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MS002858 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002858
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRegulatory particle non-ATPase 10
Genome locationscaffold359:239571..239990
RNA-Seq ExpressionMS002858
SyntenyMS002858
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8518468.1 hypothetical protein F0562_015942 [Nyssa sinensis]1.9e-1546.27Show/hide
Query:  IDFDIEQHGSNIVILAQSPCKLRRHRHGVAIQERGPNNDVVMALVRRRQHGGERDLLAAVGGVDIHFLVVNANAAVRVAGRDGDLHRGGDGDRRDGGDVE
        ID D +  G+  ++LA+    +RRHRH  +  E  PN DV +ALV R   G   DLL AV  VD+ F+VV+A+  VRV   DGDL  G  G+   GGDVE
Subjt:  IDFDIEQHGSNIVILAQSPCKLRRHRHGVAIQERGPNNDVVMALVRRRQHGGERDLLAAVGGVDIHFLVVNANAAVRVAGRDGDLHRGGDGDRRDGGDVE

Query:  GEDSDVLEDEARLGRAEDGPYEEDHDSDEEDDGE
        GED  VL+DEA     EDGP +ED + ++E D +
Subjt:  GEDSDVLEDEARLGRAEDGPYEEDHDSDEEDDGE

KZM99200.1 hypothetical protein DCAR_013438 [Daucus carota subsp. sativus]9.5e-1547.83Show/hide
Query:  IDFDIEQHGSNIVILAQSPCKLRRHRHGVAIQERGPNNDVVMALVRRRQHGGERDLLAAVGGVDIHFLVVNANAAVRVAGRDGDLHRGGDGDRRDGGDVE
        I  D +Q+    ++LAQ    +RRHR   A+ +R P+  V +ALV     G   DLLA VGG D+  +VV+++ AV V+G DGDL  GG+ +  DGGDVE
Subjt:  IDFDIEQHGSNIVILAQSPCKLRRHRHGVAIQERGPNNDVVMALVRRRQHGGERDLLAAVGGVDIHFLVVNANAAVRVAGRDGDLHRGGDGDRRDGGDVE

Query:  GEDSDVLEDEARLGRAEDGP-YEEDHDSDEEDDGEDGA
        G D  VLE EA L   E+GP  EE  ++DEEDD EDGA
Subjt:  GEDSDVLEDEARLGRAEDGP-YEEDHDSDEEDDGEDGA

KZV48980.1 hypothetical protein F511_09576 [Dorcoceras hygrometricum]9.1e-1846.76Show/hide
Query:  IDFDIEQHGSNIVILAQSPCKLRRHRHGVAIQERGPNNDVVMALVRRRQHGGERDLLAAVGGVDIHFLVVNANAAVRVAGRDGDLHRGGDGDRRDGGDVE
        ++FD   H +  ++LA+    +RRHR GVA+ ERGP+  V++AL+  R  G  RDLL  VGGV++H +VV+A+  VRVAG DGDLH G D  R  GGD+E
Subjt:  IDFDIEQHGSNIVILAQSPCKLRRHRHGVAIQERGPNNDVVMALVRRRQHGGERDLLAAVGGVDIHFLVVNANAAVRVAGRDGDLHRGGDGDRRDGGDVE

Query:  GEDSDVLEDEARLGRAEDGPYEEDHD-SDEEDDGEDGAG
         ED  VLEDE      +D   EED D   +E+ G++  G
Subjt:  GEDSDVLEDEARLGRAEDGPYEEDHD-SDEEDDGEDGAG

RXH76386.1 hypothetical protein DVH24_019274 [Malus domestica]3.8e-1648.15Show/hide
Query:  IDFDIEQHGSNIVILAQSPCKLRRHRHGVAIQERGPNNDVVMALVRRRQHGGERDLLAAVGGVDIHFLVVNANAAVRVAGRDGDLHRGGDGDRRDGGDVE
        +  D +++   I++L QS   +R      A+ ER P+ DV++ALV RR    ERDLL  VG VD+  +VV+A+  VRV+G DGDL  GG+     GG VE
Subjt:  IDFDIEQHGSNIVILAQSPCKLRRHRHGVAIQERGPNNDVVMALVRRRQHGGERDLLAAVGGVDIHFLVVNANAAVRVAGRDGDLHRGGDGDRRDGGDVE

Query:  GEDSDVLEDEARLGRAEDGPYEEDHDSDEEDDGED
         ED DVLEDEA LG  EDGP++E  D D+ED+ ED
Subjt:  GEDSDVLEDEARLGRAEDGPYEEDHDSDEEDDGED

RXH81415.1 hypothetical protein DVH24_034836 [Malus domestica]8.6e-1650Show/hide
Query:  DIEQHGSNIVILAQSPCKLRRHRHGVAIQERGPNNDVVMALVRRRQHGGERDLLAAVGGVDIHFLVVNANAAVRVAGRDGDLHRGGDGDRRDGGDVEGED
        D  ++   I++L +S   +R      A+ +R P+ DV++ALV RR    ERDLL  V GVD+  +VV+A   VRV+G DGDL  GG+ D  DGG VE ED
Subjt:  DIEQHGSNIVILAQSPCKLRRHRHGVAIQERGPNNDVVMALVRRRQHGGERDLLAAVGGVDIHFLVVNANAAVRVAGRDGDLHRGGDGDRRDGGDVEGED

Query:  SDVLEDEARLGRAEDGPYEEDHDSDEEDDGED
        SDVLEDEA LGR ED P++E  + DEED+ ED
Subjt:  SDVLEDEARLGRAEDGPYEEDHDSDEEDDGED

TrEMBL top hitse value%identityAlignment
A0A0A0LE53 Uncharacterized protein1.3e-1747.45Show/hide
Query:  LPIDFDIEQHGSNIVILAQSPCKLRRHRHGVAIQERGPNNDVVMALVRRRQHGGERDLLAAVGGVDIHFLVVNANAAVRVAGRDGDLHRGGDGDRRDGGD
        L ++FD E   S + +L Q      R RHG A  ERGP  DV+MALV  R  G E DLL +V GVD+ F+VV++++AV VAG + +   GG+ +  DGG 
Subjt:  LPIDFDIEQHGSNIVILAQSPCKLRRHRHGVAIQERGPNNDVVMALVRRRQHGGERDLLAAVGGVDIHFLVVNANAAVRVAGRDGDLHRGGDGDRRDGGD

Query:  VEGEDSDVLEDEARLGRAEDGPYEEDHDSDEEDDGED
        VEG D DVL++E+  G  EDGP +ED + DEED+  D
Subjt:  VEGEDSDVLEDEARLGRAEDGPYEEDHDSDEEDDGED

A0A2Z7CPJ5 Uncharacterized protein4.4e-1846.76Show/hide
Query:  IDFDIEQHGSNIVILAQSPCKLRRHRHGVAIQERGPNNDVVMALVRRRQHGGERDLLAAVGGVDIHFLVVNANAAVRVAGRDGDLHRGGDGDRRDGGDVE
        ++FD   H +  ++LA+    +RRHR GVA+ ERGP+  V++AL+  R  G  RDLL  VGGV++H +VV+A+  VRVAG DGDLH G D  R  GGD+E
Subjt:  IDFDIEQHGSNIVILAQSPCKLRRHRHGVAIQERGPNNDVVMALVRRRQHGGERDLLAAVGGVDIHFLVVNANAAVRVAGRDGDLHRGGDGDRRDGGDVE

Query:  GEDSDVLEDEARLGRAEDGPYEEDHD-SDEEDDGEDGAG
         ED  VLEDE      +D   EED D   +E+ G++  G
Subjt:  GEDSDVLEDEARLGRAEDGPYEEDHD-SDEEDDGEDGAG

A0A498HYB9 Uncharacterized protein1.9e-1648.15Show/hide
Query:  IDFDIEQHGSNIVILAQSPCKLRRHRHGVAIQERGPNNDVVMALVRRRQHGGERDLLAAVGGVDIHFLVVNANAAVRVAGRDGDLHRGGDGDRRDGGDVE
        +  D +++   I++L QS   +R      A+ ER P+ DV++ALV RR    ERDLL  VG VD+  +VV+A+  VRV+G DGDL  GG+     GG VE
Subjt:  IDFDIEQHGSNIVILAQSPCKLRRHRHGVAIQERGPNNDVVMALVRRRQHGGERDLLAAVGGVDIHFLVVNANAAVRVAGRDGDLHRGGDGDRRDGGDVE

Query:  GEDSDVLEDEARLGRAEDGPYEEDHDSDEEDDGED
         ED DVLEDEA LG  EDGP++E  D D+ED+ ED
Subjt:  GEDSDVLEDEARLGRAEDGPYEEDHDSDEEDDGED

A0A498IH03 Uncharacterized protein4.1e-1650Show/hide
Query:  DIEQHGSNIVILAQSPCKLRRHRHGVAIQERGPNNDVVMALVRRRQHGGERDLLAAVGGVDIHFLVVNANAAVRVAGRDGDLHRGGDGDRRDGGDVEGED
        D  ++   I++L +S   +R      A+ +R P+ DV++ALV RR    ERDLL  V GVD+  +VV+A   VRV+G DGDL  GG+ D  DGG VE ED
Subjt:  DIEQHGSNIVILAQSPCKLRRHRHGVAIQERGPNNDVVMALVRRRQHGGERDLLAAVGGVDIHFLVVNANAAVRVAGRDGDLHRGGDGDRRDGGDVEGED

Query:  SDVLEDEARLGRAEDGPYEEDHDSDEEDDGED
        SDVLEDEA LGR ED P++E  + DEED+ ED
Subjt:  SDVLEDEARLGRAEDGPYEEDHDSDEEDDGED

A0A5J4ZLG7 Uncharacterized protein9.2e-1646.27Show/hide
Query:  IDFDIEQHGSNIVILAQSPCKLRRHRHGVAIQERGPNNDVVMALVRRRQHGGERDLLAAVGGVDIHFLVVNANAAVRVAGRDGDLHRGGDGDRRDGGDVE
        ID D +  G+  ++LA+    +RRHRH  +  E  PN DV +ALV R   G   DLL AV  VD+ F+VV+A+  VRV   DGDL  G  G+   GGDVE
Subjt:  IDFDIEQHGSNIVILAQSPCKLRRHRHGVAIQERGPNNDVVMALVRRRQHGGERDLLAAVGGVDIHFLVVNANAAVRVAGRDGDLHRGGDGDRRDGGDVE

Query:  GEDSDVLEDEARLGRAEDGPYEEDHDSDEEDDGE
        GED  VL+DEA     EDGP +ED + ++E D +
Subjt:  GEDSDVLEDEARLGRAEDGPYEEDHDSDEEDDGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGCCCATTGACTTTGATATTGAACAGCATGGCTCCAACATTGTTATCCTCGCTCAAAGCCCCTGCAAACTCCGGCGACACCGGCACGGCGTCGCCATACAAGAACGGGG
ACCAAACAACGACGTCGTTATGGCCTTGGTACGTCGGCGGCAGCACGGTGGGGAGCGTGACCTGCTGGCCGCGGTAGGCGGCGTAGACATCCATTTTCTGGTAGTAAACG
CCAATGCGGCTGTTAGGGTTGCGGGACGAGACGGTGATCTGCATCGTGGCGGAGATGGTGATCGGCGGGACGGCGGAGACGTTGAGGGCGAAGACAGTGACGTCTTGGAG
GATGAGGCGCGGCTTGGACGGGCGGAGGATGGCCCATATGAGGAAGATCACGACTCCGACGAGGAGGACGACGGTGAAGATGGCGCAGGC
mRNA sequenceShow/hide mRNA sequence
CTGCCCATTGACTTTGATATTGAACAGCATGGCTCCAACATTGTTATCCTCGCTCAAAGCCCCTGCAAACTCCGGCGACACCGGCACGGCGTCGCCATACAAGAACGGGG
ACCAAACAACGACGTCGTTATGGCCTTGGTACGTCGGCGGCAGCACGGTGGGGAGCGTGACCTGCTGGCCGCGGTAGGCGGCGTAGACATCCATTTTCTGGTAGTAAACG
CCAATGCGGCTGTTAGGGTTGCGGGACGAGACGGTGATCTGCATCGTGGCGGAGATGGTGATCGGCGGGACGGCGGAGACGTTGAGGGCGAAGACAGTGACGTCTTGGAG
GATGAGGCGCGGCTTGGACGGGCGGAGGATGGCCCATATGAGGAAGATCACGACTCCGACGAGGAGGACGACGGTGAAGATGGCGCAGGC
Protein sequenceShow/hide protein sequence
LPIDFDIEQHGSNIVILAQSPCKLRRHRHGVAIQERGPNNDVVMALVRRRQHGGERDLLAAVGGVDIHFLVVNANAAVRVAGRDGDLHRGGDGDRRDGGDVEGEDSDVLE
DEARLGRAEDGPYEEDHDSDEEDDGEDGAG