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MS002855 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002855
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein GL2-INTERACTING REPRESSOR 1
Genome locationscaffold359:230407..230619
RNA-Seq ExpressionMS002855
SyntenyMS002855
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF0925540.1 hypothetical protein E2562_017151 [Oryza meyeriana var. granulata]5.3e-0650Show/hide
Query:  RSLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLD
        R LSSS    T   PS  V+S+ S ++GG    A+ M+L GC RC+MYVM S+ D +CPKC+ST +LD
Subjt:  RSLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLD
KAF8779370.1 hypothetical protein HU200_002637 [Digitaria exilis]6.9e-0654.41Show/hide
Query:  RSLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLD
        R LSSS    T   PS  V+S+ S +SGG   AA +M+L GC RC+MYVM S+ D RCPKC+ST +LD
Subjt:  RSLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLD
KAG6583700.1 hypothetical protein SDJN03_19632, partial [Cucurbita argyrosperma subsp. sororia]1.4e-0659.26Show/hide
Query:  SLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLDM
        S S+  + S+    DAT  + MVLLGCT+CLMYVMSSK DL+CPKCN+T++LD+
Subjt:  SLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLDM
XP_009786048.1 PREDICTED: uncharacterized protein LOC104234215 [Nicotiana sylvestris]2.0e-0552.7Show/hide
Query:  RSLSSSKPEPTPQDPSLSVASDDSADSGGDATA-----AAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLDM
        RSL++S   P    PS  V+SDDS  SGG   A     A +MVL+GC RCLMYVM ++ D RCPKC ST +LD+
Subjt:  RSLSSSKPEPTPQDPSLSVASDDSADSGGDATA-----AAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLDM
XP_040380465.1 protein GL2-INTERACTING REPRESSOR 1-like [Oryza brachyantha]5.3e-0650.75Show/hide
Query:  SLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLD
        S SSS    TP  PS  V+S+ S ++GG    A+ M+L GC RC+MYVM S+ D +CPKC+ST +LD
Subjt:  SLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLD
TrEMBL top hitse value%identityAlignment
A0A0A9IUP6 Uncharacterized protein1.5e-0651.47Show/hide
Query:  RSLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLD
        R LSSS    T   PS  V+S+ S ++GG    A +M+L GC RC+MYVM S+ D RCPKC+ST +LD
Subjt:  RSLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLD
A0A1S4D6R1 uncharacterized protein LOC1078265209.8e-0652.7Show/hide
Query:  RSLSSSKPEPTPQDPSLSVASDDSADSGGDATA-----AAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLDM
        RSL++S   P    PS  V+SDDS  SGG   A     A +MVL+GC RCLMYVM ++ D RCPKC ST +LD+
Subjt:  RSLSSSKPEPTPQDPSLSVASDDSADSGGDATA-----AAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLDM
A0A368QI79 Uncharacterized protein9.8e-0652.94Show/hide
Query:  RSLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLD
        R LSSS    T   PS  V+S+ S ++GG   A A M+L GC RC+MYVM S+ D RCPKC+ST +LD
Subjt:  RSLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLD
A0A6G1EL36 Uncharacterized protein2.6e-0650Show/hide
Query:  RSLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLD
        R LSSS    T   PS  V+S+ S ++GG    A+ M+L GC RC+MYVM S+ D +CPKC+ST +LD
Subjt:  RSLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLD
J3M7M2 Uncharacterized protein2.6e-0650.75Show/hide
Query:  SLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLD
        S SSS    TP  PS  V+S+ S ++GG    A+ M+L GC RC+MYVM S+ D +CPKC+ST +LD
Subjt:  SLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLD
SwissProt top hitse value%identityAlignment
Q9FNI1 Protein GL2-INTERACTING REPRESSOR 16.1e-0541.18Show/hide
Query:  RSLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLD
        RS ++S   P     S  +  D+ +     +    +MVL+GC RCLMYVM S+ D +CPKC ST +LD
Subjt:  RSLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLD
Q9SRN4 Protein GL2-INTERACTING REPRESSOR 21.0e-0444.78Show/hide
Query:  SLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLD
        SL  S        PS  V+S+ + +     T   +MVL+GC RCLMYVM S  D +CPKC ST +LD
Subjt:  SLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLD
Arabidopsis top hitse value%identityAlignment
AT3G11600.1 unknown protein7.4e-0644.78Show/hide
Query:  SLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLD
        SL  S        PS  V+S+ + +     T   +MVL+GC RCLMYVM S  D +CPKC ST +LD
Subjt:  SLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLD
AT5G06270.1 unknown protein4.3e-0641.18Show/hide
Query:  RSLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLD
        RS ++S   P     S  +  D+ +     +    +MVL+GC RCLMYVM S+ D +CPKC ST +LD
Subjt:  RSLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLD
AT5G22270.1 unknown protein8.2e-0540.35Show/hide
Query:  QDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSS-KLDLRCPKCNSTSVLD
        +  S S+ S+++   GG+   A +MV++GC  C+MY+++S + D RCP+CNS  +LD
Subjt:  QDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSS-KLDLRCPKCNSTSVLD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGAAGCCTCAGCAGCTCGAAGCCCGAACCGACACCGCAAGATCCGTCTCTTTCGGTGGCGTCGGATGACTCGGCAGATAGCGGTGGAGACGCAACGGCGGCTGC
GGCCATGGTGCTGTTGGGATGCACTCGGTGTCTCATGTACGTCATGTCGTCTAAGTTAGATCTCAGGTGTCCCAAATGCAACAGCACCTCCGTGCTCGACATG
mRNA sequenceShow/hide mRNA sequence
ATGGGTCGAAGCCTCAGCAGCTCGAAGCCCGAACCGACACCGCAAGATCCGTCTCTTTCGGTGGCGTCGGATGACTCGGCAGATAGCGGTGGAGACGCAACGGCGGCTGC
GGCCATGGTGCTGTTGGGATGCACTCGGTGTCTCATGTACGTCATGTCGTCTAAGTTAGATCTCAGGTGTCCCAAATGCAACAGCACCTCCGTGCTCGACATG
Protein sequenceShow/hide protein sequence
MGRSLSSSKPEPTPQDPSLSVASDDSADSGGDATAAAAMVLLGCTRCLMYVMSSKLDLRCPKCNSTSVLDM