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MS002736 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002736
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRegulator of rDNA transcription protein 15
Genome locationscaffold66:102494..102586
RNA-Seq ExpressionMS002736
SyntenyMS002736
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC10889.1 hypothetical protein L484_002553 [Morus notabilis]1.3e-0486.21Show/hide
Query:  VLGMDNDPSAGSPTETLLRYLLPLNDNVQ
        V+G DNDPSAGSPTETLLR LLPLND VQ
Subjt:  VLGMDNDPSAGSPTETLLRYLLPLNDNVQ
PHT25323.1 hypothetical protein CQW23_35043 [Capsicum baccatum]2.2e-0489.29Show/hide
Query:  LGMDNDPSAGSPTETLLRYLLPLNDNVQ
        LG DNDPSAGSPTETLLR LLPLND VQ
Subjt:  LGMDNDPSAGSPTETLLRYLLPLNDNVQ
PHT25435.1 hypothetical protein CQW23_34937 [Capsicum baccatum]2.2e-0480.65Show/hide
Query:  FDVLGMDNDPSAGSPTETLLRYLLPLNDNVQ
        F  +G DNDPSAGSPTETLLR LLPLND VQ
Subjt:  FDVLGMDNDPSAGSPTETLLRYLLPLNDNVQ
PHT44506.1 hypothetical protein CQW23_13664 [Capsicum baccatum]7.5e-0583.87Show/hide
Query:  FDVLGMDNDPSAGSPTETLLRYLLPLNDNVQ
        F   G DNDPSAGSPTETLLR LLPLNDNVQ
Subjt:  FDVLGMDNDPSAGSPTETLLRYLLPLNDNVQ
PHT44511.1 Regulator of rDNA transcription protein 15 [Capsicum baccatum]7.5e-0583.87Show/hide
Query:  FDVLGMDNDPSAGSPTETLLRYLLPLNDNVQ
        F   G DNDPSAGSPTETLLR LLPLNDNVQ
Subjt:  FDVLGMDNDPSAGSPTETLLRYLLPLNDNVQ
TrEMBL top hitse value%identityAlignment
A0A0A0L1K6 Uncharacterized protein5.6e-0683.87Show/hide
Query:  FDVLGMDNDPSAGSPTETLLRYLLPLNDNVQ
        FD+LG+DNDP AGSPTETLLR LLPLND VQ
Subjt:  FDVLGMDNDPSAGSPTETLLRYLLPLNDNVQ
A0A2G2UX93 Uncharacterized protein1.1e-0489.29Show/hide
Query:  LGMDNDPSAGSPTETLLRYLLPLNDNVQ
        LG DNDPSAGSPTETLLR LLPLND VQ
Subjt:  LGMDNDPSAGSPTETLLRYLLPLNDNVQ
A0A2G2WGY2 Uncharacterized protein3.6e-0583.87Show/hide
Query:  FDVLGMDNDPSAGSPTETLLRYLLPLNDNVQ
        F   G DNDPSAGSPTETLLR LLPLNDNVQ
Subjt:  FDVLGMDNDPSAGSPTETLLRYLLPLNDNVQ
A0A2G2WGZ9 Regulator of rDNA transcription protein 153.6e-0583.87Show/hide
Query:  FDVLGMDNDPSAGSPTETLLRYLLPLNDNVQ
        F   G DNDPSAGSPTETLLR LLPLNDNVQ
Subjt:  FDVLGMDNDPSAGSPTETLLRYLLPLNDNVQ
W9S2L4 Uncharacterized protein6.2e-0586.21Show/hide
Query:  VLGMDNDPSAGSPTETLLRYLLPLNDNVQ
        V+G DNDPSAGSPTETLLR LLPLND VQ
Subjt:  VLGMDNDPSAGSPTETLLRYLLPLNDNVQ
SwissProt top hitse value%identityAlignment
P0C5Q0 Putative uncharacterized protein YLR154W-F1.0e-0475Show/hide
Query:  VLGMDNDPSAGSPTETLLRYLLPLNDNV
        +L   NDPSAGSPTETLLR L+PLND V
Subjt:  VLGMDNDPSAGSPTETLLRYLLPLNDNV
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTGATGTTTTAGGCATGGATAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTATTACGATATCTCCTTCCTCTAAATGATAATGTTCAG
mRNA sequenceShow/hide mRNA sequence
TTTGATGTTTTAGGCATGGATAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTATTACGATATCTCCTTCCTCTAAATGATAATGTTCAG
Protein sequenceShow/hide protein sequence
FDVLGMDNDPSAGSPTETLLRYLLPLNDNVQ