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MS002865 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002865
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein CLAVATA 3
Genome locationscaffold359:288156..288290
RNA-Seq ExpressionMS002865
SyntenyMS002865
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054350.1 protein CLAVATA 3 [Cucumis melo var. makuwa]2.3e-0764.71Show/hide
Query:  MLREMKKKMGVVAGG------PPEWDQLRRVPSGPDPLHHNGGTPKKPRTP
        M+ EMKK+M     G        EW+QLRRVPSGPDPLHHNGG+PKKPRTP
Subjt:  MLREMKKKMGVVAGG------PPEWDQLRRVPSGPDPLHHNGGTPKKPRTP

KAE8652825.1 hypothetical protein Csa_022700, partial [Cucumis sativus]2.1e-0868.63Show/hide
Query:  MLREMKKKM------GVVAGGPPEWDQLRRVPSGPDPLHHNGGTPKKPRTP
        ML EMKK+M      G   G   EW+QLRRVPSGPDPLHHNGG+PKKPRTP
Subjt:  MLREMKKKM------GVVAGGPPEWDQLRRVPSGPDPLHHNGGTPKKPRTP

KAG5566490.1 hypothetical protein RHGRI_002148 [Rhododendron griersonianum]1.3e-0569.44Show/hide
Query:  GVVAGGPPEWDQLRRVPSGPDPLHHNGGTPKKPRTP
        G    G   WDQLR VP+GPDPLHH+GG+PKKPRTP
Subjt:  GVVAGGPPEWDQLRRVPSGPDPLHHNGGTPKKPRTP

KAG6583691.1 hypothetical protein SDJN03_19623, partial [Cucurbita argyrosperma subsp. sororia]5.6e-0971.43Show/hide
Query:  MLREMKKKMGVVAG----GPPEWDQLRRVPSGPDPLHHNGGTPKKPRTP
        MLREM K++ V  G       EWDQLRRVPSGPDPLHHNGG+PKKPRTP
Subjt:  MLREMKKKMGVVAG----GPPEWDQLRRVPSGPDPLHHNGGTPKKPRTP

XP_038877536.1 protein CLAVATA 3 [Benincasa hispida]1.6e-0866.67Show/hide
Query:  MLREMKKKMGVVAGGPP------EWDQLRRVPSGPDPLHHNGGTPKKPRTP
        ML+EMKK+M     G        EW+QLRRVPSGPDPLHHNGG+PKKPRTP
Subjt:  MLREMKKKMGVVAGGPP------EWDQLRRVPSGPDPLHHNGGTPKKPRTP

TrEMBL top hitse value%identityAlignment
A0A072UL07 Transmembrane protein, putative1.5e-0485.19Show/hide
Query:  WDQLRRVPSGPDPLHHNGGTPKKPRTP
        WDQLR++PSGPDPLHHNGGTP KP TP
Subjt:  WDQLRRVPSGPDPLHHNGGTPKKPRTP

A0A1U8Q0C1 uncharacterized protein LOC1091143291.2e-0478.12Show/hide
Query:  GGPPEWDQLRRVPSGPDPLHHNGGTPKKPRTP
        G    WD LRRVPSGPDPLHHNGG+PKKP+TP
Subjt:  GGPPEWDQLRRVPSGPDPLHHNGGTPKKPRTP

A0A5A7UGG1 Protein CLAVATA 31.1e-0764.71Show/hide
Query:  MLREMKKKMGVVAGG------PPEWDQLRRVPSGPDPLHHNGGTPKKPRTP
        M+ EMKK+M     G        EW+QLRRVPSGPDPLHHNGG+PKKPRTP
Subjt:  MLREMKKKMGVVAGG------PPEWDQLRRVPSGPDPLHHNGGTPKKPRTP

A0A6I9U546 protein CLAVATA 31.2e-0460.87Show/hide
Query:  KKMGVVAGGP-------PEWDQLRRVPSGPDPLHHNGGTPKKPRTP
        K+MG+  G P       PE  +LRRVP+GPDPLHHNG  PKKPRTP
Subjt:  KKMGVVAGGP-------PEWDQLRRVPSGPDPLHHNGGTPKKPRTP

A0A6P3ZEB5 protein CLAVATA 31.2e-0485.71Show/hide
Query:  WD-QLRRVPSGPDPLHHNGGTPKKPRTP
        WD QLR+VPSGPDPLHHNG +PKKPRTP
Subjt:  WD-QLRRVPSGPDPLHHNGGTPKKPRTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAGAGAGATGAAGAAGAAGATGGGAGTTGTTGCCGGCGGGCCGCCGGAGTGGGACCAGCTGAGGAGGGTGCCGTCTGGGCCTGACCCATTGCACCACAACGGTGG
AACCCCTAAAAAGCCAAGAACTCCA
mRNA sequenceShow/hide mRNA sequence
ATGCTTAGAGAGATGAAGAAGAAGATGGGAGTTGTTGCCGGCGGGCCGCCGGAGTGGGACCAGCTGAGGAGGGTGCCGTCTGGGCCTGACCCATTGCACCACAACGGTGG
AACCCCTAAAAAGCCAAGAACTCCA
Protein sequenceShow/hide protein sequence
MLREMKKKMGVVAGGPPEWDQLRRVPSGPDPLHHNGGTPKKPRTP