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MS002852 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002852
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTranscription repressor
Genome locationscaffold359:217242..217781
RNA-Seq ExpressionMS002852
SyntenyMS002852
Gene Ontology termsGO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR006458 - Ovate protein family, C-terminal
IPR038933 - Ovate protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583701.1 Transcription repressor OFP6, partial [Cucurbita argyrosperma subsp. sororia]5.6e-4466.06Show/hide
Query:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAG---HNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSII
        MSN +KKKF  SIF+PT AGCGGCGKPK SDIVEPD K + A      H+PK R SSSSSG +NGG+SL+DEDCTS+T +T     +  P   +I  S I
Subjt:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAG---HNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSII

Query:  AVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSH
        A+EKNSD+PY+DFR S+L+MIIEKKIYST GLQELLNCFL LNSP+HHEIIV+AFTE+ +EF SH
Subjt:  AVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSH

KAG7019349.1 Transcription repressor OFP6, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-4466.06Show/hide
Query:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAG---HNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSII
        MSN +KKKF  SIF+PT AGCGGCGKPK SDIVEPD K + A      H+PK R SSSSSG +NGG+SL+DEDCTS+T +T     +  P   +I  S I
Subjt:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAG---HNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSII

Query:  AVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSH
        A+EKNSD+PY+DFR S+L+MIIEKKIYST GLQELLNCFL LNSP+HHEIIV+AFTE+ +EF SH
Subjt:  AVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSH

XP_022142613.1 transcription repressor OFP6-like [Momordica charantia]2.0e-9499.44Show/hide
Query:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAGHNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSIIAVE
        MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAGHNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSIIAVE
Subjt:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAGHNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSIIAVE

Query:  KNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSHSHRISDNSGRKPPSAGEG
        KNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSHSH ISDNSGRKPPSAGEG
Subjt:  KNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSHSHRISDNSGRKPPSAGEG

XP_022973166.1 transcription repressor OFP6 [Cucurbita maxima]3.2e-3961.82Show/hide
Query:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAG---HNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSII
        MSN + KKF  SIF+PT AGCGGCGKPK SDIVEPD K + A      H+PK R SSSSS  +NGG+SL+DEDC+S+T +T     +  P   +I  S I
Subjt:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAG---HNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSII

Query:  AVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSH
        A+EKNS++PY DFR S+L+MIIEK+IYST G QELLNCFL LNS +HHEIIV+AFTE+ +EF SH
Subjt:  AVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSH

XP_038877231.1 transcription repressor OFP6-like [Benincasa hispida]4.3e-4461.88Show/hide
Query:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAGHNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSIIAVE
        MSN +KKKF  SIF+ T +GCGGC KPK SD+VEP+ KP+          RSSS+SS DRNGG+SL+DEDC+S+T +T     +  P T  IG   IAVE
Subjt:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAGHNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSIIAVE

Query:  KNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSHS-HRISDNSGRKPPSAGEG
        K+SD+PYEDF  SM+QMI+EK+IYS  GLQELLNCFLHLNSP+HHEII+KAFT I +EF  H    IS+N+ RKPPSAGEG
Subjt:  KNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSHS-HRISDNSGRKPPSAGEG

TrEMBL top hitse value%identityAlignment
A0A0A0LSS9 Transcription repressor7.6e-3959.02Show/hide
Query:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAGHNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSIIAVE
        MSN +K KF  +IF+ T AGCGGC KPK SDIV+PD KP           RSSSSSS D+NG  SL DED TSS + +      +  P   + G  IAVE
Subjt:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAGHNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSIIAVE

Query:  KNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSHSHRI---SDNSGRKPPSAGEG
        K+SDDPYEDFR SM++MI+EK+IYS  GLQELLNCFLHLNSP+HHEIIVKAFT+I +EF S SHR+   S+N+  K  S GEG
Subjt:  KNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSHSHRI---SDNSGRKPPSAGEG

A0A1S3CK77 Transcription repressor7.2e-3758.47Show/hide
Query:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAGHNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSIIAVE
        MSN +K KF  +IF+ T AGCG C KPK SDIV+P+ KP           RSSSSSS D NG  SL DED +S++ +T      S  P   +    IAVE
Subjt:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAGHNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSIIAVE

Query:  KNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSHSHR---ISDNSGRKPPSAGEG
        K+SDDPYEDFR SM+QMI+EK+IYS  GLQELLNCFLHLNSP+HHEII+KAFT+I +EF S SHR   IS+++  KP SAGEG
Subjt:  KNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSHSHR---ISDNSGRKPPSAGEG

A0A5A7T2H1 Transcription repressor7.2e-3758.47Show/hide
Query:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAGHNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSIIAVE
        MSN +K KF  +IF+ T AGCG C KPK SDIV+P+ KP           RSSSSSS D NG  SL DED +S++ +T      S  P   +    IAVE
Subjt:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAGHNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSIIAVE

Query:  KNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSHSHR---ISDNSGRKPPSAGEG
        K+SDDPYEDFR SM+QMI+EK+IYS  GLQELLNCFLHLNSP+HHEII+KAFT+I +EF S SHR   IS+++  KP SAGEG
Subjt:  KNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSHSHR---ISDNSGRKPPSAGEG

A0A6J1CNP4 Transcription repressor9.8e-9599.44Show/hide
Query:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAGHNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSIIAVE
        MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAGHNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSIIAVE
Subjt:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAGHNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSIIAVE

Query:  KNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSHSHRISDNSGRKPPSAGEG
        KNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSHSH ISDNSGRKPPSAGEG
Subjt:  KNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSHSHRISDNSGRKPPSAGEG

A0A6J1I7Y0 Transcription repressor1.5e-3961.82Show/hide
Query:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAG---HNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSII
        MSN + KKF  SIF+PT AGCGGCGKPK SDIVEPD K + A      H+PK R SSSSS  +NGG+SL+DEDC+S+T +T     +  P   +I  S I
Subjt:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAG---HNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSII

Query:  AVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSH
        A+EKNS++PY DFR S+L+MIIEK+IYST G QELLNCFL LNS +HHEIIV+AFTE+ +EF SH
Subjt:  AVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSH

SwissProt top hitse value%identityAlignment
F4HNU8 Transcription repressor OFP46.1e-0942.19Show/hide
Query:  AVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMS
        AV K+S DP +DFR+SM++MI E  I ++  +++LL C+L LN   +H++I+K F ++W E ++
Subjt:  AVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMS

Q3E9B4 Transcription repressor OFP81.8e-1356.25Show/hide
Query:  AVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMS
        AV K S DPYEDFR SM++MI+E++I++ A LQ+LL CFL LNS  HH++IV+ F EI+    S
Subjt:  AVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMS

Q3EAL1 Transcription repressor OFP65.5e-1839.75Show/hide
Query:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAGHNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSIIAVE
        M+   KKK  K++ +     CG C KP  + I    +K          KP+  SS+              C SS ++       + P +T +  + +AVE
Subjt:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAGHNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSIIAVE

Query:  KNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMS
        K+SDDPY DFR SMLQMI+E +IYS   L+ELL CFL LNS +HH IIV+AF+EIW++  S
Subjt:  KNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMS

Q94CV1 Transcription repressor OFP83.8e-1136.79Show/hide
Query:  RSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSIIAVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVK
        R + ++S  R G +   D++            L    P   +    +AV   S +PYEDFR+SM+QM++EK+IY+   L +LL+ FL LNSP HH +I+ 
Subjt:  RSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSIIAVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVK

Query:  AFTEIW
        AF ++W
Subjt:  AFTEIW

Q9ZU65 Transcription repressor OFP74.3e-1558.33Show/hide
Query:  IAVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIW
        +AV K S+DPYEDF+ SM++MI+EKK++  A L++LL+CFL LN+  HH  IV+AF+EIW
Subjt:  IAVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIW

Arabidopsis top hitse value%identityAlignment
AT1G06920.1 ovate family protein 44.3e-1042.19Show/hide
Query:  AVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMS
        AV K+S DP +DFR+SM++MI E  I ++  +++LL C+L LN   +H++I+K F ++W E ++
Subjt:  AVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMS

AT2G18500.1 ovate family protein 73.1e-1658.33Show/hide
Query:  IAVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIW
        +AV K S+DPYEDF+ SM++MI+EKK++  A L++LL+CFL LN+  HH  IV+AF+EIW
Subjt:  IAVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIW

AT2G36026.1 Ovate family protein2.6e-2341.38Show/hide
Query:  KKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAGHNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSP----------PPTTTIGG
        KKKK      +    GCG C  P  S    P  K          KPR  SS+ G            C SST TT S     P            + T   
Subjt:  KKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAGHNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSP----------PPTTTIGG

Query:  SIIAVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSHSHRISD
        + +AVEK+SDDPY DFR SMLQMI+E +IYS   L+ELL+CFL LN P+HH II++AF+EIWD   S + R  D
Subjt:  SIIAVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSHSHRISD

AT3G52525.1 ovate family protein 63.9e-1939.75Show/hide
Query:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAGHNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSIIAVE
        M+   KKK  K++ +     CG C KP  + I    +K          KP+  SS+              C SS ++       + P +T +  + +AVE
Subjt:  MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAGHNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSIIAVE

Query:  KNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMS
        K+SDDPY DFR SMLQMI+E +IYS   L+ELL CFL LNS +HH IIV+AF+EIW++  S
Subjt:  KNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMS

AT5G19650.1 ovate family protein 81.3e-1456.25Show/hide
Query:  AVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMS
        AV K S DPYEDFR SM++MI+E++I++ A LQ+LL CFL LNS  HH++IV+ F EI+    S
Subjt:  AVEKNSDDPYEDFRDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAATTTCAAGAAGAAGAAATTTCCCAAATCCATTTTTGCCCCCACCGCAGCCGGCTGCGGCGGCTGCGGGAAGCCGAAACCCTCCGATATCGTCGAGCCCGATGC
GAAGCCCTCCGGCGCCGGCGCCGGCCACAACCCAAAACCCAGATCCTCATCTTCCAGCTCCGGCGACCGGAACGGCGGCATCTCTCTCGAAGACGAAGACTGCACCTCTT
CCACCACCACCACCATCTCCGGACTCCTCCTCAGCCCGCCGCCGACGACCACGATCGGCGGCAGCATCATTGCCGTCGAGAAGAATTCCGACGACCCATATGAGGATTTC
CGGGACTCGATGCTCCAGATGATAATCGAGAAGAAGATTTACTCCACCGCCGGCCTCCAAGAGCTTCTCAATTGCTTCCTCCATCTGAATTCTCCGTTCCACCATGAAAT
TATCGTCAAAGCTTTCACCGAGATTTGGGATGAGTTCATGTCCCACAGCCACCGGATCTCCGATAATTCTGGCCGGAAACCGCCGTCCGCCGGTGAAGGT
mRNA sequenceShow/hide mRNA sequence
ATGTCTAATTTCAAGAAGAAGAAATTTCCCAAATCCATTTTTGCCCCCACCGCAGCCGGCTGCGGCGGCTGCGGGAAGCCGAAACCCTCCGATATCGTCGAGCCCGATGC
GAAGCCCTCCGGCGCCGGCGCCGGCCACAACCCAAAACCCAGATCCTCATCTTCCAGCTCCGGCGACCGGAACGGCGGCATCTCTCTCGAAGACGAAGACTGCACCTCTT
CCACCACCACCACCATCTCCGGACTCCTCCTCAGCCCGCCGCCGACGACCACGATCGGCGGCAGCATCATTGCCGTCGAGAAGAATTCCGACGACCCATATGAGGATTTC
CGGGACTCGATGCTCCAGATGATAATCGAGAAGAAGATTTACTCCACCGCCGGCCTCCAAGAGCTTCTCAATTGCTTCCTCCATCTGAATTCTCCGTTCCACCATGAAAT
TATCGTCAAAGCTTTCACCGAGATTTGGGATGAGTTCATGTCCCACAGCCACCGGATCTCCGATAATTCTGGCCGGAAACCGCCGTCCGCCGGTGAAGGT
Protein sequenceShow/hide protein sequence
MSNFKKKKFPKSIFAPTAAGCGGCGKPKPSDIVEPDAKPSGAGAGHNPKPRSSSSSSGDRNGGISLEDEDCTSSTTTTISGLLLSPPPTTTIGGSIIAVEKNSDDPYEDF
RDSMLQMIIEKKIYSTAGLQELLNCFLHLNSPFHHEIIVKAFTEIWDEFMSHSHRISDNSGRKPPSAGEG