; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002856 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002856
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionnuclear speckle splicing regulatory protein 1-like
Genome locationscaffold359:232221..235362
RNA-Seq ExpressionMS002856
SyntenyMS002856
Gene Ontology termsNA
InterPro domainsIPR018612 - Domain of unknown function DUF2040


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152856.1 nuclear speckle splicing regulatory protein 1 [Cucumis sativus]7.6e-12981.11Show/hide
Query:  MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQN
        MSKYGLQLRVKPSQQKQPTRPPLP  LGFQDDDD+DVEREISRQA+KNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKE++VQPRA+DREERKPKYIQN
Subjt:  MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQN

Query:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK
        LMKKA+EREREQEIIYERKLAKERSK+DHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSD+SDFYF+LQKN+A+GA NA++   PPK
Subjt:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK

Query:  QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEEHP--EEDFLVSNKTTPSDV---SPPSLHDKTSVQEQPKHGQGEQQPKRDHH
        +LQ E++EK +EV  LEKHEES N DT N+    + SNLPS S K +EEHP  EE    SNKTTPS++   SPP+LHDKT VQEQPKH Q EQ PK DHH
Subjt:  QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEEHP--EEDFLVSNKTTPSDV---SPPSLHDKTSVQEQPKHGQGEQQPKRDHH

Query:  KRSEDAVTAAKERFLARKRAKDV
        KR+EDAV AAKERFLARKRAK+V
Subjt:  KRSEDAVTAAKERFLARKRAKDV

XP_022142663.1 nuclear speckle splicing regulatory protein 1-like [Momordica charantia]1.5e-164100Show/hide
Query:  MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQN
        MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQN
Subjt:  MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQN

Query:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK
        LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK
Subjt:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK

Query:  QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEEHPEEDFLVSNKTTPSDVSPPSLHDKTSVQEQPKHGQGEQQPKRDHHKRSED
        QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEEHPEEDFLVSNKTTPSDVSPPSLHDKTSVQEQPKHGQGEQQPKRDHHKRSED
Subjt:  QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEEHPEEDFLVSNKTTPSDVSPPSLHDKTSVQEQPKHGQGEQQPKRDHHKRSED

Query:  AVTAAKERFLARKRAKDV
        AVTAAKERFLARKRAKDV
Subjt:  AVTAAKERFLARKRAKDV

XP_022927406.1 nuclear speckle splicing regulatory protein 1-like [Cucurbita moschata]1.0e-12881.42Show/hide
Query:  MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQN
        MSKYGLQLRVKPSQQKQPTRPPLP  LGFQDDDD+DVEREISRQA+KNKALKDIEEQHKKAL EDPSVFDYDGVYDEMKE+ V PRA+DREERKPKYIQN
Subjt:  MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQN

Query:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK
        LMKKAKEREREQE+IYERKLAKERSK+DHLYAGKDKFVT AYKKKLAEQAKWMEEERLRQLREEK+DVTKKSDISDFYFNLQKNIA+GA NAV+ REPP+
Subjt:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK

Query:  QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEE--HPEEDFLVSNKTTPSDV---SPPSLHDKTSVQEQPKHGQGEQQPKRDHH
        +LQSE+Q   +EV++L+KHEESANAD  N+ QS K  + PSQSAK +E+  H EE    SNKTTPSDV   SPP LH++T V++QP+H QGEQQPKRDHH
Subjt:  QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEE--HPEEDFLVSNKTTPSDV---SPPSLHDKTSVQEQPKHGQGEQQPKRDHH

Query:  KRSEDAVTAAKERFLARKRAKDV
        KRSEDAV AAKERFLARKR K+V
Subjt:  KRSEDAVTAAKERFLARKRAKDV

XP_023520694.1 nuclear speckle splicing regulatory protein 1-like [Cucurbita pepo subsp. pepo]1.3e-12881.42Show/hide
Query:  MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQN
        MSKYGLQLRVKPSQQKQPTRPPLP  LGFQDDDD+DVEREISRQA+KNKALKDIEEQHKKAL EDPSVFDYDGVYDEMKE+ V PRA+DREERKPKYIQN
Subjt:  MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQN

Query:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK
        LMKKAKEREREQE+IYERKLAKERSK+DHLYAGKDKFVT AYKKKLAEQAKWMEEERLRQLREEK+DVTKKSDISDFYFNLQKNIA+GA NAV+ REPP+
Subjt:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK

Query:  QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEE--HPEEDFLVSNKTTPSDV---SPPSLHDKTSVQEQPKHGQGEQQPKRDHH
        +LQSE+Q   +EV++L+KHEES NAD  N+ QS K  + PSQSAK +E+  H EE    SNKTTPSDV   SPP LH+KT V++QP+H QGEQQPKRDHH
Subjt:  QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEE--HPEEDFLVSNKTTPSDV---SPPSLHDKTSVQEQPKHGQGEQQPKRDHH

Query:  KRSEDAVTAAKERFLARKRAKDV
        KRSEDAV AAKERFLARKR K+V
Subjt:  KRSEDAVTAAKERFLARKRAKDV

XP_038877232.1 nuclear speckle splicing regulatory protein 1-like [Benincasa hispida]9.6e-13282.92Show/hide
Query:  MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQN
        MSKYGLQLRVKPSQQKQPTRPPLP  LGFQDDDD+DVEREISRQA+KNKALKDIE+QH+KALEEDPSVFDYDGVYD+MKE+ VQPRA+DREERKPKYIQN
Subjt:  MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQN

Query:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK
        LMKKA+EREREQEIIYERKLAKERSK+DHLYAGKDKFVT AYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDI+DFYFNLQKNIA+GA NA++ REPP 
Subjt:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK

Query:  QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEEHP--EEDFLVSNKTTPSDV---SPPSLHDKTSVQEQPKHGQGEQQPKRDHH
        +L SE+QEK +EV   EKHEE ANADT N+ QS K SNLPSQSAK  EEHP  EE   VSNKTTPSDV   SP ++ +KT V+EQPKH QGEQQPKRDHH
Subjt:  QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEEHP--EEDFLVSNKTTPSDV---SPPSLHDKTSVQEQPKHGQGEQQPKRDHH

Query:  KRSEDAVTAAKERFLARKRAKD
        KR+EDAV AAKERFLARKRAK+
Subjt:  KRSEDAVTAAKERFLARKRAKD

TrEMBL top hitse value%identityAlignment
A0A0A0LJE9 DUF2040 domain-containing protein3.7e-12981.11Show/hide
Query:  MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQN
        MSKYGLQLRVKPSQQKQPTRPPLP  LGFQDDDD+DVEREISRQA+KNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKE++VQPRA+DREERKPKYIQN
Subjt:  MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQN

Query:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK
        LMKKA+EREREQEIIYERKLAKERSK+DHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSD+SDFYF+LQKN+A+GA NA++   PPK
Subjt:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK

Query:  QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEEHP--EEDFLVSNKTTPSDV---SPPSLHDKTSVQEQPKHGQGEQQPKRDHH
        +LQ E++EK +EV  LEKHEES N DT N+    + SNLPS S K +EEHP  EE    SNKTTPS++   SPP+LHDKT VQEQPKH Q EQ PK DHH
Subjt:  QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEEHP--EEDFLVSNKTTPSDV---SPPSLHDKTSVQEQPKHGQGEQQPKRDHH

Query:  KRSEDAVTAAKERFLARKRAKDV
        KR+EDAV AAKERFLARKRAK+V
Subjt:  KRSEDAVTAAKERFLARKRAKDV

A0A1S4E1R3 nuclear speckle splicing regulatory protein 1-like isoform X22.3e-12378.33Show/hide
Query:  MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQN
        MSKYGLQLRVKPSQQKQP RPPLP  LGFQDDDD++VEREISRQA+KNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKE+ VQPRA+DREERKPKYIQN
Subjt:  MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQN

Query:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK
        LMKKA+EREREQEIIYERKLAKERSK+DHLYAGKDKFVT AYKKKLAEQAKWMEEERLRQLREEKEDVTKKSD+SDFYF+LQKN+A+GA NA++ R  PK
Subjt:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK

Query:  QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEEHP--EEDFLVSNKTTPSDV---SPPSLHDKTSVQEQPKHGQGEQQPKRDHH
        +LQ E++EK +EV  LEKHEES N DT N+ Q         Q++K +EEH   EE    SNKTTPSD+   SPP+LHDK  VQE+PKH   EQ PKRDHH
Subjt:  QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEEHP--EEDFLVSNKTTPSDV---SPPSLHDKTSVQEQPKHGQGEQQPKRDHH

Query:  KRSEDAVTAAKERFLARKRAKDV
        KR+EDAV AAKERFLARKRAK+V
Subjt:  KRSEDAVTAAKERFLARKRAKDV

A0A6J1CNT9 nuclear speckle splicing regulatory protein 1-like7.1e-165100Show/hide
Query:  MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQN
        MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQN
Subjt:  MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQN

Query:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK
        LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK
Subjt:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK

Query:  QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEEHPEEDFLVSNKTTPSDVSPPSLHDKTSVQEQPKHGQGEQQPKRDHHKRSED
        QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEEHPEEDFLVSNKTTPSDVSPPSLHDKTSVQEQPKHGQGEQQPKRDHHKRSED
Subjt:  QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEEHPEEDFLVSNKTTPSDVSPPSLHDKTSVQEQPKHGQGEQQPKRDHHKRSED

Query:  AVTAAKERFLARKRAKDV
        AVTAAKERFLARKRAKDV
Subjt:  AVTAAKERFLARKRAKDV

A0A6J1EHK7 nuclear speckle splicing regulatory protein 1-like4.8e-12981.42Show/hide
Query:  MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQN
        MSKYGLQLRVKPSQQKQPTRPPLP  LGFQDDDD+DVEREISRQA+KNKALKDIEEQHKKAL EDPSVFDYDGVYDEMKE+ V PRA+DREERKPKYIQN
Subjt:  MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQN

Query:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK
        LMKKAKEREREQE+IYERKLAKERSK+DHLYAGKDKFVT AYKKKLAEQAKWMEEERLRQLREEK+DVTKKSDISDFYFNLQKNIA+GA NAV+ REPP+
Subjt:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK

Query:  QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEE--HPEEDFLVSNKTTPSDV---SPPSLHDKTSVQEQPKHGQGEQQPKRDHH
        +LQSE+Q   +EV++L+KHEESANAD  N+ QS K  + PSQSAK +E+  H EE    SNKTTPSDV   SPP LH++T V++QP+H QGEQQPKRDHH
Subjt:  QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEE--HPEEDFLVSNKTTPSDV---SPPSLHDKTSVQEQPKHGQGEQQPKRDHH

Query:  KRSEDAVTAAKERFLARKRAKDV
        KRSEDAV AAKERFLARKR K+V
Subjt:  KRSEDAVTAAKERFLARKRAKDV

A0A6J1I6R6 nuclear speckle splicing regulatory protein 1-like5.3e-12880.8Show/hide
Query:  MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQN
        MSKYGLQLRVKPSQQKQPTRPPLP  LGFQDDDD+DVEREISRQA+KNKALKDIEEQHKKAL EDPSVFDYDGVYDEMKE+ V PRA+DREERKPKYIQN
Subjt:  MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQN

Query:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK
        LMKKAKEREREQE+IYERKLAKERSK+DHLYAGKDKFVT AYKKKLAEQAKWMEEERLRQLREEK+DVTKKSDISDFYFNLQKNIA+GA NAV+ REPP+
Subjt:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK

Query:  QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEE--HPEEDFLVSNKTTPSDV---SPPSLHDKTSVQEQPKHGQGEQQPKRDHH
        +LQSE+Q   ++V++++KH ESANAD  N+ QS K  + PSQSAK +E+  H EE    SNKTTPSDV   SPP LH+KT V++QP+H QGEQQPKRDHH
Subjt:  QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEE--HPEEDFLVSNKTTPSDV---SPPSLHDKTSVQEQPKHGQGEQQPKRDHH

Query:  KRSEDAVTAAKERFLARKRAKDV
        KRSEDAV AAKERFLARKR K+V
Subjt:  KRSEDAVTAAKERFLARKRAKDV

SwissProt top hitse value%identityAlignment
Q2KIC0 Nuclear speckle splicing regulatory protein 13.9e-1931.03Show/hide
Query:  KYGLQLRVKPSQQKQPT--RPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQ--PRAHDREERKPKYI
        +YGL L  K +QQ  P   +P +  +    DDD+  V   + R+A K +A+K  + + +KAL ED +V++YD +YDEM+++  +  P+    ++RKPKYI
Subjt:  KYGLQLRVKPSQQKQPT--RPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQ--PRAHDREERKPKYI

Query:  QNLMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAEN--AVKSR
         NL+K  + R++EQE   E+K+ +ER  E   +  K+ FVT AYKKKL E+A+  E ER     E + DVTK+ D+S FY +L  N A G E       R
Subjt:  QNLMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAEN--AVKSR

Query:  EPPKQLQSEEQEKHSEVRELE--------------KHEESANADTSNNSQSSKQSNLPSQSAKMVEEHPEEDFLVSNKTTPSDVSPPSLHDK----TSVQ
        E   +++ E+ + +S+    E              K EE+ +AD+  +++SS+   +         E   E     +K   +    PS  ++    T   
Subjt:  EPPKQLQSEEQEKHSEVRELE--------------KHEESANADTSNNSQSSKQSNLPSQSAKMVEEHPEEDFLVSNKTTPSDVSPPSLHDK----TSVQ

Query:  EQPKHGQGEQQPKRDHHKR
         +    +G ++ + +H +R
Subjt:  EQPKHGQGEQQPKRDHHKR

Q4FZU3 Nuclear speckle splicing regulatory protein 18.8e-1931.96Show/hide
Query:  KYGLQLRVKPSQQKQPTRPPLPPSL--GFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQ--PRAHDREERKPKYI
        +YGL   + P + +   R    PS+     DDD+  V   + R+A K +A++  + + +KAL ED +V++YD +YDEM+++  +  P+    ++RKPKYI
Subjt:  KYGLQLRVKPSQQKQPTRPPLPPSL--GFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQ--PRAHDREERKPKYI

Query:  QNLMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREP
         NL+K  + R++EQE   E+K+ +ER  E   +  K+ FVT AYKKKL E+A+  E E+     E + DVTK+ D+S FY +L  N A G E   KS   
Subjt:  QNLMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREP

Query:  PKQLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQS-AKMVEEHPEEDFLVSNKTTPSDVSPPSLHDKTSVQEQPKHGQGEQQPKRDHHKR
                     E R + K E+        NS++  Q N   QS  +  EE+P+ D   S+     D      H    V+ + +   G       HHK 
Subjt:  PKQLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQS-AKMVEEHPEEDFLVSNKTTPSDVSPPSLHDKTSVQEQPKHGQGEQQPKRDHHKR

Query:  SEDAVTAAKERFLARK
           + ++++E  L+ K
Subjt:  SEDAVTAAKERFLARK

Q568R1 Nuclear speckle splicing regulatory protein 11.7e-1728.95Show/hide
Query:  KYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQ--PRAHDREERKPKYIQN
        +YGL L  K + +  P     P   G   DD+  V   + ++A K K +K    + +KALEED +V++YD VYD+++++ ++   +    E++KPKYI  
Subjt:  KYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQ--PRAHDREERKPKYIQN

Query:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK
        L++  +ER++EQE   ERK+ KER  E   +A K+ FVT AY++KL E+ + +E E+     E   DV K+ D+S FY +   N   G E       P +
Subjt:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK

Query:  QLQSEEQEKHSEVRELEKHEESA----NADTSNNSQSSKQSNLPSQSAKMVEEHPEEDFLVSNKTTPSDVSPPSLHDKTSVQEQPKHGQGEQQPKRDHHK
          QSEE+   S   E     ES      ++  ++S   +    P+ S      H +  +   +  + SD       ++  ++E+    +   + K    +
Subjt:  QLQSEEQEKHSEVRELEKHEESA----NADTSNNSQSSKQSNLPSQSAKMVEEHPEEDFLVSNKTTPSDVSPPSLHDKTSVQEQPKHGQGEQQPKRDHHK

Query:  RSED
        R  D
Subjt:  RSED

Q5NCR9 Nuclear speckle splicing regulatory protein 19.4e-2134.15Show/hide
Query:  DDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQ--PRAHDREERKPKYIQNLMKKAKEREREQEIIYERKLAKERSKED
        DDD+  V   + R+A K +A+K  + + +KAL ED +V++YD VYDEM+++  +  P+    ++RKPKYI NL+K  + R++EQE   E+K+ +ER  E+
Subjt:  DDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQ--PRAHDREERKPKYIQNLMKKAKEREREQEIIYERKLAKERSKED

Query:  HLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKS--REPPKQLQSEEQEKHSEVRELEKHEESANAD
          +  K+ FVT AYKKKL E+A+  E E+     E   DVTK+ D+S FY +L  N A G E A KS  RE    ++ E+   + +             +
Subjt:  HLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKS--REPPKQLQSEEQEKHSEVRELEKHEESANAD

Query:  TSNNSQSSKQSNLPSQSAKMVEEHPEEDFLVSNKTTPSDVSPPSLHDKTSVQEQPKHGQGEQQPKRDHHKRSEDAVTAAKERFLARK
        T++ S+  +QS +  + A+  EE+P+ D    +++  S+      H   S  E    G   + PK  HHK    + ++++ER L  K
Subjt:  TSNNSQSSKQSNLPSQSAKMVEEHPEEDFLVSNKTTPSDVSPPSLHDKTSVQEQPKHGQGEQQPKRDHHKRSEDAVTAAKERFLARK

Q9H0G5 Nuclear speckle splicing regulatory protein 12.3e-1935.09Show/hide
Query:  KYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQ--PRAHDREERKPKYIQN
        +YGL L  K  Q     + P        DDD+  V   + R+A K +A+K  + + +KAL ED +V++YD +YDEM+++  +  P+    ++RKPKYI N
Subjt:  KYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQ--PRAHDREERKPKYIQN

Query:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK
        L+K  + R++EQE   E+K+ +ER  E   +  K+ FVT AYKKKL E+A+  E E+     E   DVTK+ D+S FY +L          AV   E PK
Subjt:  LMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPK

Query:  QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEEHPEEDFLVSNKTTPSD
              +E  S ++E EK    +N  +S N    ++  L  Q+   VEE+P+ D     K++  D
Subjt:  QLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEEHPEEDFLVSNKTTPSD

Arabidopsis top hitse value%identityAlignment
AT1G55928.1 Coiled-coil domain-containing protein 55 (DUF2040)6.4e-4945.42Show/hide
Query:  MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREE-RKPKYIQ
        M+K+GLQLR   S++      P+ P LG +D++DNDV++EISRQA+K K+LK  EEQHKKALEEDP  F YD VYD+ K+    PR H+R+E  KP Y Q
Subjt:  MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREE-RKPKYIQ

Query:  NLMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPP
         + +KA  R++E+EI+YERKLAKER+KE HL+  + K VTG+YK+KL E+ +W+ EERLR+L EEK+DVTKK D+SDFYFN+ KN+AFGA + +K+RE  
Subjt:  NLMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPP

Query:  KQLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEEHPEEDFLVSNKTTPSDVSPP-SLHDKTSVQEQPK
        +  +  +  K  E+RE  K E        ++            S +++ E  E + + S +   SD +    L  K + + +P+
Subjt:  KQLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEEHPEEDFLVSNKTTPSDVSPP-SLHDKTSVQEQPK

AT2G27280.1 Coiled-coil domain-containing protein 55 (DUF2040)5.6e-6146.27Show/hide
Query:  MSKYGLQLRVKPSQQKQPTRPPL--PPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYI
        + KYGLQ+R  PSQ+KQ +  PL    S+  +DD++NDVE+EISRQA+K K+LK IE+QHKKA+EEDPS F YD VYD++K     PR  DREE K +YI
Subjt:  MSKYGLQLRVKPSQQKQPTRPPL--PPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYI

Query:  QNLMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREP
        Q++MK+A+ RE+E EI+YERKLAKER+K++HLY+ K+KFVTG +K+KL EQ KW+EEERLR+LREE++DVTKK+D+S+FY N+ KN+AFGA         
Subjt:  QNLMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREP

Query:  PKQLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEEHPEEDFLVSNKTTPSDVSPPS----LHDKTSVQEQPKHGQGEQQPKRDH
         + +++ E  +  E+R++++ EE    +T    +                           K+   +VSP S    L  K SV  +P+    +++ K   
Subjt:  PKQLQSEEQEKHSEVRELEKHEESANADTSNNSQSSKQSNLPSQSAKMVEEHPEEDFLVSNKTTPSDVSPPS----LHDKTSVQEQPKHGQGEQQPKRDH

Query:  HKRSEDAVTAAKERFLARKRAK
            EDA+  AKERFL+RK+AK
Subjt:  HKRSEDAVTAAKERFLARKRAK

AT2G27285.1 Coiled-coil domain-containing protein 55 (DUF2040)5.4e-7254.77Show/hide
Query:  MSKYGLQLRVKPSQQKQ-PTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQ
        M KYGLQ+R  PSQ+KQ  +RPPL P+  F +++D+DVE+EISRQATK KA K+IEEQHKKALEEDPS F YD VYD+MK++ V PR  DREERKP+YIQ
Subjt:  MSKYGLQLRVKPSQQKQ-PTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQ

Query:  NLMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPP
        NLMK+A+ RE+E EI+YERKLAKER K++HL++ K+KFVTGAYK+KL EQ KW+ EERLR+LREE++DVTKK D+SDFYFN+ KN+AFGA   V+++E  
Subjt:  NLMKKAKEREREQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPP

Query:  KQLQSEEQEKHSEVRELEKHEESANADT-------SNNSQSSKQSNLPSQSAKMVEEHPEEDFLVSNKTTPSDVSPPSLHDKTSVQEQPKHGQGEQQPKR
        K  +  + EK  E R+ EK EE     T       S   + S  S     S     E  E +  VS K   SD +      K+S++E  K     + PK 
Subjt:  KQLQSEEQEKHSEVRELEKHEESANADT-------SNNSQSSKQSNLPSQSAKMVEEHPEEDFLVSNKTTPSDVSPPSLHDKTSVQEQPKHGQGEQQPKR

Query:  -DHHKRSEDAVTAAKERFLARKRAK
         +  KR EDA+ AAKERFLARK+AK
Subjt:  -DHHKRSEDAVTAAKERFLARKRAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAAGTATGGCTTGCAGCTTAGGGTTAAGCCATCGCAGCAGAAGCAGCCTACAAGACCACCCCTTCCTCCTTCCCTGGGATTTCAAGATGATGATGATAATGATGT
CGAGAGAGAGATATCCCGCCAAGCTACTAAGAATAAGGCCCTTAAGGATATTGAGGAGCAACACAAGAAAGCATTAGAGGAGGATCCATCTGTTTTTGACTATGATGGTG
TCTATGATGAAATGAAAGAAAGGATGGTTCAACCTCGAGCACATGATCGTGAAGAGAGAAAGCCTAAGTACATCCAAAATTTGATGAAAAAGGCAAAAGAGCGAGAAAGG
GAGCAGGAGATCATATATGAAAGAAAACTGGCCAAGGAGAGAAGCAAAGAGGATCATCTTTATGCTGGTAAGGACAAATTCGTCACTGGTGCCTACAAAAAGAAACTTGC
AGAACAAGCTAAATGGATGGAGGAAGAGCGTCTCCGACAACTTCGGGAGGAGAAAGAGGATGTTACCAAAAAGAGCGACATTAGTGACTTTTACTTCAACCTTCAAAAGA
ATATTGCCTTTGGTGCCGAAAATGCAGTCAAGTCAAGGGAACCTCCCAAGCAGCTTCAGTCAGAGGAACAAGAGAAGCATTCTGAAGTCAGGGAATTGGAAAAGCATGAA
GAGAGTGCAAATGCTGATACGTCTAATAACTCTCAGTCTTCGAAACAATCCAATTTACCTTCCCAGTCTGCCAAGATGGTTGAAGAGCATCCTGAAGAAGACTTTTTGGT
TTCAAACAAAACAACACCATCTGATGTCAGCCCCCCTTCGTTACATGATAAAACCTCAGTTCAGGAGCAACCCAAGCACGGCCAAGGTGAACAACAACCAAAGCGCGACC
ATCATAAAAGAAGTGAAGATGCTGTCACTGCTGCAAAAGAGCGGTTTTTGGCTCGAAAAAGAGCCAAGGATGTG
mRNA sequenceShow/hide mRNA sequence
ATGAGCAAGTATGGCTTGCAGCTTAGGGTTAAGCCATCGCAGCAGAAGCAGCCTACAAGACCACCCCTTCCTCCTTCCCTGGGATTTCAAGATGATGATGATAATGATGT
CGAGAGAGAGATATCCCGCCAAGCTACTAAGAATAAGGCCCTTAAGGATATTGAGGAGCAACACAAGAAAGCATTAGAGGAGGATCCATCTGTTTTTGACTATGATGGTG
TCTATGATGAAATGAAAGAAAGGATGGTTCAACCTCGAGCACATGATCGTGAAGAGAGAAAGCCTAAGTACATCCAAAATTTGATGAAAAAGGCAAAAGAGCGAGAAAGG
GAGCAGGAGATCATATATGAAAGAAAACTGGCCAAGGAGAGAAGCAAAGAGGATCATCTTTATGCTGGTAAGGACAAATTCGTCACTGGTGCCTACAAAAAGAAACTTGC
AGAACAAGCTAAATGGATGGAGGAAGAGCGTCTCCGACAACTTCGGGAGGAGAAAGAGGATGTTACCAAAAAGAGCGACATTAGTGACTTTTACTTCAACCTTCAAAAGA
ATATTGCCTTTGGTGCCGAAAATGCAGTCAAGTCAAGGGAACCTCCCAAGCAGCTTCAGTCAGAGGAACAAGAGAAGCATTCTGAAGTCAGGGAATTGGAAAAGCATGAA
GAGAGTGCAAATGCTGATACGTCTAATAACTCTCAGTCTTCGAAACAATCCAATTTACCTTCCCAGTCTGCCAAGATGGTTGAAGAGCATCCTGAAGAAGACTTTTTGGT
TTCAAACAAAACAACACCATCTGATGTCAGCCCCCCTTCGTTACATGATAAAACCTCAGTTCAGGAGCAACCCAAGCACGGCCAAGGTGAACAACAACCAAAGCGCGACC
ATCATAAAAGAAGTGAAGATGCTGTCACTGCTGCAAAAGAGCGGTTTTTGGCTCGAAAAAGAGCCAAGGATGTG
Protein sequenceShow/hide protein sequence
MSKYGLQLRVKPSQQKQPTRPPLPPSLGFQDDDDNDVEREISRQATKNKALKDIEEQHKKALEEDPSVFDYDGVYDEMKERMVQPRAHDREERKPKYIQNLMKKAKERER
EQEIIYERKLAKERSKEDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDISDFYFNLQKNIAFGAENAVKSREPPKQLQSEEQEKHSEVRELEKHE
ESANADTSNNSQSSKQSNLPSQSAKMVEEHPEEDFLVSNKTTPSDVSPPSLHDKTSVQEQPKHGQGEQQPKRDHHKRSEDAVTAAKERFLARKRAKDV