; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002800 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002800
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionctenidin-3-like
Genome locationscaffold66:699895..700446
RNA-Seq ExpressionMS002800
SyntenyMS002800
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600486.1 hypothetical protein SDJN03_05719, partial [Cucurbita argyrosperma subsp. sororia]2.8e-1447.2Show/hide
Query:  MKPYTTILIICSSVIAAVVILCCLCIIFGRKKKETGRLTPASSSTIGSRL----PWPRQTYHVHDIEPGQGARTNRQHTQRSGQDTRTNRQGA-------
        +KP   ILIIC+S++AAVVILCCLCII GRK+K++ R TP  S +I SR     PWPRQ+Y  +D+E GQG R  RQ T RS Q   ++R GA       
Subjt:  MKPYTTILIICSSVIAAVVILCCLCIIFGRKKKETGRLTPASSSTIGSRL----PWPRQTYHVHDIEPGQGARTNRQHTQRSGQDTRTNRQGA-------

Query:  -------------------RGSGIKDGGMAILAGAGAAIATAAVIAGLSSEGREGVYGDDCGDGGSSDGYGYDGSCGDGDGGGDCGDGGEGGGGGCGDGG
                           + SG KDGGMAI AGAGAA+A AA   GLSS G +         GG+ DGY  D S  DG  G  CG+G   GG      G
Subjt:  -------------------RGSGIKDGGMAILAGAGAAIATAAVIAGLSSEGREGVYGDDCGDGGSSDGYGYDGSCGDGDGGGDCGDGGEGGGGGCGDGG

Query:  GGGGCGGGCGGCGG
        GGG CG GCG  GG
Subjt:  GGGGCGGGCGGCGG

PON60285.1 hypothetical protein TorRG33x02_285070 [Trema orientale]2.1e-0641.08Show/hide
Query:  MKPYTTILIICSSVIAAVVILCCLCIIFGRKKKETGRLTPASSSTIGSRLPWPRQTYHV-HDIEPGQGARTNRQHTQRSGQDTRTNRQGARGSGIKDGGM
        MK Y   L+ C SVIAAV+IL CLC    +KK +T    P    ++    P  ++ Y    DIE G+G +                    + SG KDGGM
Subjt:  MKPYTTILIICSSVIAAVVILCCLCIIFGRKKKETGRLTPASSSTIGSRLPWPRQTYHV-HDIEPGQGARTNRQHTQRSGQDTRTNRQGARGSGIKDGGM

Query:  AILAGAGAAIATAAVIAGLSSEGREGVYGDDCGDGGSSDGYGYDGSCGDGDGGGDCGDGGEGGGGGCGDGGGGGGCGGGCGGCGG
         ILAGAGAA+AT A +A +SS          CG GG  D              GD G GG+ GGGGC   GG GGC GGCGGCGG
Subjt:  AILAGAGAAIATAAVIAGLSSEGREGVYGDDCGDGGSSDGYGYDGSCGDGDGGGDCGDGGEGGGGGCGDGGGGGGCGGGCGGCGG

XP_022142785.1 ctenidin-3-like [Momordica charantia]5.5e-7191.3Show/hide
Query:  MKPYTTILIICSSVIAAVVILCCLCIIFGRKKKETGRLTPASSSTIGSRLPWPRQTYHVHDIEPGQGARTNRQHTQRSGQDTRTNRQGARGSGIKDGGMA
        MKPYTTILIICSSVIAAVVILCCLCIIFGRKKKETGRLTPASSSTIGSRLPWPRQTYHVHDIEPGQGA              RTNRQGARGSGIKDGGMA
Subjt:  MKPYTTILIICSSVIAAVVILCCLCIIFGRKKKETGRLTPASSSTIGSRLPWPRQTYHVHDIEPGQGARTNRQHTQRSGQDTRTNRQGARGSGIKDGGMA

Query:  ILAGAGAAIATAAVIAGLSSEGREGVYGDDCGDGGSSDGYGYDGSCGDGDGGGDCGDGGEGGGGGCGDGGGGGGCGGGCGGCGG
        ILAGAG AIATAAVIAGLSSEGREGVYGDDCGDGGSSDGYGYDGSCGDGDGGGDCGDGG+GGGGGCGDGGGGGGCGGGCGGCGG
Subjt:  ILAGAGAAIATAAVIAGLSSEGREGVYGDDCGDGGSSDGYGYDGSCGDGDGGGDCGDGGEGGGGGCGDGGGGGGCGGGCGGCGG

XP_022942031.1 glycine-rich RNA-binding protein GRP2A-like [Cucurbita moschata]1.8e-1348.17Show/hide
Query:  MKPYTTILIICSSVIAAVVILCCLCIIFGRKKKETGRLTPASSSTIGSRL-----PWPRQTYHVHDIEPGQGARTNRQHTQRSGQDTRTNRQGA------
        +KP   ILIIC+S++AAVVILCCLCII GRK+K++ R TP  S +I SR      PWPRQ+Y  +D+E GQG R  RQ T RS Q   ++R GA      
Subjt:  MKPYTTILIICSSVIAAVVILCCLCIIFGRKKKETGRLTPASSSTIGSRL-----PWPRQTYHVHDIEPGQGARTNRQHTQRSGQDTRTNRQGA------

Query:  --------------------RGSGIKDGGMAILAGAGAAIATAAVIAGLSSEGRE--GVYGDD-CGDGGSSDGYGYDGSCGDGDGGGDCGDGGEGGGGGC
                            + SG KDGGMAI AGAGAA+A AA   GLSS G +  G  GD   GD   +DGYG   SCG+G+      DGG GGGG C
Subjt:  --------------------RGSGIKDGGMAILAGAGAAIATAAVIAGLSSEGRE--GVYGDD-CGDGGSSDGYGYDGSCGDGDGGGDCGDGGEGGGGGC

Query:  GDGGGGGGCGGGCGGCGG
        G G G  G G  CG  GG
Subjt:  GDGGGGGGCGGGCGGCGG

XP_023543717.1 glycine-rich RNA-binding protein GRP1A-like [Cucurbita pepo subsp. pepo]8.9e-1347.93Show/hide
Query:  MKPYTTILIICSSVIAAVVILCCLCIIFGRKKKETGRLTPASSSTIGSRL----PWPRQTYHVHDIEPGQGARTNRQHTQRSGQDTRTNRQGA-------
        +KP   ILIIC+S++AAVVILCCLCII GR++K++ R TP  S +I SR     PWPRQ+Y  +D+E GQG R  RQ T RS Q   ++R GA       
Subjt:  MKPYTTILIICSSVIAAVVILCCLCIIFGRKKKETGRLTPASSSTIGSRL----PWPRQTYHVHDIEPGQGARTNRQHTQRSGQDTRTNRQGA-------

Query:  -------------------RGSGIKDGGMAILAGAGAAIATAAVIAGLSSEGREGVYGDDCGDGGSSDGYGYDGSCGDGDG---GGDCGDGGEGGGGGCG
                           + SG KDGGMAILAGAGAA+A AA   GLSS G +         GG+ DGY  DGS  DG G   G    DGG GGGG CG
Subjt:  -------------------RGSGIKDGGMAILAGAGAAIATAAVIAGLSSEGREGVYGDDCGDGGSSDGYGYDGSCGDGDG---GGDCGDGGEGGGGGCG

Query:  DGGGGGGCGGGCGGCGG
         G G  G G  CG  GG
Subjt:  DGGGGGGCGGGCGGCGG

TrEMBL top hitse value%identityAlignment
A0A2P5BBV5 Uncharacterized protein6.7e-0640.96Show/hide
Query:  MKPYTTILIICSSVIAAVVILCCLCIIFGRKKKETGRLTPASSSTIGSRLPWPRQTYHV-HDIEPGQGARTNRQHTQRSGQDTRTNRQGARGSGIKDGGM
        MK Y   L+ C SVIAAV+IL CLC     KKK+T    P    ++    P  ++ Y    DIE G+G                      + SG KDGGM
Subjt:  MKPYTTILIICSSVIAAVVILCCLCIIFGRKKKETGRLTPASSSTIGSRLPWPRQTYHV-HDIEPGQGARTNRQHTQRSGQDTRTNRQGARGSGIKDGGM

Query:  AILAGAGAAIATAAVIAGLSSEGREGVYGDDCGDGGSSDGYGYDGSCGDGDGGGDCGDGGEGGGGGCGDGGGG-GGCG--GGCGGCGG
         ILAGAGA + T A +A +SS                         CG G GGG  G GG+G  GG GDGGGG GGCG  GGCGGCGG
Subjt:  AILAGAGAAIATAAVIAGLSSEGREGVYGDDCGDGGSSDGYGYDGSCGDGDGGGDCGDGGEGGGGGCGDGGGG-GGCG--GGCGGCGG

A0A2P5CH37 Uncharacterized protein1.0e-0641.08Show/hide
Query:  MKPYTTILIICSSVIAAVVILCCLCIIFGRKKKETGRLTPASSSTIGSRLPWPRQTYHV-HDIEPGQGARTNRQHTQRSGQDTRTNRQGARGSGIKDGGM
        MK Y   L+ C SVIAAV+IL CLC    +KK +T    P    ++    P  ++ Y    DIE G+G +                    + SG KDGGM
Subjt:  MKPYTTILIICSSVIAAVVILCCLCIIFGRKKKETGRLTPASSSTIGSRLPWPRQTYHV-HDIEPGQGARTNRQHTQRSGQDTRTNRQGARGSGIKDGGM

Query:  AILAGAGAAIATAAVIAGLSSEGREGVYGDDCGDGGSSDGYGYDGSCGDGDGGGDCGDGGEGGGGGCGDGGGGGGCGGGCGGCGG
         ILAGAGAA+AT A +A +SS          CG GG  D              GD G GG+ GGGGC   GG GGC GGCGGCGG
Subjt:  AILAGAGAAIATAAVIAGLSSEGREGVYGDDCGDGGSSDGYGYDGSCGDGDGGGDCGDGGEGGGGGCGDGGGGGGCGGGCGGCGG

A0A6J1CLX2 ctenidin-3-like2.7e-7191.3Show/hide
Query:  MKPYTTILIICSSVIAAVVILCCLCIIFGRKKKETGRLTPASSSTIGSRLPWPRQTYHVHDIEPGQGARTNRQHTQRSGQDTRTNRQGARGSGIKDGGMA
        MKPYTTILIICSSVIAAVVILCCLCIIFGRKKKETGRLTPASSSTIGSRLPWPRQTYHVHDIEPGQGA              RTNRQGARGSGIKDGGMA
Subjt:  MKPYTTILIICSSVIAAVVILCCLCIIFGRKKKETGRLTPASSSTIGSRLPWPRQTYHVHDIEPGQGARTNRQHTQRSGQDTRTNRQGARGSGIKDGGMA

Query:  ILAGAGAAIATAAVIAGLSSEGREGVYGDDCGDGGSSDGYGYDGSCGDGDGGGDCGDGGEGGGGGCGDGGGGGGCGGGCGGCGG
        ILAGAG AIATAAVIAGLSSEGREGVYGDDCGDGGSSDGYGYDGSCGDGDGGGDCGDGG+GGGGGCGDGGGGGGCGGGCGGCGG
Subjt:  ILAGAGAAIATAAVIAGLSSEGREGVYGDDCGDGGSSDGYGYDGSCGDGDGGGDCGDGGEGGGGGCGDGGGGGGCGGGCGGCGG

A0A6J1FMR9 glycine-rich RNA-binding protein GRP2A-like8.7e-1448.17Show/hide
Query:  MKPYTTILIICSSVIAAVVILCCLCIIFGRKKKETGRLTPASSSTIGSRL-----PWPRQTYHVHDIEPGQGARTNRQHTQRSGQDTRTNRQGA------
        +KP   ILIIC+S++AAVVILCCLCII GRK+K++ R TP  S +I SR      PWPRQ+Y  +D+E GQG R  RQ T RS Q   ++R GA      
Subjt:  MKPYTTILIICSSVIAAVVILCCLCIIFGRKKKETGRLTPASSSTIGSRL-----PWPRQTYHVHDIEPGQGARTNRQHTQRSGQDTRTNRQGA------

Query:  --------------------RGSGIKDGGMAILAGAGAAIATAAVIAGLSSEGRE--GVYGDD-CGDGGSSDGYGYDGSCGDGDGGGDCGDGGEGGGGGC
                            + SG KDGGMAI AGAGAA+A AA   GLSS G +  G  GD   GD   +DGYG   SCG+G+      DGG GGGG C
Subjt:  --------------------RGSGIKDGGMAILAGAGAAIATAAVIAGLSSEGRE--GVYGDD-CGDGGSSDGYGYDGSCGDGDGGGDCGDGGEGGGGGC

Query:  GDGGGGGGCGGGCGGCGG
        G G G  G G  CG  GG
Subjt:  GDGGGGGGCGGGCGGCGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACCTTATACCACCATTCTCATAATCTGCAGTTCTGTGATAGCTGCAGTTGTGATTTTATGTTGTCTTTGCATAATTTTCGGTCGTAAGAAGAAGGAAACAGGACG
ACTAACTCCAGCTTCGAGTTCAACTATTGGTTCGAGGCTGCCATGGCCGCGACAAACATATCATGTTCATGATATTGAACCTGGACAAGGGGCTCGAACAAACAGACAAC
ACACACAAAGAAGTGGACAAGACACTCGAACAAACAGACAGGGTGCTCGAGGAAGCGGGATCAAGGACGGCGGGATGGCCATCTTGGCTGGAGCAGGCGCTGCTATAGCT
ACTGCAGCTGTGATTGCCGGTTTGAGTAGCGAAGGAAGAGAGGGTGTCTATGGTGATGACTGTGGAGATGGTGGCAGCAGCGATGGTTATGGTTATGATGGTAGTTGTGG
AGATGGTGACGGTGGCGGTGATTGTGGAGATGGTGGCGAAGGCGGAGGTGGCGGCTGTGGAGATGGTGGCGGGGGCGGAGGCTGTGGTGGTGGTTGTGGAGGATGTGGTG
GT
mRNA sequenceShow/hide mRNA sequence
ATGAAACCTTATACCACCATTCTCATAATCTGCAGTTCTGTGATAGCTGCAGTTGTGATTTTATGTTGTCTTTGCATAATTTTCGGTCGTAAGAAGAAGGAAACAGGACG
ACTAACTCCAGCTTCGAGTTCAACTATTGGTTCGAGGCTGCCATGGCCGCGACAAACATATCATGTTCATGATATTGAACCTGGACAAGGGGCTCGAACAAACAGACAAC
ACACACAAAGAAGTGGACAAGACACTCGAACAAACAGACAGGGTGCTCGAGGAAGCGGGATCAAGGACGGCGGGATGGCCATCTTGGCTGGAGCAGGCGCTGCTATAGCT
ACTGCAGCTGTGATTGCCGGTTTGAGTAGCGAAGGAAGAGAGGGTGTCTATGGTGATGACTGTGGAGATGGTGGCAGCAGCGATGGTTATGGTTATGATGGTAGTTGTGG
AGATGGTGACGGTGGCGGTGATTGTGGAGATGGTGGCGAAGGCGGAGGTGGCGGCTGTGGAGATGGTGGCGGGGGCGGAGGCTGTGGTGGTGGTTGTGGAGGATGTGGTG
GT
Protein sequenceShow/hide protein sequence
MKPYTTILIICSSVIAAVVILCCLCIIFGRKKKETGRLTPASSSTIGSRLPWPRQTYHVHDIEPGQGARTNRQHTQRSGQDTRTNRQGARGSGIKDGGMAILAGAGAAIA
TAAVIAGLSSEGREGVYGDDCGDGGSSDGYGYDGSCGDGDGGGDCGDGGEGGGGGCGDGGGGGGCGGGCGGCGG