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MS002680 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002680
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNa-translocating NADH-quinone reductase subunit A
Genome locationscaffold928:255333..255896
RNA-Seq ExpressionMS002680
SyntenyMS002680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK07949.1 uncharacterized protein E5676_scaffold265G00660 [Cucumis melo var. makuwa]5.7e-5390.83Show/hide
Query:  DTDGFVIPSLGIEETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
        +TDGFVIPSLGIEETDQT+VGSP+VEI EPPPK KEETTIYLGPHGAPPSQSKQDLN TNRKQRLK KLKEADRRTT GRENKLENLRELVG GKSSTNM
Subjt:  DTDGFVIPSLGIEETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM

Query:  AKGSSRDWLDPHCHEAQFEK
         KGSSRDWLDPHCHEA+FEK
Subjt:  AKGSSRDWLDPHCHEAQFEK
XP_004150791.2 uncharacterized protein LOC101216518 [Cucumis sativus]1.2e-5594.17Show/hide
Query:  DTDGFVIPSLGIEETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
        DTDGFVIPSLGIEE DQT+VGSP+VEI EPPPK KEETTIYLGPHGAPPSQSKQDLN TNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
Subjt:  DTDGFVIPSLGIEETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM

Query:  AKGSSRDWLDPHCHEAQFEK
        AKGSSRDWLDPHCHEA+FEK
Subjt:  AKGSSRDWLDPHCHEAQFEK
XP_008462996.1 PREDICTED: uncharacterized protein LOC103501243 [Cucumis melo]1.5e-5391.67Show/hide
Query:  DTDGFVIPSLGIEETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
        DTDGFVIPSLGIEETDQT+VGSP+VEI EPPPK KEETTIYLGPHGAPPSQSKQDLN TNRKQRLK KLKEADRRTT GRENKLENLRELVG GKSSTNM
Subjt:  DTDGFVIPSLGIEETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM

Query:  AKGSSRDWLDPHCHEAQFEK
         KGSSRDWLDPHCHEA+FEK
Subjt:  AKGSSRDWLDPHCHEAQFEK
XP_022139462.1 uncharacterized protein LOC111010385 [Momordica charantia]1.1e-59100Show/hide
Query:  DTDGFVIPSLGIEETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
        DTDGFVIPSLGIEETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
Subjt:  DTDGFVIPSLGIEETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM

Query:  AKGSSRDWLDPHCHEAQFEK
        AKGSSRDWLDPHCHEAQFEK
Subjt:  AKGSSRDWLDPHCHEAQFEK
XP_038898121.1 uncharacterized protein LOC120085905 [Benincasa hispida]5.6e-5695Show/hide
Query:  DTDGFVIPSLGIEETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
        DTDGFVIPSLGIEET+QTK GSP+VEI EPPPK KEETTIYLGPHGAPPSQSKQDLN TNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
Subjt:  DTDGFVIPSLGIEETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM

Query:  AKGSSRDWLDPHCHEAQFEK
        AKGSSRDWLDPHCHEAQFEK
Subjt:  AKGSSRDWLDPHCHEAQFEK
TrEMBL top hitse value%identityAlignment
A0A0A0K8B7 Uncharacterized protein6.0e-5694.17Show/hide
Query:  DTDGFVIPSLGIEETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
        DTDGFVIPSLGIEE DQT+VGSP+VEI EPPPK KEETTIYLGPHGAPPSQSKQDLN TNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
Subjt:  DTDGFVIPSLGIEETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM

Query:  AKGSSRDWLDPHCHEAQFEK
        AKGSSRDWLDPHCHEA+FEK
Subjt:  AKGSSRDWLDPHCHEAQFEK
A0A1S3CJS1 uncharacterized protein LOC1035012437.3e-5491.67Show/hide
Query:  DTDGFVIPSLGIEETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
        DTDGFVIPSLGIEETDQT+VGSP+VEI EPPPK KEETTIYLGPHGAPPSQSKQDLN TNRKQRLK KLKEADRRTT GRENKLENLRELVG GKSSTNM
Subjt:  DTDGFVIPSLGIEETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM

Query:  AKGSSRDWLDPHCHEAQFEK
         KGSSRDWLDPHCHEA+FEK
Subjt:  AKGSSRDWLDPHCHEAQFEK
A0A5D3CCA9 Uncharacterized protein2.8e-5390.83Show/hide
Query:  DTDGFVIPSLGIEETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
        +TDGFVIPSLGIEETDQT+VGSP+VEI EPPPK KEETTIYLGPHGAPPSQSKQDLN TNRKQRLK KLKEADRRTT GRENKLENLRELVG GKSSTNM
Subjt:  DTDGFVIPSLGIEETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM

Query:  AKGSSRDWLDPHCHEAQFEK
         KGSSRDWLDPHCHEA+FEK
Subjt:  AKGSSRDWLDPHCHEAQFEK
A0A6J1CE06 uncharacterized protein LOC1110103855.2e-60100Show/hide
Query:  DTDGFVIPSLGIEETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
        DTDGFVIPSLGIEETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM
Subjt:  DTDGFVIPSLGIEETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNM

Query:  AKGSSRDWLDPHCHEAQFEK
        AKGSSRDWLDPHCHEAQFEK
Subjt:  AKGSSRDWLDPHCHEAQFEK
A0A6J1F787 uncharacterized protein LOC1114427436.2e-5390.98Show/hide
Query:  DTDGFVIPSLGI--EETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSST
        DTDGFVIPSLGI  EETDQTKV SPEVEI +PPPK KEE TIYLGPHGAPPSQSKQDLN  NRK RLKQKLKEADRRTTTGRENKLENLRELVGGGKSST
Subjt:  DTDGFVIPSLGI--EETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSST

Query:  NMAKGSSRDWLDPHCHEAQFEK
        NM KGSSRDWLDPHCHEAQFEK
Subjt:  NMAKGSSRDWLDPHCHEAQFEK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G55640.1 unknown protein5.4e-3362.7Show/hide
Query:  DTDGFVIPSLGIEETDQTKVGSPEVEIYEP-PPKAKEETTIYLGPHGAPPSQSKQ-DLNLTNRKQRLKQKLKEADRRTT-TGRENKLENLRELVGGG---
        DTDGFVIPSL IEE         EVE  +P  PK+K E  IYLGPHGAPPSQ +    N ++RKQR KQ LKEAD++ + +GRENK+ NLRELVGGG   
Subjt:  DTDGFVIPSLGIEETDQTKVGSPEVEIYEP-PPKAKEETTIYLGPHGAPPSQSKQ-DLNLTNRKQRLKQKLKEADRRTT-TGRENKLENLRELVGGG---

Query:  KSSTNMAKGSSRDWLDPHCHEAQFEK
        +  TNM KG SRDWLDPHCHE+QFEK
Subjt:  KSSTNMAKGSSRDWLDPHCHEAQFEK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GACACTGATGGGTTCGTGATTCCCAGCTTGGGAATAGAAGAGACAGATCAAACTAAAGTTGGCTCTCCAGAAGTAGAAATTTATGAACCTCCTCCAAAGGCTAAGGAAGA
GACGACGATCTATCTTGGCCCACATGGTGCGCCACCATCACAGTCGAAACAAGATTTGAATCTCACCAATCGTAAGCAGCGGTTAAAGCAAAAACTGAAGGAAGCAGATC
GTAGGACCACAACGGGCCGGGAGAATAAGTTGGAGAATTTGAGAGAGCTTGTAGGTGGTGGAAAATCGAGCACCAACATGGCAAAAGGATCTTCGAGGGACTGGCTTGAC
CCACATTGCCATGAGGCTCAGTTTGAGAAG
mRNA sequenceShow/hide mRNA sequence
GACACTGATGGGTTCGTGATTCCCAGCTTGGGAATAGAAGAGACAGATCAAACTAAAGTTGGCTCTCCAGAAGTAGAAATTTATGAACCTCCTCCAAAGGCTAAGGAAGA
GACGACGATCTATCTTGGCCCACATGGTGCGCCACCATCACAGTCGAAACAAGATTTGAATCTCACCAATCGTAAGCAGCGGTTAAAGCAAAAACTGAAGGAAGCAGATC
GTAGGACCACAACGGGCCGGGAGAATAAGTTGGAGAATTTGAGAGAGCTTGTAGGTGGTGGAAAATCGAGCACCAACATGGCAAAAGGATCTTCGAGGGACTGGCTTGAC
CCACATTGCCATGAGGCTCAGTTTGAGAAG
Protein sequenceShow/hide protein sequence
DTDGFVIPSLGIEETDQTKVGSPEVEIYEPPPKAKEETTIYLGPHGAPPSQSKQDLNLTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGGGKSSTNMAKGSSRDWLD
PHCHEAQFEK