97 Nitrile-specifier protein 52.4e-1041.53Show/hide
Query:  IRSKMSPAKFLIFVVVFHLKSA----------ADDIPTPISCANCSICPYLCH---PPPDPSSPTYGVPPPPQQIAEPQPLPVPVAPANCPPTVVQCCQF
        +RSKMS AK +  +V++ L S            D + TP  C NCSICPY CH   PPP P  P+ G PPP            P A  NCPPT   CCQ+
Subjt:  IRSKMSPAKFLIFVVVFHLKSA----------ADDIPTPISCANCSICPYLCH---PPPDPSSPTYGVPPPPQQIAEPQPLPVPVAPANCPPTVVQCCQF

Query:  ---SPPPPGGYNNNNIYT
           SPP P  Y   N Y+
Subjt:  ---SPPPPGGYNNNNIYT

F6HHQ3 Nudix hydrolase domain-containing protein2.4e-1041.53Show/hide
Query:  IRSKMSPAKFLIFVVVFHLKSA----------ADDIPTPISCANCSICPYLCH---PPPDPSSPTYGVPPPPQQIAEPQPLPVPVAPANCPPTVVQCCQF
        +RSKMS AK +  +V++ L S            D + TP  C NCSICPY CH   PPP P  P+ G PPP            P A  NCPPT   CCQ+
Subjt:  IRSKMSPAKFLIFVVVFHLKSA----------ADDIPTPISCANCSICPYLCH---PPPDPSSPTYGVPPPPQQIAEPQPLPVPVAPANCPPTVVQCCQF

Query:  ---SPPPPGGYNNNNIYT
           SPP P  Y   N Y+
Subjt:  ---SPPPPGGYNNNNIYT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTCGATCAAAAATGTCTCCGGCGAAGTTTCTGATTTTCGTCGTCGTCTTCCACCTCAAGTCCGCCGCCGACGACATACCCACGCCGATCTCCTGTGCGAACTGCTCCAT
TTGTCCGTACCTCTGCCACCCGCCGCCGGATCCTTCTTCTCCGACGTACGGGGTGCCGCCGCCGCCGCAGCAGATTGCAGAGCCGCAGCCACTTCCGGTGCCGGTGGCTC
CGGCGAACTGCCCTCCGACGGTGGTACAGTGCTGCCAGTTTTCTCCGCCGCCGCCGGGTGGTTACAACAACAACAACATATACACGCCGTTGAGCGAGGGCTGTTCATTT
TTGAAACTTGGATTGGTCTCTGTTTTGGCCCCTGTTCTTGCGTTGGCCGCCATTTTC
mRNA sequenceShow/hide mRNA sequence
ATTCGATCAAAAATGTCTCCGGCGAAGTTTCTGATTTTCGTCGTCGTCTTCCACCTCAAGTCCGCCGCCGACGACATACCCACGCCGATCTCCTGTGCGAACTGCTCCAT
TTGTCCGTACCTCTGCCACCCGCCGCCGGATCCTTCTTCTCCGACGTACGGGGTGCCGCCGCCGCCGCAGCAGATTGCAGAGCCGCAGCCACTTCCGGTGCCGGTGGCTC
CGGCGAACTGCCCTCCGACGGTGGTACAGTGCTGCCAGTTTTCTCCGCCGCCGCCGGGTGGTTACAACAACAACAACATATACACGCCGTTGAGCGAGGGCTGTTCATTT
TTGAAACTTGGATTGGTCTCTGTTTTGGCCCCTGTTCTTGCGTTGGCCGCCATTTTC
Protein sequenceShow/hide protein sequence
IRSKMSPAKFLIFVVVFHLKSAADDIPTPISCANCSICPYLCHPPPDPSSPTYGVPPPPQQIAEPQPLPVPVAPANCPPTVVQCCQFSPPPPGGYNNNNIYTPLSEGCSF
LKLGLVSVLAPVLALAAIF