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MS002689 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002689
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDNA-dependent metalloprotease WSS1 isoform X2
Genome locationscaffold928:312980..313168
RNA-Seq ExpressionMS002689
SyntenyMS002689
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008237 - metallopeptidase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK07928.1 DNA damage response protein WSS1 [Cucumis melo var. makuwa]4.9e-2785.71Show/hide
Query:  PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
        PLAP+CELC+SQKPKD+DT+Y+ WSCKFCTLENSVKLEKC+AC QWRYSHGQPVSTR PNLGT
Subjt:  PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
XP_004150300.2 uncharacterized protein LOC101209563 [Cucumis sativus]3.7e-2785.71Show/hide
Query:  PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
        PLAP+CELC+SQKP D+DT+Y+ WSCKFCTLENSVKLEKC+ACDQWRYSHGQPVSTR PNLGT
Subjt:  PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
XP_022139765.1 uncharacterized protein LOC111010596 isoform X1 [Momordica charantia]5.5e-31100Show/hide
Query:  PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
        PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
Subjt:  PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
XP_022139768.1 DNA-dependent metalloprotease WSS1 isoform X2 [Momordica charantia]5.5e-31100Show/hide
Query:  PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
        PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
Subjt:  PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
XP_038898345.1 uncharacterized protein LOC120086023 [Benincasa hispida]9.8e-2888.89Show/hide
Query:  PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
        PLAP+CELC+SQKPKDADT+Y+ WSCKFCTLENSVKLEKCSACDQWRYSHGQPVST  PNLGT
Subjt:  PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
TrEMBL top hitse value%identityAlignment
A0A0A0K3J6 Uncharacterized protein1.8e-2785.71Show/hide
Query:  PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
        PLAP+CELC+SQKP D+DT+Y+ WSCKFCTLENSVKLEKC+ACDQWRYSHGQPVSTR PNLGT
Subjt:  PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
A0A1S4E403 uncharacterized protein LOC1035012342.3e-2785.71Show/hide
Query:  PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
        PLAP+CELC+SQKPKD+DT+Y+ WSCKFCTLENSVKLEKC+AC QWRYSHGQPVSTR PNLGT
Subjt:  PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
A0A5D3C9S9 DNA damage response protein WSS12.3e-2785.71Show/hide
Query:  PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
        PLAP+CELC+SQKPKD+DT+Y+ WSCKFCTLENSVKLEKC+AC QWRYSHGQPVSTR PNLGT
Subjt:  PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
A0A6J1CDP8 uncharacterized protein LOC111010596 isoform X12.7e-31100Show/hide
Query:  PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
        PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
Subjt:  PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
A0A6J1CGH2 DNA-dependent metalloprotease WSS1 isoform X22.7e-31100Show/hide
Query:  PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
        PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
Subjt:  PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55915.1 zinc ion binding1.2e-2369.35Show/hide
Query:  LAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT
        LAP+CELC + KPK+ + K+++WSCKFCTLEN VKLEKC AC QWRYS+G P+ST APN+GT
Subjt:  LAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCACTAGCTCCACTATGTGAGCTTTGTTACTCACAAAAGCCAAAAGATGCTGATACCAAGTACGAACTCTGGTCATGTAAATTCTGCACCTTAGAAAACAGTGTGAAGTT
GGAGAAATGCTCAGCATGTGATCAATGGAGATATTCTCATGGCCAGCCAGTGTCAACTCGAGCACCGAATCTTGGCACC
mRNA sequenceShow/hide mRNA sequence
CCACTAGCTCCACTATGTGAGCTTTGTTACTCACAAAAGCCAAAAGATGCTGATACCAAGTACGAACTCTGGTCATGTAAATTCTGCACCTTAGAAAACAGTGTGAAGTT
GGAGAAATGCTCAGCATGTGATCAATGGAGATATTCTCATGGCCAGCCAGTGTCAACTCGAGCACCGAATCTTGGCACC
Protein sequenceShow/hide protein sequence
PLAPLCELCYSQKPKDADTKYELWSCKFCTLENSVKLEKCSACDQWRYSHGQPVSTRAPNLGT