; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002717 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002717
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF1218)
Genome locationscaffold66:6250..8137
RNA-Seq ExpressionMS002717
SyntenyMS002717
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009606 - Modifying wall lignin-1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008452269.1 PREDICTED: uncharacterized protein 2C05 isoform X1 [Cucumis melo]1.9e-8789.67Show/hide
Query:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV
        MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIV+DT AK NYCVYDSDISTGLGVG FLFL+ASQILIMVASRCFCCG+PLSPGGSRA A++LFI CWV
Subjt:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV

Query:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK
        FF IAEICLLAGS RNAYHTKYRT+ T+TP SCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSY+KD G+GMSTYK
Subjt:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK

XP_022142726.1 uncharacterized protein LOC111012773 [Momordica charantia]1.6e-9497.83Show/hide
Query:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV
        MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAK NYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALA+ILFI CWV
Subjt:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV

Query:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK
        FFFIAEICLLAGSVRNAYHTKYRTMFTETP SCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK
Subjt:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK

XP_022943151.1 uncharacterized protein LOC111447968 [Cucurbita moschata]1.9e-8789.13Show/hide
Query:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV
        MASKLLLFTVF+FD+IAFGLAIAAEQRRSIAKIV+DTDAK+NYCVYDSDISTGLGVG FLFLMASQILIM+ASRCFCCG+PLSPGGSRA A++LFI CWV
Subjt:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV

Query:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK
        FF IAEICLLAGS RNAYHTKYRT+ T+TP SCQMLRRGVFAAGAAF FFTSIVSQFYYVCYSRARE+FQSYNKDA IGMSTYK
Subjt:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK

XP_023002999.1 uncharacterized protein LOC111496714 [Cucurbita maxima]3.2e-8789.13Show/hide
Query:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV
        MASKLLLFTVF+FD+IAFGLAIAAEQRRSIAKIV+DTDAK NYCVYDSDISTGLGVG FLFLMASQILIM+ASRCFCCG+PLSPGGSRA A++LFI CWV
Subjt:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV

Query:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK
        FF IAEICLLAGS RNAYHTKYRT+ T+TP SCQMLRRGVFAAGAAF FFTSIVSQFYYVCYSRARE+FQSYNKDA IGMSTYK
Subjt:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK

XP_038903364.1 uncharacterized protein LOC120089980 [Benincasa hispida]5.3e-9092.39Show/hide
Query:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV
        MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIV+DTDAK NYCVYDSDISTGLGVG FLFLMASQILIMVASRCFCCG+PLSPGGSRA A++LFI CWV
Subjt:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV

Query:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK
        FFFIAEICLLAGS RNAYHTKYRT+ T+TP SCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKD GIGMSTYK
Subjt:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK

TrEMBL top hitse value%identityAlignment
A0A1S3BTF0 uncharacterized protein 2C05 isoform X19.1e-8889.67Show/hide
Query:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV
        MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIV+DT AK NYCVYDSDISTGLGVG FLFL+ASQILIMVASRCFCCG+PLSPGGSRA A++LFI CWV
Subjt:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV

Query:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK
        FF IAEICLLAGS RNAYHTKYRT+ T+TP SCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSY+KD G+GMSTYK
Subjt:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK

A0A5D3DJF4 Uncharacterized protein9.1e-8889.67Show/hide
Query:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV
        MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIV+DT AK NYCVYDSDISTGLGVG FLFL+ASQILIMVASRCFCCG+PLSPGGSRA A++LFI CWV
Subjt:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV

Query:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK
        FF IAEICLLAGS RNAYHTKYRT+ T+TP SCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSY+KD G+GMSTYK
Subjt:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK

A0A6J1CN21 uncharacterized protein LOC1110127737.7e-9597.83Show/hide
Query:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV
        MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAK NYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALA+ILFI CWV
Subjt:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV

Query:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK
        FFFIAEICLLAGSVRNAYHTKYRTMFTETP SCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK
Subjt:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK

A0A6J1FQX8 uncharacterized protein LOC1114479689.1e-8889.13Show/hide
Query:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV
        MASKLLLFTVF+FD+IAFGLAIAAEQRRSIAKIV+DTDAK+NYCVYDSDISTGLGVG FLFLMASQILIM+ASRCFCCG+PLSPGGSRA A++LFI CWV
Subjt:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV

Query:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK
        FF IAEICLLAGS RNAYHTKYRT+ T+TP SCQMLRRGVFAAGAAF FFTSIVSQFYYVCYSRARE+FQSYNKDA IGMSTYK
Subjt:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK

A0A6J1KS26 uncharacterized protein LOC1114967141.6e-8789.13Show/hide
Query:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV
        MASKLLLFTVF+FD+IAFGLAIAAEQRRSIAKIV+DTDAK NYCVYDSDISTGLGVG FLFLMASQILIM+ASRCFCCG+PLSPGGSRA A++LFI CWV
Subjt:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV

Query:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK
        FF IAEICLLAGS RNAYHTKYRT+ T+TP SCQMLRRGVFAAGAAF FFTSIVSQFYYVCYSRARE+FQSYNKDA IGMSTYK
Subjt:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13380.1 Protein of unknown function (DUF1218)7.5e-4245.41Show/hide
Query:  ASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWVF
        AS L+   V    ++AFG +IAAE+RRSI K +QD    + +CVYDSD++TG GVG FLFL++S+ L+M  ++C C GRPL+PG  RA +II FI  W+ 
Subjt:  ASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWVF

Query:  FFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARES---FQSYNKDAGIGMSTY
        F +AE C++AG+ +NAYHTKY +  T    SC  LR+G+F AGA FI  T +++ +YY+ ++++  S    ++    + IGM+ Y
Subjt:  FFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARES---FQSYNKDAGIGMSTY

AT1G52910.1 Protein of unknown function (DUF1218)3.6e-6063.37Show/hide
Query:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV
        MASKL++  VF+ D+IA GLAIAAEQRRS+ K+V D + +  +C Y SDI+T  G G F+ L  SQ++IMVASRCFCCG+ L PGGSRA  I+LF+ICWV
Subjt:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV

Query:  FFFIAEICLLAGSVRNAYHTKYRTMFT-ETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQS
        FF IAE+CLLAGS+RNAYHT YR M+  E P SC+++R+GVFAAGA+F  FT+IVSQFYY+ YSRAR+ +Q+
Subjt:  FFFIAEICLLAGSVRNAYHTKYRTMFT-ETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQS

AT1G61065.1 Protein of unknown function (DUF1218)6.7e-5966.48Show/hide
Query:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV
        MAS LLL  VFVFD+IAFGLA+AAEQRR+  +I +++   S YCVYD DI+TGLGVG FL L+ASQ+LIMVASRC CCGR L+P GSR+ AI LFI  WV
Subjt:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV

Query:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMST
        FFFIA++CLLAGSVRNAYHTKYR  F  T  SC+ LR+GVF AGAAFI  T IVS+ YYV  SRA++ FQ  ++D GI MS+
Subjt:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMST

AT3G15480.1 Protein of unknown function (DUF1218)1.0e-6266.28Show/hide
Query:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV
        MASKL++  VF+ D+IA GLAIAAEQRRS+ K+  D D + +YCVY +DI+T  G G F+ L  SQ+LIM ASRCFCCG+ L+PGGSRA AIILF+ICWV
Subjt:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV

Query:  FFFIAEICLLAGSVRNAYHTKYRTMF-TETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQS
        FF IAE+CLLA S+RNAYHT+YR M+  E P SC+++R+GVFAAGAAF  FT+IVSQFYYVCYSRAR+++Q+
Subjt:  FFFIAEICLLAGSVRNAYHTKYRTMF-TETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQS

AT4G27435.1 Protein of unknown function (DUF1218)9.7e-6671.43Show/hide
Query:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV
        MASK++   VFVF++IAFGLA+AAEQRRS A++VQDT+ + NYCVYDSD +TG GVG FLF +ASQILIM+ SRCFCCG+PL PGGSRALA+ILFI+ W+
Subjt:  MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWV

Query:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARES
        FF IAEICLLAGSV NAYHTKYRTMF + P  CQ LR+GVFAAGA+F+FF +IVSQFYY  Y  A E+
Subjt:  FFFIAEICLLAGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCGAAGCTACTTCTTTTCACAGTCTTTGTCTTTGATGTCATTGCCTTTGGCTTGGCCATTGCCGCTGAGCAAAGGAGAAGCATTGCAAAGATAGTTCAAGACAC
AGATGCCAAGAGCAATTATTGTGTATATGACTCTGACATTTCAACTGGATTGGGAGTTGGAGGATTTCTCTTCCTGATGGCCAGCCAGATCCTCATAATGGTCGCTAGCC
GCTGCTTCTGCTGCGGAAGGCCTCTGAGCCCCGGTGGTTCGAGGGCTTTGGCCATCATTCTTTTCATAATCTGCTGGGTGTTCTTCTTCATCGCTGAGATATGCCTGCTG
GCGGGATCAGTGAGAAATGCATACCACACCAAGTACAGAACAATGTTTACTGAAACTCCTACCTCTTGTCAAATGTTGAGAAGGGGAGTGTTTGCTGCAGGGGCAGCTTT
CATTTTCTTCACTTCCATTGTCTCTCAGTTTTACTACGTGTGCTACTCGAGGGCCCGAGAGAGCTTCCAATCGTATAACAAAGACGCTGGTATTGGCATGAGTACCTACA
AA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCGAAGCTACTTCTTTTCACAGTCTTTGTCTTTGATGTCATTGCCTTTGGCTTGGCCATTGCCGCTGAGCAAAGGAGAAGCATTGCAAAGATAGTTCAAGACAC
AGATGCCAAGAGCAATTATTGTGTATATGACTCTGACATTTCAACTGGATTGGGAGTTGGAGGATTTCTCTTCCTGATGGCCAGCCAGATCCTCATAATGGTCGCTAGCC
GCTGCTTCTGCTGCGGAAGGCCTCTGAGCCCCGGTGGTTCGAGGGCTTTGGCCATCATTCTTTTCATAATCTGCTGGGTGTTCTTCTTCATCGCTGAGATATGCCTGCTG
GCGGGATCAGTGAGAAATGCATACCACACCAAGTACAGAACAATGTTTACTGAAACTCCTACCTCTTGTCAAATGTTGAGAAGGGGAGTGTTTGCTGCAGGGGCAGCTTT
CATTTTCTTCACTTCCATTGTCTCTCAGTTTTACTACGTGTGCTACTCGAGGGCCCGAGAGAGCTTCCAATCGTATAACAAAGACGCTGGTATTGGCATGAGTACCTACA
AA
Protein sequenceShow/hide protein sequence
MASKLLLFTVFVFDVIAFGLAIAAEQRRSIAKIVQDTDAKSNYCVYDSDISTGLGVGGFLFLMASQILIMVASRCFCCGRPLSPGGSRALAIILFIICWVFFFIAEICLL
AGSVRNAYHTKYRTMFTETPTSCQMLRRGVFAAGAAFIFFTSIVSQFYYVCYSRARESFQSYNKDAGIGMSTYK