CuGenDBv2

Gene ID	MS002732
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Transmembrane protein
Genome location	scaffold66:71001..71432
RNA-Seq Expression	MS002732
Synteny	MS002732
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008456033.1 PREDICTED: uncharacterized protein LOC103496084 [Cucumis melo]

1.3e-72

95.14

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Query:  MGSSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMA
        M SSGF LICMLHSLIALTCGALMMFYSHEV+VFGHG ETAIKLQGSSPHDQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDREFQ+FFAKGCVLLHLAMA
Subjt:  MGSSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD
        IWRVYFERKLEDLARDWPRQVVGD+TLALSWVFFLVYSWREKYD
Subjt:  IWRVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD

XP_022142937.1 uncharacterized protein LOC111012927 [Momordica charantia]

9.9e-76

100

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Query:  MGSSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMA
        MGSSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMA
Subjt:  MGSSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD
        IWRVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD
Subjt:  IWRVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD

XP_022984157.1 uncharacterized protein LOC111482570 isoform X2 [Cucurbita maxima]

1.1e-71

95.07

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Query:  SSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMAIW
        S GFLLICMLHSLIALTCGALMMFYSHEV+VFGHG ETAIKLQGSSPHDQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDREFQ+FFAKGCVLLHLAMAIW
Subjt:  SSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMAIW

Query:  RVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD
        RVYFERKLEDLA+DWPRQVVGD+TLALSWVFFLVYSWREKYD
Subjt:  RVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD

XP_023552104.1 uncharacterized protein LOC111809873 isoform X1 [Cucurbita pepo subsp. pepo]

1.1e-71

95.07

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Query:  SSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMAIW
        S GF+LICMLHSLIALTCGALMMFYSHEVFVFGHG ETAIKLQGSSPHDQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDREFQ+FFAKGCVLLHLAMAIW
Subjt:  SSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMAIW

Query:  RVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD
        RVYFERKLEDLA+DWPRQVVGD+TLALSWVFFLVYSWREKYD
Subjt:  RVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD

XP_038875201.1 uncharacterized protein LOC120067716 [Benincasa hispida]

3.0e-72

95.14

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Query:  MGSSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMA
        M SSGFLLICMLHSLIALTCGALMMFYSHEV+VFGHG ETAIKLQGSSPHDQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDREFQ+FFAKGCVLLHLAMA
Subjt:  MGSSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD
        IWRVYFERKLEDLA DWPRQVVGD+TLALSWVFFLVYSWREKYD
Subjt:  IWRVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C293 uncharacterized protein LOC103496084

6.5e-73

95.14

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Query:  MGSSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMA
        M SSGF LICMLHSLIALTCGALMMFYSHEV+VFGHG ETAIKLQGSSPHDQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDREFQ+FFAKGCVLLHLAMA
Subjt:  MGSSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD
        IWRVYFERKLEDLARDWPRQVVGD+TLALSWVFFLVYSWREKYD
Subjt:  IWRVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD

A0A6J1CPH9 uncharacterized protein LOC111012927

4.8e-76

100

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Query:  MGSSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMA
        MGSSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMA
Subjt:  MGSSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD
        IWRVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD
Subjt:  IWRVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD

A0A6J1E545 uncharacterized protein LOC111430823 isoform X2

4.6e-71

94.37

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Query:  SSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMAIW
        S GFLLICMLHSLIALTCGALMMFYSHEV+VFGHG ETAIKLQGSS HDQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDREFQ+FFAKGCVLLHLAMAIW
Subjt:  SSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMAIW

Query:  RVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD
        RVYFERKLEDLA+DWPRQVVGD+TLALSWVFFLVYSWREKYD
Subjt:  RVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD

A0A6J1FMS5 uncharacterized protein LOC111446881

2.1e-71

93.06

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Query:  MGSSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMA
        M SSGFLLICMLHSLIALTCGALMMFYSHEV+VFGHG ETAIKLQGSSP DQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDR+FQ+FFAKGCVLLHLAMA
Subjt:  MGSSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD
        IWRVYFERKLEDLA+DWPRQVVGD+TLALSWVFFL+YSWREKYD
Subjt:  IWRVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD

A0A6J1J9R2 uncharacterized protein LOC111482570 isoform X2

5.5e-72

95.07

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Query:  SSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMAIW
        S GFLLICMLHSLIALTCGALMMFYSHEV+VFGHG ETAIKLQGSSPHDQLLI+TSDSFSGLLLFTVGFLLFMVAFVKDREFQ+FFAKGCVLLHLAMAIW
Subjt:  SSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMAIW

Query:  RVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD
        RVYFERKLEDLA+DWPRQVVGD+TLALSWVFFLVYSWREKYD
Subjt:  RVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G53035.1 unknown protein

1.3e-52

66.67

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Query:  MGSSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMA
        M  S F +IC+LHS+IALT G LMMFY+ +  +FG GSE A KL+GS+PHD+LLIQ S SFSGLLLF +G +LFMV+FVKD+EF +FFA G V+L++ MA
Subjt:  MGSSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD
        +WRV FE K+EDLA +WP+Q +GDI LA+SWVFFLVYSWREKYD
Subjt:  IWRVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD

AT3G15358.1 unknown protein

3.1e-51

65.28

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Query:  MGSSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMA
        M S  F +IC+LHS+IALT G LMMFY+ +  +FGHGS+ A KL+GS+PHD+ LIQ S SFSGLLLF +G +LFMV+FVKDREF +FFA G V+L++ MA
Subjt:  MGSSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD
        +WRV FE K+EDLA + P+Q +GDI LA+SWVFFLVY+WREKYD
Subjt:  IWRVYFERKLEDLARDWPRQVVGDITLALSWVFFLVYSWREKYD

Sequences

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CDS sequence

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ATGGGATCATCTGGGTTTTTGTTGATCTGTATGCTTCATTCTCTGATTGCTCTAACTTGTGGGGCCTTGATGATGTTTTACTCCCACGAGGTGTTTGTGTTTGGCCATGG
CTCTGAGACTGCTATTAAGTTGCAGGGATCTAGCCCCCATGATCAGCTTCTGATACAAACATCTGATTCCTTCTCTGGTTTGCTTCTCTTTACTGTTGGATTCCTTTTGT
TCATGGTGGCTTTTGTCAAAGACAGAGAGTTCCAAACCTTTTTTGCCAAAGGGTGCGTGTTGCTTCACCTAGCCATGGCCATATGGAGAGTTTACTTTGAAAGGAAGCTC
GAGGATCTCGCTCGAGATTGGCCTCGGCAGGTCGTCGGGGATATCACATTGGCATTGTCATGGGTTTTCTTTCTTGTGTATTCATGGAGAGAAAAGTATGAT

mRNA sequence

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Protein sequence

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MGSSGFLLICMLHSLIALTCGALMMFYSHEVFVFGHGSETAIKLQGSSPHDQLLIQTSDSFSGLLLFTVGFLLFMVAFVKDREFQTFFAKGCVLLHLAMAIWRVYFERKL
EDLARDWPRQVVGDITLALSWVFFLVYSWREKYD

MS002732 (gene) of Bitter gourd (TR) v1 genome