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MS002867 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002867
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPhotosystem II reaction center protein I
Genome locationscaffold359:320351..320461
RNA-Seq ExpressionMS002867
SyntenyMS002867
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009539 - photosystem II reaction center (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003686 - Photosystem II PsbI
IPR037271 - Photosystem II PsbI superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2037607.1 hypothetical protein ES319_D03G086200v1 [Gossypium barbadense]3.1e-0583.78Show/hide
Query:  DCVMLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR
        DCVMLTLKLFVYTVVIF+VSLFI  FL ND RRNP R
Subjt:  DCVMLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR

KAB2037665.1 hypothetical protein ES319_D03G092000v1 [Gossypium barbadense]3.1e-0583.78Show/hide
Query:  DCVMLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR
        DCVMLTLKLFVYTVVIF+VSLFI  FL ND RRNP R
Subjt:  DCVMLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR

TYG76217.1 hypothetical protein ES288_D03G096600v1 [Gossypium darwinii]3.1e-0581.08Show/hide
Query:  DCVMLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR
        DCVMLT+KLFVYTVVIF+VSLFI  FL NDL RNP R
Subjt:  DCVMLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR

TYG95339.1 hypothetical protein ES288_A11G260200v1 [Gossypium darwinii]3.1e-0583.78Show/hide
Query:  DCVMLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR
        DCVMLTLKLFVYTVVIF+VSLFI  FL ND  RNPRR
Subjt:  DCVMLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR

TYJ42623.1 hypothetical protein E1A91_A03G101000v1 [Gossypium mustelinum]1.8e-0583.78Show/hide
Query:  DCVMLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR
        DCVMLTLKLFVYTVVIF+VSLFI  FL ND  RNPRR
Subjt:  DCVMLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR

TrEMBL top hitse value%identityAlignment
A0A5D2D7B2 Uncharacterized protein1.5e-0583.78Show/hide
Query:  DCVMLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR
        DCVMLTLKLFVYTVVIF+VSLFI  FL ND RRNP R
Subjt:  DCVMLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR

A0A5D2EQE4 Uncharacterized protein1.5e-0583.78Show/hide
Query:  DCVMLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR
        DCVMLTLKLFVYTVVIF+VSLFI  FL ND  RNPRR
Subjt:  DCVMLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR

A0A5D2ZXF1 Uncharacterized protein8.7e-0683.78Show/hide
Query:  DCVMLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR
        DCVMLTLKLFVYTVVIF+VSLFI  FL ND  RNPRR
Subjt:  DCVMLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR

A0A5J5S2A4 Uncharacterized protein1.5e-0583.78Show/hide
Query:  DCVMLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR
        DCVMLTLKLFVYTVVIF+VSLFI  FL ND RRNP R
Subjt:  DCVMLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR

A0A5J5S2R2 Uncharacterized protein1.5e-0583.78Show/hide
Query:  DCVMLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR
        DCVMLTLKLFVYTVVIF+VSLFI  FL ND RRNP R
Subjt:  DCVMLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR

SwissProt top hitse value%identityAlignment
A7M950 Photosystem II reaction center protein I1.4e-0579.41Show/hide
Query:  MLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR
        M TLKLFVYTVVIF+VSLFI  FL ND RRNP R
Subjt:  MLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR

A8W3A8 Photosystem II reaction center protein I1.4e-0579.41Show/hide
Query:  MLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR
        M TLKLFVYTVVIF+VSLFI  FL ND RRNP R
Subjt:  MLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR

A9LYG9 Photosystem II reaction center protein I3.2e-0579.41Show/hide
Query:  MLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR
        MLTLKLFVYTVVIF+VSLFI  FL ND  RNP R
Subjt:  MLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR

Q19V93 Photosystem II reaction center protein I1.4e-0576.47Show/hide
Query:  MLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR
        MLTLK+FVYTVVIF+VSLFI  FL ND  RNP+R
Subjt:  MLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR

Q85CN1 Photosystem II reaction center protein I1.4e-0576.47Show/hide
Query:  MLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR
        MLTLKLFVYTVVIF+VSLF+  FL ND +RNP R
Subjt:  MLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR

Arabidopsis top hitse value%identityAlignment
ATCG00080.1 photosystem II reaction center protein I2.3e-0679.41Show/hide
Query:  MLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR
        MLTLKLFVYTVVIF+VSLFI  FL ND  RNP R
Subjt:  MLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATTGTGTAATGCTTACTCTCAAACTATTTGTTTATACGGTAGTAATATTCTATGTTTCTCTCTTCATTCTCGAATTCCTATATAATGACTTGAGACGTAATCCGAGACG
T
mRNA sequenceShow/hide mRNA sequence
GATTGTGTAATGCTTACTCTCAAACTATTTGTTTATACGGTAGTAATATTCTATGTTTCTCTCTTCATTCTCGAATTCCTATATAATGACTTGAGACGTAATCCGAGACG
T
Protein sequenceShow/hide protein sequence
DCVMLTLKLFVYTVVIFYVSLFILEFLYNDLRRNPRR