CuGenDBv2

Gene ID	MS002873
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Sodium/hydrogen exchanger
Genome location	scaffold359:374205..374487
RNA-Seq Expression	MS002873
Synteny	MS002873
Gene Ontology terms	GO:0006885 - regulation of pH (biological process) GO:0035725 - sodium ion transmembrane transport (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0015385 - sodium:proton antiporter activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0042377.1 sodium/hydrogen exchanger 6-like isoform X1 [Cucumis melo var. makuwa]

9.4e-26

95.38

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Query:  STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHSKNDL
        +TDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALN+NYLTPFFKSRSGDDEEDD+SKNDL
Subjt:  STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHSKNDL

TYK15496.1 sodium/hydrogen exchanger 6-like isoform X1 [Cucumis melo var. makuwa]

9.4e-26

95.38

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Query:  STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHSKNDL
        +TDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALN+NYLTPFFKSRSGDDEEDD+SKNDL
Subjt:  STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHSKNDL

XP_011654824.1 sodium/hydrogen exchanger 6 [Cucumis sativus]

2.6e-23

95.08

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Query:  STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHS
        +TDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALN+NYLTPFFKSRSGDDEEDD+S
Subjt:  STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHS

XP_022142428.1 sodium/hydrogen exchanger 6-like isoform X1 [Momordica charantia]

8.0e-25

100

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Query:  STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHS
        STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHS
Subjt:  STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHS

XP_022142429.1 sodium/hydrogen exchanger 6-like isoform X2 [Momordica charantia]

8.0e-25

100

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Query:  STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHS
        STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHS
Subjt:  STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LW39 Uncharacterized protein

4.6e-26

95.38

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Query:  STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHSKNDL
        +TDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALN+NYLTPFFKSRSGDDEEDD+SKNDL
Subjt:  STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHSKNDL

A0A5A7TKZ1 Sodium/hydrogen exchanger

4.6e-26

95.38

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Query:  STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHSKNDL
        +TDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALN+NYLTPFFKSRSGDDEEDD+SKNDL
Subjt:  STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHSKNDL

A0A5D3CYK0 Sodium/hydrogen exchanger 6-like isoform X1

4.6e-26

95.38

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Query:  STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHSKNDL
        +TDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALN+NYLTPFFKSRSGDDEEDD+SKNDL
Subjt:  STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHSKNDL

A0A6J1CLI4 Sodium/hydrogen exchanger

3.9e-25

100

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Query:  STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHS
        STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHS
Subjt:  STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHS

A0A6J1CN83 Sodium/hydrogen exchanger

3.9e-25

100

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Query:  STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHS
        STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHS
Subjt:  STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHS

SwissProt top hits

e value

%identity

Alignment

Q8RWU6 Sodium/hydrogen exchanger 6

7.8e-07

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Query:  YIAPYNDEGS-SRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEED
        Y+  Y+DE +   S  + KL+EFH+S ASFT L++NYLTPFF S +GD +++
Subjt:  YIAPYNDEGS-SRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEED

Q8S396 Sodium/hydrogen exchanger 5

2.2e-09

66.67

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Query:  DEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEED
        D  SS SR KMKLKEFH++T SFTAL+KN+LTPFF + SGD + D
Subjt:  DEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEED

Arabidopsis top hits

e value

%identity

Alignment

AT1G54370.1 sodium hydrogen exchanger 5

1.6e-10

66.67

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Query:  DEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEED
        D  SS SR KMKLKEFH++T SFTAL+KN+LTPFF + SGD + D
Subjt:  DEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEED

AT1G79610.1 Na+/H+ antiporter 6

5.5e-08

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Query:  YIAPYNDEGS-SRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEED
        Y+  Y+DE +   S  + KL+EFH+S ASFT L++NYLTPFF S +GD +++
Subjt:  YIAPYNDEGS-SRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEED

Sequences

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CDS sequence

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AGCACTGATGCTAGCAATGGCTACATTGCTCCTTATAATGATGAAGGGTCCTCAAGGAGCAGGATCAAAATGAAGCTTAAGGAGTTTCATGAGAGCACTGCATCATTTAC
AGCTTTGAATAAGAACTACCTGACCCCATTCTTTAAGAGTCGCAGTGGCGATGACGAGGAAGATGACCATAGTAAGAATGACTTG

mRNA sequence

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AGCACTGATGCTAGCAATGGCTACATTGCTCCTTATAATGATGAAGGGTCCTCAAGGAGCAGGATCAAAATGAAGCTTAAGGAGTTTCATGAGAGCACTGCATCATTTAC
AGCTTTGAATAAGAACTACCTGACCCCATTCTTTAAGAGTCGCAGTGGCGATGACGAGGAAGATGACCATAGTAAGAATGACTTG

Protein sequence

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STDASNGYIAPYNDEGSSRSRIKMKLKEFHESTASFTALNKNYLTPFFKSRSGDDEEDDHSKNDL

MS002873 (gene) of Bitter gourd (TR) v1 genome