CuGenDBv2

Gene ID	MS002844
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	photosystem I subunit O
Genome location	scaffold359:156591..157633
RNA-Seq Expression	MS002844
Synteny	MS002844
Gene Ontology terms	GO:0009767 - photosynthetic electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003729 - mRNA binding (molecular function)
InterPro domains	IPR017498 - Photosystem I PsaO

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004139499.1 photosystem I subunit O [Cucumis sativus]

1.7e-67

89.86

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Query:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG
        MATAFATSS + GLG ++SLSSPSSRSPRL S F+K PVAARNPLSVA ASGG+FTCFERDWLRRDLNVIGFGLIGW+APSSIPVI+GKSLTGLFFESIG
Subjt:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK
        AELAHFPSPPALTSQFWLWL+TWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK

XP_008463649.1 PREDICTED: photosystem I subunit O [Cucumis melo]

1.3e-67

89.86

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Query:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG
        MATAFATSS + GLG ++SLSSPSSRSPRL S F+KSPVAARNPL+V RAS GRFTCFERDWLRRDLNVIGFGLIGW+APSSIPVINGKSLTGLFFESIG
Subjt:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK
         ELAHFPSPPALTSQFWLWL+TWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK

XP_022142590.1 photosystem I subunit O [Momordica charantia]

2.7e-76

99.32

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Query:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG
        MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSP AARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG
Subjt:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK
        AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK

XP_022973174.1 photosystem I subunit O [Cucurbita maxima]

1.3e-67

87.84

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Query:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG
        MA+AFATSS++VGLG SSSLSSPSSRSPRL S F+K PV ARNP  VAR+ GGRFTCF+RDWLRRDLNVIGFGLIGW+APSSIPVI+GKSLTGLFFESIG
Subjt:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK
        AELAHFPSPPALTSQFWLWL+TWHLGLFITLTFGQIGFKGRTEDYF K
Subjt:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK

XP_038895620.1 photosystem I subunit O [Benincasa hispida]

6.4e-70

91.22

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Query:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG
        MATAFATSS++VGLG ++SLSSPSSRSPRL S FVK PV ARNP +VARASGGRFTCFERDWLRRDLNVIGFGLIGW+APSSIPVINGKSLTGLFFESIG
Subjt:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK
        AELAHFPSPPALTSQFWLWL+TWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LT61 Uncharacterized protein

8.4e-68

89.86

Show/hide

Query:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG
        MATAFATSS + GLG ++SLSSPSSRSPRL S F+K PVAARNPLSVA ASGG+FTCFERDWLRRDLNVIGFGLIGW+APSSIPVI+GKSLTGLFFESIG
Subjt:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK
        AELAHFPSPPALTSQFWLWL+TWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK

A0A1S3CJR4 photosystem I subunit O

6.4e-68

89.86

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Query:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG
        MATAFATSS + GLG ++SLSSPSSRSPRL S F+KSPVAARNPL+V RAS GRFTCFERDWLRRDLNVIGFGLIGW+APSSIPVINGKSLTGLFFESIG
Subjt:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK
         ELAHFPSPPALTSQFWLWL+TWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK

A0A6J1CLD0 photosystem I subunit O

1.3e-76

99.32

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Query:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG
        MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSP AARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG
Subjt:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK
        AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK

A0A6J1EID2 photosystem I subunit O

2.1e-66

86.49

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Query:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG
        MA+AFATSS++VGLG SSSLSSPSSRSPRL S FVK PV ARNP  V R+ GGR TCF+RDWLRRDLNVIGFGLIGW+APSSIPVI+GKSLTGLFFESIG
Subjt:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK
         ELAHFPSPPALTSQFWLWL+TWHLGLFITLTFGQIGFKGRTEDYF K
Subjt:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK

A0A6J1IDS7 photosystem I subunit O

6.4e-68

87.84

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Query:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG
        MA+AFATSS++VGLG SSSLSSPSSRSPRL S F+K PV ARNP  VAR+ GGRFTCF+RDWLRRDLNVIGFGLIGW+APSSIPVI+GKSLTGLFFESIG
Subjt:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK
        AELAHFPSPPALTSQFWLWL+TWHLGLFITLTFGQIGFKGRTEDYF K
Subjt:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK

SwissProt top hits

e value

%identity

Alignment

Q949Q5 Photosystem I subunit O

1.2e-58

75.34

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Query:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG
        MA  FAT ST++GLG SS  + P S S      F+K  ++A+NPL +A ASGGR TCFER+WLRRDLNV+GFGLIGWLAPSSIP INGKSLTGLFF+SIG
Subjt:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYF
         ELAHFP+PPALTSQFWLWLVTWHLGLF+ LTFGQIGFKGRTEDYF
Subjt:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYF

Arabidopsis top hits

e value

%identity

Alignment

AT1G08380.1 photosystem I subunit O

8.3e-60

75.34

Show/hide

Query:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG
        MA  FAT ST++GLG SS  + P S S      F+K  ++A+NPL +A ASGGR TCFER+WLRRDLNV+GFGLIGWLAPSSIP INGKSLTGLFF+SIG
Subjt:  MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYF
         ELAHFP+PPALTSQFWLWLVTWHLGLF+ LTFGQIGFKGRTEDYF
Subjt:  AELAHFPSPPALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYF

Sequences

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CDS sequence

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ATGGCGACCGCTTTCGCTACCTCCTCAACCATCGTCGGCCTCGGAAGAAGCTCCTCTCTCTCCTCTCCTTCTTCCAGATCTCCGCGCCTCGCCTCCGTGTTCGTCAAATC
GCCGGTGGCAGCGAGGAATCCACTCAGCGTTGCGCGCGCATCCGGTGGAAGGTTCACGTGCTTTGAAAGAGACTGGCTGCGGAGAGATCTGAATGTGATCGGATTCGGAC
TGATCGGATGGCTGGCGCCGTCGAGCATTCCGGTGATCAACGGAAAGAGCTTGACGGGGCTCTTCTTTGAGAGCATCGGAGCAGAGCTTGCCCACTTCCCTTCTCCACCC
GCTCTCACCTCTCAGTTCTGGTTGTGGCTGGTGACGTGGCACTTGGGGCTGTTCATAACGCTTACATTTGGACAAATTGGGTTCAAGGGAAGGACCGAAGACTACTTTTC
AAAG

mRNA sequence

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Protein sequence

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MATAFATSSTIVGLGRSSSLSSPSSRSPRLASVFVKSPVAARNPLSVARASGGRFTCFERDWLRRDLNVIGFGLIGWLAPSSIPVINGKSLTGLFFESIGAELAHFPSPP
ALTSQFWLWLVTWHLGLFITLTFGQIGFKGRTEDYFSK

MS002844 (gene) of Bitter gourd (TR) v1 genome