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MS002770 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002770
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNADH-ubiquinone oxidoreductase chain 1
Genome locationscaffold66:448721..448911
RNA-Seq ExpressionMS002770
SyntenyMS002770
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR001694 - NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBG28320.1 NADH dehydrogenase subunit 1, partial [Raphanus sativus]8.7e-1374.6Show/hide
Query:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN
        S   F LFR APVAT++LSLVAR VVPFDYGMVLS PNIGLLY F   SL VY IIIA WSSN
Subjt:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN

KAG6621729.1 hypothetical protein I3842_Q014300 [Carya illinoinensis]1.5e-1274.6Show/hide
Query:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN
        S   F LFR APVAT++LSLVAR VVPFDYGMVLS PNIGLLY F   SL VY IIIA WSSN
Subjt:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN

QMS45227.1 NADH dehydrogenase subunit 1, partial [Aletris obovata]1.5e-1274.6Show/hide
Query:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN
        S   F LFR APVAT++LSLVAR VVPFDYGMVLS PNIGLLY F   SL VY IIIA WSSN
Subjt:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN

YP_009295069.1 NADH dehydrogenase subunit 1 [Ipomoea nil]1.5e-1274.6Show/hide
Query:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN
        S   F LFR APVAT++LSLVAR VVPFDYGMVLS PNIGLLY F   SL VY IIIA WSSN
Subjt:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN

YP_009493658.1 NADH dehydrogenase subunit 1 [Codonopsis lanceolata]8.7e-1374.6Show/hide
Query:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN
        S   F LFR APVAT++LSLVAR VVPFDYGMVLS PNIGLLY F   SL VY IIIA WSSN
Subjt:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN

TrEMBL top hitse value%identityAlignment
A0A290WKZ7 NADH-ubiquinone oxidoreductase chain 17.2e-1374.6Show/hide
Query:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN
        S   F LFR APVAT++LSLVAR VVPFDYGMVLS PNIGLLY F   SL VY IIIA WSSN
Subjt:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN

A0A2U8XGZ6 NADH-ubiquinone oxidoreductase chain 14.2e-1374.6Show/hide
Query:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN
        S   F LFR APVAT++LSLVAR VVPFDYGMVLS PNIGLLY F   SL VY IIIA WSSN
Subjt:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN

A0A7D7FFZ9 NADH-ubiquinone oxidoreductase chain 17.2e-1374.6Show/hide
Query:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN
        S   F LFR APVAT++LSLVAR VVPFDYGMVLS PNIGLLY F   SL VY IIIA WSSN
Subjt:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN

A0A7G1GBM8 NADH-ubiquinone oxidoreductase chain 14.2e-1374.6Show/hide
Query:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN
        S   F LFR APVAT++LSLVAR VVPFDYGMVLS PNIGLLY F   SL VY IIIA WSSN
Subjt:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN

A0A7S9DG72 NADH dehydrogenase subunit 17.2e-1374.6Show/hide
Query:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN
        S   F LFR APVAT++LSLVAR VVPFDYGMVLS PNIGLLY F   SL VY IIIA WSSN
Subjt:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN

SwissProt top hitse value%identityAlignment
P26845 NADH-ubiquinone oxidoreductase chain 13.0e-0853.97Show/hide
Query:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN
        S     +F  APV T+ L+L A  V+PFDYGMV S  NIG+LY F   SL VY II A W+SN
Subjt:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN

P31839 NADH-ubiquinone oxidoreductase chain 12.4e-1371.43Show/hide
Query:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN
        S   F LFR APVAT++LSLVA  VVPFDYGMVLS  NIGLLY F   SL VY IIIA WSSN
Subjt:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN

P92558 NADH-ubiquinone oxidoreductase chain 11.4e-1371.43Show/hide
Query:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN
        S   F LFR APVAT++LSLVA  VVPFDYGMVLS  NIGLLY F   SL VY IIIA WSSN
Subjt:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN

Q01148 NADH-ubiquinone oxidoreductase chain 11.4e-1371.43Show/hide
Query:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN
        S   F LFR APVAT++LSLVA  VVPFDYGMVLS  NIGLLY F   SL VY IIIA WSSN
Subjt:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN

Q01300 NADH-ubiquinone oxidoreductase chain 12.0e-1574.6Show/hide
Query:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN
        S   F LFR APVAT++LSLVAR VVPFDYGMVLS PNIGLLY F   SL VY IIIA WSSN
Subjt:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN

Arabidopsis top hitse value%identityAlignment
AT2G07785.1 NADH dehydrogenase family protein3.4e-1573.02Show/hide
Query:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN
        S   F LFR APVAT++LSLVAR VVPFDYGMVLS PNIGLLY F   SL VY IIIA  SSN
Subjt:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN

ATMG00516.1 NADH dehydrogenase 1C3.4e-1573.02Show/hide
Query:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN
        S   F LFR APVAT++LSLVAR VVPFDYGMVLS PNIGLLY F   SL VY IIIA  SSN
Subjt:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN

ATMG01120.1 NADH dehydrogenase 1B3.4e-1573.02Show/hide
Query:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN
        S   F LFR APVAT++LSLVAR VVPFDYGMVLS PNIGLLY F   SL VY IIIA  SSN
Subjt:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN

ATMG01275.1 NADH dehydrogenase 1A3.4e-1573.02Show/hide
Query:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN
        S   F LFR APVAT++LSLVAR VVPFDYGMVLS PNIGLLY F   SL VY IIIA  SSN
Subjt:  SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFF-FFSLCVYEIIIASWSSN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCACCGCGTAAATTTCTCCTTTTTAGAAGGGCTCCAGTGGCTACATATATATTAAGTTTGGTCGCTCGAACGGTTGTACCTTTTGATTATGGTATGGTATTATCATATCC
AAACATAGGACTACTTTATTTTTTTTTTTTTTCACTATGTGTTTATGAAATTATTATAGCAAGTTGGTCTAGTAAT
mRNA sequenceShow/hide mRNA sequence
TCACCGCGTAAATTTCTCCTTTTTAGAAGGGCTCCAGTGGCTACATATATATTAAGTTTGGTCGCTCGAACGGTTGTACCTTTTGATTATGGTATGGTATTATCATATCC
AAACATAGGACTACTTTATTTTTTTTTTTTTTCACTATGTGTTTATGAAATTATTATAGCAAGTTGGTCTAGTAAT
Protein sequenceShow/hide protein sequence
SPRKFLLFRRAPVATYILSLVARTVVPFDYGMVLSYPNIGLLYFFFFSLCVYEIIIASWSSN