; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002780 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002780
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold66:527601..527909
RNA-Seq ExpressionMS002780
SyntenyMS002780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015053.1 hypothetical protein SDJN02_22686, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-3482Show/hide
Query:  SAASSSSSSSSSSFLECTSP---SVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVFSKLDSAKKAWRKFVICFRVSA
        S++SSSSSSSSSSFL+C +P   SVQLVSK  SDRLLGKFFDAS+FDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEV SKL++AKKAWRK + CF VSA
Subjt:  SAASSSSSSSSSSFLECTSP---SVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVFSKLDSAKKAWRKFVICFRVSA
KAG7031141.1 hypothetical protein SDJN02_05180, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-3583.5Show/hide
Query:  MPISAASSSSSSSSSSFLEC---TSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVFSKLDSAKKAWRKFVICFR
        MPIS  + SS+ SSS F+EC   T PSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSP DVCSGYEV SKL+ AK AWRKFVICFR
Subjt:  MPISAASSSSSSSSSSFLEC---TSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVFSKLDSAKKAWRKFVICFR

Query:  VSA
        VSA
Subjt:  VSA
XP_022142869.1 uncharacterized protein LOC111012878 [Momordica charantia]3.9e-4296Show/hide
Query:  MPISAASSSSSSSSSSFLEC---TSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVFSKLDSAKKAWRKFVICFR
        MPISAASSSSSSSSSSFLEC   TSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPA+VCSGYEVFSKLDSAKKAWRKFVICFR
Subjt:  MPISAASSSSSSSSSSFLEC---TSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVFSKLDSAKKAWRKFVICFR
XP_038876207.1 uncharacterized protein LOC120068490 isoform X1 [Benincasa hispida]5.5e-3685.86Show/hide
Query:  MPISAASSSSSSSSSSFLEC---TSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVFSKLDSAKKAWRKFVICF
        MPISA SSSSSS S+SFLEC   TSPSVQLVSKSVSDRLLGKFFDAS+FDFDYEQSSLWSPPI R+VFLDSPADVCSGY V SKLD A+KAWRKF+ICF
Subjt:  MPISAASSSSSSSSSSFLEC---TSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVFSKLDSAKKAWRKFVICF
XP_038876217.1 uncharacterized protein LOC120068490 isoform X2 [Benincasa hispida]5.5e-3685.86Show/hide
Query:  MPISAASSSSSSSSSSFLEC---TSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVFSKLDSAKKAWRKFVICF
        MPISA SSSSSS S+SFLEC   TSPSVQLVSKSVSDRLLGKFFDAS+FDFDYEQSSLWSPPI R+VFLDSPADVCSGY V SKLD A+KAWRKF+ICF
Subjt:  MPISAASSSSSSSSSSFLEC---TSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVFSKLDSAKKAWRKFVICF
TrEMBL top hitse value%identityAlignment
A0A6J1CMP9 uncharacterized protein LOC1110128781.9e-4296Show/hide
Query:  MPISAASSSSSSSSSSFLEC---TSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVFSKLDSAKKAWRKFVICFR
        MPISAASSSSSSSSSSFLEC   TSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPA+VCSGYEVFSKLDSAKKAWRKFVICFR
Subjt:  MPISAASSSSSSSSSSFLEC---TSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVFSKLDSAKKAWRKFVICFR
A0A6J1EYJ9 uncharacterized protein LOC1114376035.5e-3482.29Show/hide
Query:  SAASSSSSSSSSSFLECTSP---SVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVFSKLDSAKKAWRKFVICF
        S++SSSSSSSSSSFL+C +P   SVQLVSK  SDRLLGKFFDAS+FDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEV SKL++AKKAWRK + CF
Subjt:  SAASSSSSSSSSSFLECTSP---SVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVFSKLDSAKKAWRKFVICF
A0A6J1J4Z5 uncharacterized protein LOC111482673 isoform X24.2e-3480.81Show/hide
Query:  MPISAASSSSSSSSSSFLECTSP---SVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVFSKLDSAKKAWRKFVICF
        MP SA SSSSSSSSSSFL+C +P   SVQLVSKS SDRLL KFFDAS+F+FDYEQSSLWSPPIPRRVFLDSP DVCSGYEV SKL++ KKAWRKF+ CF
Subjt:  MPISAASSSSSSSSSSFLECTSP---SVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVFSKLDSAKKAWRKFVICF
A0A6J1J7J0 uncharacterized protein LOC1114820711.9e-3483Show/hide
Query:  MPISAASSSSSSSSSSFLEC---TSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVFSKLDSAKKAWRKFVICFR
        MPIS  + SS+ SSS F+EC   T PSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSP DVCSGYEV SKL+ AK AWRKFVICFR
Subjt:  MPISAASSSSSSSSSSFLEC---TSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVFSKLDSAKKAWRKFVICFR
A0A6J1J8D3 uncharacterized protein LOC111482673 isoform X14.2e-3480.81Show/hide
Query:  MPISAASSSSSSSSSSFLECTSP---SVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVFSKLDSAKKAWRKFVICF
        MP SA SSSSSSSSSSFL+C +P   SVQLVSKS SDRLL KFFDAS+F+FDYEQSSLWSPPIPRRVFLDSP DVCSGYEV SKL++ KKAWRKF+ CF
Subjt:  MPISAASSSSSSSSSSFLECTSP---SVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVFSKLDSAKKAWRKFVICF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G15140.1 unknown protein9.1e-0545.61Show/hide
Query:  TSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVF----LDSPADVC
        T+  V+ +   +   LL KF D S F FDY QSSLWSP +PR       LDS + VC
Subjt:  TSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVF----LDSPADVC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGATCTCCGCCGCTTCTTCTTCTTCTTCCTCCTCCTCCTCCTCGTTTCTCGAATGTACCAGTCCGAGCGTTCAACTCGTATCGAAATCGGTATCGGATCGGCTTCT
CGGCAAGTTCTTCGACGCCTCGCAATTCGACTTCGATTACGAGCAGAGTAGCTTGTGGTCTCCGCCAATTCCGAGGCGAGTGTTTTTGGATTCGCCGGCCGACGTTTGCT
CCGGCTACGAGGTTTTCTCGAAGCTCGACAGTGCGAAGAAGGCGTGGAGGAAATTCGTTATCTGTTTCAGAGTAAGTGCTCGCGAATCG
mRNA sequenceShow/hide mRNA sequence
ATGCCGATCTCCGCCGCTTCTTCTTCTTCTTCCTCCTCCTCCTCCTCGTTTCTCGAATGTACCAGTCCGAGCGTTCAACTCGTATCGAAATCGGTATCGGATCGGCTTCT
CGGCAAGTTCTTCGACGCCTCGCAATTCGACTTCGATTACGAGCAGAGTAGCTTGTGGTCTCCGCCAATTCCGAGGCGAGTGTTTTTGGATTCGCCGGCCGACGTTTGCT
CCGGCTACGAGGTTTTCTCGAAGCTCGACAGTGCGAAGAAGGCGTGGAGGAAATTCGTTATCTGTTTCAGAGTAAGTGCTCGCGAATCG
Protein sequenceShow/hide protein sequence
MPISAASSSSSSSSSSFLECTSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVFSKLDSAKKAWRKFVICFRVSARES