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MS002810 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002810
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionVQ motif-containing protein 10-like
Genome locationscaffold66:805608..805823
RNA-Seq ExpressionMS002810
SyntenyMS002810
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039608 - VQ motif-containing protein 1/10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063001.1 VQ motif-containing protein 1-like [Cucumis melo var. makuwa]2.2e-1573.91Show/hide
Query:  STRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMRDSSFKEFQRVLREMAK
        STRVVIIDTKYV TDAKSFKTVVQKLTGKD   A  E+ R   G + +SSL+RDSSFKEFQRVLREM +
Subjt:  STRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMRDSSFKEFQRVLREMAK

KAG6577059.1 VQ motif-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]7.5e-1677.46Show/hide
Query:  APSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMRDSSFKEFQRVLREMAK
        A STRVVIIDTKYV TDAKSFKTVVQKLTGKDP   AEE+R   G G+ +SSL+RDSSFKEFQRVLREM +
Subjt:  APSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMRDSSFKEFQRVLREMAK

KAG6600481.1 VQ motif-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1577.14Show/hide
Query:  EAPSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMRDSSFKEFQRVLREM
        EA STRVVIIDTKYVHTDAKSFKTVVQKLTGKDP  AAEE+R++GGG S S  ++ DSSFK+FQ  LREM
Subjt:  EAPSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMRDSSFKEFQRVLREM

KGN53544.1 hypothetical protein Csa_014778 [Cucumis sativus]9.8e-1672.6Show/hide
Query:  EAP-STRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMRDSSFKEFQRVLREMAK
        EAP STRVVIIDTKYV TDAKSFKTVVQKLTGKD      E+ R   G + +SSL+RDSSFKEFQRVLREM +
Subjt:  EAP-STRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMRDSSFKEFQRVLREMAK

XP_022142787.1 VQ motif-containing protein 10-like [Momordica charantia]5.0e-2898.61Show/hide
Query:  EAPSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMRDSSFKEFQRVLREMAK
        EAPSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSL RDSSFKEFQRVLREMAK
Subjt:  EAPSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMRDSSFKEFQRVLREMAK

TrEMBL top hitse value%identityAlignment
A0A0A0KXJ0 VQ domain-containing protein4.8e-1672.6Show/hide
Query:  EAP-STRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMRDSSFKEFQRVLREMAK
        EAP STRVVIIDTKYV TDAKSFKTVVQKLTGKD      E+ R   G + +SSL+RDSSFKEFQRVLREM +
Subjt:  EAP-STRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMRDSSFKEFQRVLREMAK

A0A3Q0EY25 VQ motif-containing protein 11.3e-0864.18Show/hide
Query:  RVVIIDTKYVHTDAKSFKTVVQKLTGKD-PAAAAEEDR-RSGGGGSGSSSLMRDSSFKEFQRVLREM
        +VVII+T+YV TDA SFK+VVQKLTGKD     A+ DR R   GG+  S LMRD SFKEF R+LREM
Subjt:  RVVIIDTKYVHTDAKSFKTVVQKLTGKD-PAAAAEEDR-RSGGGGSGSSSLMRDSSFKEFQRVLREM

A0A5A7VBD1 VQ motif-containing protein 1-like1.1e-1573.91Show/hide
Query:  STRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMRDSSFKEFQRVLREMAK
        STRVVIIDTKYV TDAKSFKTVVQKLTGKD   A  E+ R   G + +SSL+RDSSFKEFQRVLREM +
Subjt:  STRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMRDSSFKEFQRVLREMAK

A0A6J1CNV7 VQ motif-containing protein 10-like2.4e-2898.61Show/hide
Query:  EAPSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMRDSSFKEFQRVLREMAK
        EAPSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSL RDSSFKEFQRVLREMAK
Subjt:  EAPSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMRDSSFKEFQRVLREMAK

A0A6J1FVF7 VQ motif-containing protein 11.2e-1474.29Show/hide
Query:  EAPSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMRDSSFKEFQRVLREM
        EA STRVVIIDTKYVHTDAKSFKTVVQKLTGKDP  A EE+R++ GG S S  ++ DSSFK+FQ  LREM
Subjt:  EAPSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMRDSSFKEFQRVLREM

SwissProt top hitse value%identityAlignment
Q1G3U8 VQ motif-containing protein 12.4e-0450.98Show/hide
Query:  RVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMR
        +VV I+T+YV TDA+SFKT+VQ+LTGK+   A      SG G  G  S  R
Subjt:  RVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMR

Q8VYI5 VQ motif-containing protein 108.1e-0539.53Show/hide
Query:  RVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAA---------------------EEDRRSGGGGSGSSSLMRDSSFKEFQRVLREM
        +VV I+T+YV TDA+SFKTVVQ+LTGK+   AA                     E+ R+  GGG G     R  +  EF R+ +EM
Subjt:  RVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAA---------------------EEDRRSGGGGSGSSSLMRDSSFKEFQRVLREM

Arabidopsis top hitse value%identityAlignment
AT1G17147.1 VQ motif-containing protein1.7e-0550.98Show/hide
Query:  RVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMR
        +VV I+T+YV TDA+SFKT+VQ+LTGK+   A      SG G  G  S  R
Subjt:  RVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMR

AT1G78410.1 VQ motif-containing protein5.8e-0639.53Show/hide
Query:  RVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAA---------------------EEDRRSGGGGSGSSSLMRDSSFKEFQRVLREM
        +VV I+T+YV TDA+SFKTVVQ+LTGK+   AA                     E+ R+  GGG G     R  +  EF R+ +EM
Subjt:  RVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAA---------------------EEDRRSGGGGSGSSSLMRDSSFKEFQRVLREM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAGCTCCTTCCACTAGGGTTGTGATTATTGACACCAAATATGTGCACACCGATGCCAAGAGCTTCAAGACGGTGGTGCAGAAGCTGACCGGGAAGGATCCGGCAGCAGC
AGCGGAGGAGGACAGACGTAGCGGCGGTGGCGGGAGCGGGAGCTCGAGTCTTATGAGAGACTCGTCGTTTAAGGAGTTCCAGAGAGTGCTGCGAGAGATGGCCAAG
mRNA sequenceShow/hide mRNA sequence
GAAGCTCCTTCCACTAGGGTTGTGATTATTGACACCAAATATGTGCACACCGATGCCAAGAGCTTCAAGACGGTGGTGCAGAAGCTGACCGGGAAGGATCCGGCAGCAGC
AGCGGAGGAGGACAGACGTAGCGGCGGTGGCGGGAGCGGGAGCTCGAGTCTTATGAGAGACTCGTCGTTTAAGGAGTTCCAGAGAGTGCTGCGAGAGATGGCCAAG
Protein sequenceShow/hide protein sequence
EAPSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPAAAAEEDRRSGGGGSGSSSLMRDSSFKEFQRVLREMAK