; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002771 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002771
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUbiquitin-conjugating enzyme E2 36
Genome locationscaffold66:449673..452624
RNA-Seq ExpressionMS002771
SyntenyMS002771
Gene Ontology termsGO:0006301 - postreplication repair (biological process)
GO:0070534 - protein K63-linked ubiquitination (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016874 - ligase activity (molecular function)
GO:0061631 - ubiquitin conjugating enzyme activity (molecular function)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like
IPR023313 - Ubiquitin-conjugating enzyme, active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY13247.1 Ubiquitin-conjugating enzyme 36 isoform 2 [Theobroma cacao]5.2e-62100Show/hide
Query:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
        APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
Subjt:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD

Query:  PLSENIAKHWKTNEAEAVET
        PLSENIAKHWKTNEAEAVET
Subjt:  PLSENIAKHWKTNEAEAVET

ESR55759.1 hypothetical protein CICLE_v10022662mg [Citrus clementina]5.2e-62100Show/hide
Query:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
        APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
Subjt:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD

Query:  PLSENIAKHWKTNEAEAVET
        PLSENIAKHWKTNEAEAVET
Subjt:  PLSENIAKHWKTNEAEAVET

KAB5534570.1 hypothetical protein DKX38_017656 [Salix brachista]5.2e-62100Show/hide
Query:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
        APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
Subjt:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD

Query:  PLSENIAKHWKTNEAEAVET
        PLSENIAKHWKTNEAEAVET
Subjt:  PLSENIAKHWKTNEAEAVET

PNT12874.1 hypothetical protein POPTR_011G111400 [Populus trichocarpa]5.2e-62100Show/hide
Query:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
        APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
Subjt:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD

Query:  PLSENIAKHWKTNEAEAVET
        PLSENIAKHWKTNEAEAVET
Subjt:  PLSENIAKHWKTNEAEAVET

XP_030514700.1 ubiquitin-conjugating enzyme E2 35-like [Rhodamnia argentea]5.2e-62100Show/hide
Query:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
        APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
Subjt:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD

Query:  PLSENIAKHWKTNEAEAVET
        PLSENIAKHWKTNEAEAVET
Subjt:  PLSENIAKHWKTNEAEAVET

TrEMBL top hitse value%identityAlignment
A0A0B0PN86 Ubiquitin-conjugating enzyme E2 35-like protein2.5e-62100Show/hide
Query:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
        APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
Subjt:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD

Query:  PLSENIAKHWKTNEAEAVET
        PLSENIAKHWKTNEAEAVET
Subjt:  PLSENIAKHWKTNEAEAVET

A0A1U8IJE7 ubiquitin-conjugating enzyme E2 36-like2.5e-62100Show/hide
Query:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
        APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
Subjt:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD

Query:  PLSENIAKHWKTNEAEAVET
        PLSENIAKHWKTNEAEAVET
Subjt:  PLSENIAKHWKTNEAEAVET

A0A5D2DM47 UBC core domain-containing protein2.5e-62100Show/hide
Query:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
        APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
Subjt:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD

Query:  PLSENIAKHWKTNEAEAVET
        PLSENIAKHWKTNEAEAVET
Subjt:  PLSENIAKHWKTNEAEAVET

A0A5D2E1C5 UBC core domain-containing protein2.5e-62100Show/hide
Query:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
        APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
Subjt:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD

Query:  PLSENIAKHWKTNEAEAVET
        PLSENIAKHWKTNEAEAVET
Subjt:  PLSENIAKHWKTNEAEAVET

A0A5J5WWQ2 UBC core domain-containing protein2.5e-62100Show/hide
Query:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
        APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
Subjt:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD

Query:  PLSENIAKHWKTNEAEAVET
        PLSENIAKHWKTNEAEAVET
Subjt:  PLSENIAKHWKTNEAEAVET

SwissProt top hitse value%identityAlignment
P61088 Ubiquitin-conjugating enzyme E2 N5.4e-5481.51Show/hide
Query:  PGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDP
        PGI A P E N RYF+V+I GP  SP+EGG FKLELFLPEEYPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDP
Subjt:  PGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDP

Query:  LSENIAKHWKTNEAEAVET
        L+ ++A+ WKTNEA+A+ET
Subjt:  LSENIAKHWKTNEAEAVET

Q0P5K3 Ubiquitin-conjugating enzyme E2 N5.4e-5481.51Show/hide
Query:  PGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDP
        PGI A P E N RYF+V+I GP  SP+EGG FKLELFLPEEYPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDP
Subjt:  PGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDP

Query:  LSENIAKHWKTNEAEAVET
        L+ ++A+ WKTNEA+A+ET
Subjt:  LSENIAKHWKTNEAEAVET

Q94A97 Ubiquitin-conjugating enzyme E2 354.4e-6498.33Show/hide
Query:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
        APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
Subjt:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD

Query:  PLSENIAKHWKTNEAEAVET
        PLSENIAKHWK+NEAEAV+T
Subjt:  PLSENIAKHWKTNEAEAVET

Q95XX0 Ubiquitin-conjugating enzyme E2 133.2e-5483.19Show/hide
Query:  PGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDP
        PGISA+P E N RYF+VMI GP  SP+ GGVFKLELFLPEEYPMAAPKVRF+TKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP+DP
Subjt:  PGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDP

Query:  LSENIAKHWKTNEAEAVET
        L+ ++A+ WKTNEAEA++T
Subjt:  LSENIAKHWKTNEAEAVET

Q9FZ48 Ubiquitin-conjugating enzyme E2 365.8e-6498.33Show/hide
Query:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
        APGISASPSE+NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
Subjt:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD

Query:  PLSENIAKHWKTNEAEAVET
        PLSENIAKHWK+NEAEAVET
Subjt:  PLSENIAKHWKTNEAEAVET

Arabidopsis top hitse value%identityAlignment
AT1G16890.1 ubiquitin-conjugating enzyme 361.7e-5899.07Show/hide
Query:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
        MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK+
Subjt:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT

Query:  NEAEAVET
        NEAEAVET
Subjt:  NEAEAVET

AT1G16890.2 ubiquitin-conjugating enzyme 364.1e-6598.33Show/hide
Query:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
        APGISASPSE+NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
Subjt:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD

Query:  PLSENIAKHWKTNEAEAVET
        PLSENIAKHWK+NEAEAVET
Subjt:  PLSENIAKHWKTNEAEAVET

AT1G16890.3 ubiquitin-conjugating enzyme 369.1e-6597.5Show/hide
Query:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
        +PGISASPSE+NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
Subjt:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD

Query:  PLSENIAKHWKTNEAEAVET
        PLSENIAKHWK+NEAEAVET
Subjt:  PLSENIAKHWKTNEAEAVET

AT1G78870.1 ubiquitin-conjugating enzyme 357.7e-6497.52Show/hide
Query:  APGISASPSEDNMRYFNVMILGPTQSPYEG-GVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
        APGISASPSEDNMRYFNVMILGPTQSPYEG GVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Subjt:  APGISASPSEDNMRYFNVMILGPTQSPYEG-GVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD

Query:  DPLSENIAKHWKTNEAEAVET
        DPLSENIAKHWK+NEAEAV+T
Subjt:  DPLSENIAKHWKTNEAEAVET

AT1G78870.2 ubiquitin-conjugating enzyme 353.1e-6598.33Show/hide
Query:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
        APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD
Subjt:  APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD

Query:  PLSENIAKHWKTNEAEAVET
        PLSENIAKHWK+NEAEAV+T
Subjt:  PLSENIAKHWKTNEAEAVET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCCCCCGGGATTAGTGCCTCGCCGTCAGAAGACAACATGCGATATTTTAACGTGATGATTCTTGGCCCGACCCAGTCTCCCTATGAAGGAGGAGTTTTCAAGTTGGAACT
ATTTTTGCCTGAAGAGTATCCTATGGCTGCTCCCAAGGTTCGATTTCTCACCAAAATTTATCACCCGAATATTGATAAGCTTGGGAGGATATGCCTTGATATTCTGAAAG
ACAAATGGAGTCCTGCTCTACAGATACGAACTGTACTTTTGAGTATTCAAGCACTTCTGAGTGCTCCAAATCCAGATGATCCGCTTTCTGAGAACATTGCAAAGCATTGG
AAAACAAATGAGGCAGAAGCCGTCGAAACA
mRNA sequenceShow/hide mRNA sequence
GCCCCCGGGATTAGTGCCTCGCCGTCAGAAGACAACATGCGATATTTTAACGTGATGATTCTTGGCCCGACCCAGTCTCCCTATGAAGGAGGAGTTTTCAAGTTGGAACT
ATTTTTGCCTGAAGAGTATCCTATGGCTGCTCCCAAGGTTCGATTTCTCACCAAAATTTATCACCCGAATATTGATAAGCTTGGGAGGATATGCCTTGATATTCTGAAAG
ACAAATGGAGTCCTGCTCTACAGATACGAACTGTACTTTTGAGTATTCAAGCACTTCTGAGTGCTCCAAATCCAGATGATCCGCTTTCTGAGAACATTGCAAAGCATTGG
AAAACAAATGAGGCAGAAGCCGTCGAAACA
Protein sequenceShow/hide protein sequence
APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHW
KTNEAEAVET