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MS002775 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002775
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionpathogen-related protein-like
Genome locationscaffold66:479595..479897
RNA-Seq ExpressionMS002775
SyntenyMS002775
Gene Ontology termsNA
InterPro domainsIPR032710 - NTF2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008451756.1 PREDICTED: pathogen-related protein isoform X1 [Cucumis melo]6.6e-4278.22Show/hide
Query:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK
        GREGLSGEETLRIG +NA LKS LP+EFQY+  E+ET ESSHE F++CFPRGFAWEV EVYS PPLIAFKFRHWGFFEGP+K HSPTGEL++F+G+ TLK
Subjt:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK

Query:  V
        V
Subjt:  V

XP_022142749.1 pathogen-related protein-like [Momordica charantia]4.5e-4383.84Show/hide
Query:  EGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLKV
        EGLSGEE ++IG FNA+LKSSLP+EFQYFNTEKE IESSH+EFK CFPRGFAWEV EVYS PPLIA KFRHWGFFEGP+K HSPTGELIQFFGM+T KV
Subjt:  EGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLKV

XP_022142750.1 pathogen-related protein-like [Momordica charantia]7.7e-4381.19Show/hide
Query:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK
        GREG+SGE+ LR+G FNALLKSSLP+EF +F  E+ET ES+H+EF  CFPRGFAWEVTEVYSAPPLIAFKFRHWG+FEGPYK HSPTGELIQFFGMMTL+
Subjt:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK

Query:  V
        V
Subjt:  V

XP_022142782.1 pathogen-related protein-like [Momordica charantia]1.2e-5198.02Show/hide
Query:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK
        GREGLSGEET RIGPFNALLKSSLPKEFQYFNTEKET ESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK
Subjt:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK

Query:  V
        V
Subjt:  V

XP_022142928.1 pathogen-related protein-like [Momordica charantia]7.7e-4380.2Show/hide
Query:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK
        GREGLSGEETLR+G +NAL+KSSLP+EFQY+  E ET ESSHE F++CFPRGFAWEV EVYS PPLIAFKFRHWGFFEGPYK HSPTGEL+QF+G+ TLK
Subjt:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK

Query:  V
        V
Subjt:  V

TrEMBL top hitse value%identityAlignment
A0A1S3BS69 pathogen-related protein isoform X13.2e-4278.22Show/hide
Query:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK
        GREGLSGEETLRIG +NA LKS LP+EFQY+  E+ET ESSHE F++CFPRGFAWEV EVYS PPLIAFKFRHWGFFEGP+K HSPTGEL++F+G+ TLK
Subjt:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK

Query:  V
        V
Subjt:  V

A0A6J1CLT6 pathogen-related protein-like3.7e-4381.19Show/hide
Query:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK
        GREG+SGE+ LR+G FNALLKSSLP+EF +F  E+ET ES+H+EF  CFPRGFAWEVTEVYSAPPLIAFKFRHWG+FEGPYK HSPTGELIQFFGMMTL+
Subjt:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK

Query:  V
        V
Subjt:  V

A0A6J1CMD2 pathogen-related protein-like2.2e-4383.84Show/hide
Query:  EGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLKV
        EGLSGEE ++IG FNA+LKSSLP+EFQYFNTEKE IESSH+EFK CFPRGFAWEV EVYS PPLIA KFRHWGFFEGP+K HSPTGELIQFFGM+T KV
Subjt:  EGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLKV

A0A6J1CNV1 pathogen-related protein-like5.8e-5298.02Show/hide
Query:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK
        GREGLSGEET RIGPFNALLKSSLPKEFQYFNTEKET ESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK
Subjt:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK

Query:  V
        V
Subjt:  V

A0A6J1CPH1 pathogen-related protein-like3.7e-4380.2Show/hide
Query:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK
        GREGLSGEETLR+G +NAL+KSSLP+EFQY+  E ET ESSHE F++CFPRGFAWEV EVYS PPLIAFKFRHWGFFEGPYK HSPTGEL+QF+G+ TLK
Subjt:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK

Query:  V
        V
Subjt:  V

SwissProt top hitse value%identityAlignment
P16273 Pathogen-related protein1.6e-2247.57Show/hide
Query:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAP--PLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMT
        G + L+ EE + +G +NA L ++LP E + ++ E E++ES+   F   FPRGFA EV +VYS+P  P IAFKFRHWG+ EGP+K H P G  ++FFG+  
Subjt:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAP--PLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMT

Query:  LKV
          V
Subjt:  LKV

Arabidopsis top hitse value%identityAlignment
AT1G78780.1 pathogenesis-related family protein2.5e-3966.34Show/hide
Query:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK
        GREGLS EETLR+G +NALLK+SLP+EFQY+  E+E+ ESSH+ F++  PRGFAWE+  VYS PP+IAFKFRHWG+FEG +K H+PTGE++QF G+  LK
Subjt:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK

Query:  V
        V
Subjt:  V

AT1G78780.2 pathogenesis-related family protein2.5e-3966.34Show/hide
Query:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK
        GREGLS EETLR+G +NALLK+SLP+EFQY+  E+E+ ESSH+ F++  PRGFAWE+  VYS PP+IAFKFRHWG+FEG +K H+PTGE++QF G+  LK
Subjt:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK

Query:  V
        V
Subjt:  V

AT1G78780.3 pathogenesis-related family protein2.5e-3966.34Show/hide
Query:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK
        GREGLS EETLR+G +NALLK+SLP+EFQY+  E+E+ ESSH+ F++  PRGFAWE+  VYS PP+IAFKFRHWG+FEG +K H+PTGE++QF G+  LK
Subjt:  GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLK

Query:  V
        V
Subjt:  V

AT1G78780.4 pathogenesis-related family protein1.8e-3765.31Show/hide
Query:  GLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLKV
        GLS EETLR+G +NALLK+SLP+EFQY+  E+E+ ESSH+ F++  PRGFAWE+  VYS PP+IAFKFRHWG+FEG +K H+PTGE++QF G+  LKV
Subjt:  GLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAAGAGAGGGGCTGTCTGGAGAAGAAACACTGAGGATTGGGCCCTTCAATGCATTGCTGAAGAGTTCTCTACCAAAAGAGTTTCAATATTTCAATACAGAGAAAGAGAC
AATTGAATCTTCTCATGAAGAATTTAAGGCTTGTTTTCCAAGAGGGTTTGCATGGGAAGTTACAGAAGTTTATTCAGCTCCTCCTTTGATTGCCTTCAAATTTAGGCATT
GGGGTTTCTTTGAAGGACCTTACAAAGACCATTCCCCCACTGGTGAATTGATTCAATTCTTTGGTATGATGACTCTCAAGGTA
mRNA sequenceShow/hide mRNA sequence
GGAAGAGAGGGGCTGTCTGGAGAAGAAACACTGAGGATTGGGCCCTTCAATGCATTGCTGAAGAGTTCTCTACCAAAAGAGTTTCAATATTTCAATACAGAGAAAGAGAC
AATTGAATCTTCTCATGAAGAATTTAAGGCTTGTTTTCCAAGAGGGTTTGCATGGGAAGTTACAGAAGTTTATTCAGCTCCTCCTTTGATTGCCTTCAAATTTAGGCATT
GGGGTTTCTTTGAAGGACCTTACAAAGACCATTCCCCCACTGGTGAATTGATTCAATTCTTTGGTATGATGACTCTCAAGGTA
Protein sequenceShow/hide protein sequence
GREGLSGEETLRIGPFNALLKSSLPKEFQYFNTEKETIESSHEEFKACFPRGFAWEVTEVYSAPPLIAFKFRHWGFFEGPYKDHSPTGELIQFFGMMTLKV