; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002884 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002884
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionX-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like
Genome locationscaffold359:470910..471536
RNA-Seq ExpressionMS002884
SyntenyMS002884
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583719.1 hypothetical protein SDJN03_19651, partial [Cucurbita argyrosperma subsp. sororia]4.2e-3549.79Show/hide
Query:  DLDSSESLNLVGMCRTNWSSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFS--LFSLLNHALDRNYMFLLCNGILLLLATSPL-------
        ++DS ESL+L     T  S+ V+RLK MVKF+VS+CVF LV+ALF S FS+FPHS T+YFS  LFSLLNH ++R +MFL+CNGIL LLATS +       
Subjt:  DLDSSESLNLVGMCRTNWSSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFS--LFSLLNHALDRNYMFLLCNGILLLLATSPL-------

Query:  ------------QHSNSIPHHHYEL-----------REEEKEEEVEDDDDDTSAIHSADLAAVGPSSPIIEEEDDEGCFTYEVEEEEEEEEGKRSE----
                      S+S+ H  +E             +E +E+E E+ +D+    H              E+E+DEGCFT EVEEEEEEEE +  E    
Subjt:  ------------QHSNSIPHHHYEL-----------REEEKEEEVEDDDDDTSAIHSADLAAVGPSSPIIEEEDDEGCFTYEVEEEEEEEEGKRSE----

Query:  ELEVVVSTEELNKKIEEFIRKMKEEMRIQAAAAAQTQLVAV
        +LEVVVSTEELNKKIEEFIRKMKEEMRI+AA     QL+AV
Subjt:  ELEVVVSTEELNKKIEEFIRKMKEEMRIQAAAAAQTQLVAV

KAG7019366.1 hypothetical protein SDJN02_18326, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-3549.79Show/hide
Query:  QAQDLDSSESLNLVGMCRTNWSSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFS--LFSLLNHALDRNYMFLLCNGILLLLATSPL----
        +A ++DS ESL+L     T  S+ V+RLK MVKF+VS+CVF LV+ALF S FSLFPHS T+YFS  LFSLLNH ++R +MFL+CNGIL LLATS +    
Subjt:  QAQDLDSSESLNLVGMCRTNWSSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFS--LFSLLNHALDRNYMFLLCNGILLLLATSPL----

Query:  ---------------QHSNSIPHHHYEL-----------REEEKEEEVEDDDDDTSAIHSADLAAVGPSSPIIEEEDDEGCFTYEVEEEEEEEEGKRS--
                         S+S+ H  +E             +E +E+E ED+ +D       +           E+E+DEGCFT EVEEEEEEEE +    
Subjt:  ---------------QHSNSIPHHHYEL-----------REEEKEEEVEDDDDDTSAIHSADLAAVGPSSPIIEEEDDEGCFTYEVEEEEEEEEGKRS--

Query:  -EELEVVVSTEELNKKIEEFIRKMKEEMRIQAAAAAQTQLVAV
          +LEVVVSTEELNKKIEEFIRKMKEEMRI+AA     QL+AV
Subjt:  -EELEVVVSTEELNKKIEEFIRKMKEEMRIQAAAAAQTQLVAV

XP_022142572.1 nardilysin-like [Momordica charantia]1.2e-9897.61Show/hide
Query:  PQAQDLDSSESLNLVGMCRTNWSSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFSLFSLLNHALDRNYMFLLCNGILLLLATSPLQHSNS
        PQA+DLDSSESLNL GMCRTNWSSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHS TLYFSLFSLLNHALDRNYMFLLCNGILLLLATSPLQHSNS
Subjt:  PQAQDLDSSESLNLVGMCRTNWSSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFSLFSLLNHALDRNYMFLLCNGILLLLATSPLQHSNS

Query:  IPHHHYELREEEKEEEVEDDDDDTSAIHSADLAAVGPSSPIIEEEDDEGCFTYEVEEEEEEEEGKRSEELEVVVSTEELNKKIEEFIRKMKEEMRIQAAA
        IPHHHYELREEEKEEEVEDDDDDTSAIHSADLAAVGP+SPIIEEEDDEGCFT EVEEEEEEEEGKRSEELEVVVSTEELNKKIEEFIRKMKEEMRIQAAA
Subjt:  IPHHHYELREEEKEEEVEDDDDDTSAIHSADLAAVGPSSPIIEEEDDEGCFTYEVEEEEEEEEGKRSEELEVVVSTEELNKKIEEFIRKMKEEMRIQAAA

Query:  AAQTQLVAV
        AAQTQLVAV
Subjt:  AAQTQLVAV

XP_022927104.1 X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like [Cucurbita moschata]2.5e-3550.4Show/hide
Query:  QAQDLDSSESLNLVGMCRTNWSSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFS--LFSLLNHALDRNYMFLLCNGILLLLATSPL----
        +A ++DS ESL+L     TN  + V+RLK MVKF+VS+CVF LV+ALF S FSLFPHS T+YFS  LFSLLNH ++R +MFL+CNGIL LLATS +    
Subjt:  QAQDLDSSESLNLVGMCRTNWSSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFS--LFSLLNHALDRNYMFLLCNGILLLLATSPL----

Query:  ----------------QHSNSIPHHHY------------------ELREEEKEEEVEDDDDDTSAIHSADLAAVGPSSPIIEEEDDEGCFTYEVEEEEEE
                          S+S+ H  +                  E   EE E+E ED+ +D       D           E+E+DEGCFT EV EEEEE
Subjt:  ----------------QHSNSIPHHHY------------------ELREEEKEEEVEDDDDDTSAIHSADLAAVGPSSPIIEEEDDEGCFTYEVEEEEEE

Query:  EEGKRSEELEVVVSTEELNKKIEEFIRKMKEEMRIQAAAAAQTQLVAV
        EEGKR  +LEVVVSTEELNKKIEEFIRKMKEEMRI+AA     QL+AV
Subjt:  EEGKRSEELEVVVSTEELNKKIEEFIRKMKEEMRIQAAAAAQTQLVAV

XP_038877796.1 glutamic acid-rich protein-like [Benincasa hispida]1.3e-3651.22Show/hide
Query:  PQAQDLDSSESLNLV---GMCRT-----NWSSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFS--LFSLLNHALDRNYMFLLCNGILLLL
        P+A++LDS++SLNL       RT     N  SKV+ L  MVKF     VF LV+ALF S FSLFPHS ++YFS  +FSLLNHA++R YMFL+CNGIL LL
Subjt:  PQAQDLDSSESLNLV---GMCRT-----NWSSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFS--LFSLLNHALDRNYMFLLCNGILLLL

Query:  ATSPL---------------QHSNSIPHHHYELR------------EEEKEEEVEDDDDDTSAIHSADLAAVGPSSPIIEEEDDEGCFTYEVEEEEEEEE
        ATS +                +S+S  HHH++L             EE  ++  E+++++   IH  +L          E E+DEGCFT EVE+++EEEE
Subjt:  ATSPL---------------QHSNSIPHHHYELR------------EEEKEEEVEDDDDDTSAIHSADLAAVGPSSPIIEEEDDEGCFTYEVEEEEEEEE

Query:  GKRSEELEVVVSTEELNKKIEEFIRKMKEEMRIQAAAAAQTQLVAV
        GKR  ELEVVVSTEELNKKIEEFIRKMKEEMRI+   AAQTQL+AV
Subjt:  GKRSEELEVVVSTEELNKKIEEFIRKMKEEMRIQAAAAAQTQLVAV

TrEMBL top hitse value%identityAlignment
A0A0A0LVQ2 Uncharacterized protein7.3e-1746.52Show/hide
Query:  NWSSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFS--LFSLLNHALDRNYMFLLCN-GILLLLATSPLQHSNS---------IPH----H
        N SSKV+ LK MVK    + VFCL++ LF SLFSLFPHS ++YFS  LFS+L HA++R YMFL+CN GIL LLATS +  S+S          PH    H
Subjt:  NWSSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFS--LFSLLNHALDRNYMFLLCN-GILLLLATSPLQHSNS---------IPH----H

Query:  HYELREEEKEEEV----EDDDDDTSAIHSADLAAVGPSSPIIEE-EDDEGCFTYEVEEEEEEE-EGKRSEELEVVVSTEELNKKIEE
        H+ L E +    V    E D D T          +     + EE E+DEGCFT EVEEEEEEE EGK+  + E +  + E +++IE+
Subjt:  HYELREEEKEEEV----EDDDDDTSAIHSADLAAVGPSSPIIEE-EDDEGCFTYEVEEEEEEE-EGKRSEELEVVVSTEELNKKIEE

A0A6J1CN51 nardilysin-like5.8e-9997.61Show/hide
Query:  PQAQDLDSSESLNLVGMCRTNWSSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFSLFSLLNHALDRNYMFLLCNGILLLLATSPLQHSNS
        PQA+DLDSSESLNL GMCRTNWSSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHS TLYFSLFSLLNHALDRNYMFLLCNGILLLLATSPLQHSNS
Subjt:  PQAQDLDSSESLNLVGMCRTNWSSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFSLFSLLNHALDRNYMFLLCNGILLLLATSPLQHSNS

Query:  IPHHHYELREEEKEEEVEDDDDDTSAIHSADLAAVGPSSPIIEEEDDEGCFTYEVEEEEEEEEGKRSEELEVVVSTEELNKKIEEFIRKMKEEMRIQAAA
        IPHHHYELREEEKEEEVEDDDDDTSAIHSADLAAVGP+SPIIEEEDDEGCFT EVEEEEEEEEGKRSEELEVVVSTEELNKKIEEFIRKMKEEMRIQAAA
Subjt:  IPHHHYELREEEKEEEVEDDDDDTSAIHSADLAAVGPSSPIIEEEDDEGCFTYEVEEEEEEEEGKRSEELEVVVSTEELNKKIEEFIRKMKEEMRIQAAA

Query:  AAQTQLVAV
        AAQTQLVAV
Subjt:  AAQTQLVAV

A0A6J1EH25 X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like1.2e-3550.4Show/hide
Query:  QAQDLDSSESLNLVGMCRTNWSSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFS--LFSLLNHALDRNYMFLLCNGILLLLATSPL----
        +A ++DS ESL+L     TN  + V+RLK MVKF+VS+CVF LV+ALF S FSLFPHS T+YFS  LFSLLNH ++R +MFL+CNGIL LLATS +    
Subjt:  QAQDLDSSESLNLVGMCRTNWSSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFS--LFSLLNHALDRNYMFLLCNGILLLLATSPL----

Query:  ----------------QHSNSIPHHHY------------------ELREEEKEEEVEDDDDDTSAIHSADLAAVGPSSPIIEEEDDEGCFTYEVEEEEEE
                          S+S+ H  +                  E   EE E+E ED+ +D       D           E+E+DEGCFT EV EEEEE
Subjt:  ----------------QHSNSIPHHHY------------------ELREEEKEEEVEDDDDDTSAIHSADLAAVGPSSPIIEEEDDEGCFTYEVEEEEEE

Query:  EEGKRSEELEVVVSTEELNKKIEEFIRKMKEEMRIQAAAAAQTQLVAV
        EEGKR  +LEVVVSTEELNKKIEEFIRKMKEEMRI+AA     QL+AV
Subjt:  EEGKRSEELEVVVSTEELNKKIEEFIRKMKEEMRIQAAAAAQTQLVAV

A0A6P3ZZX9 glutamic acid-rich protein-like4.4e-1438.05Show/hide
Query:  VGMCRTNWSSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFS--LFSLLNHALDRNYMFLLCNGILLLLATSPLQHSNS------------
        V   +   +S +Q L+  ++  +SV +  L +  + S  SLFPHS ++YFS  LFS+   +L+R YMFL+CNGIL  LA S +  ++S            
Subjt:  VGMCRTNWSSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFS--LFSLLNHALDRNYMFLLCNGILLLLATSPLQHSNS------------

Query:  -IPHHHYELREEEKEEEVEDDDDD------------TSAIHSADLAAVGPSSPIIEEE--DDEGCFTYEV--EEEEEEEEGKRSEELEVVVSTEELNKKI
         +P  +    EEE+EEE ED+D+D             S   S +   V   +  +E E  ++EG ++  +  E EE+E EG  +    VV ST+ELNKK 
Subjt:  -IPHHHYELREEEKEEEVEDDDDD------------TSAIHSADLAAVGPSSPIIEEE--DDEGCFTYEV--EEEEEEEEGKRSEELEVVVSTEELNKKI

Query:  EEFIRKMKEEMRIQAAAAAQTQLVAV
        EEFIRKMKEE+RI+    AQ QL+AV
Subjt:  EEFIRKMKEEMRIQAAAAAQTQLVAV

B9IH27 Uncharacterized protein6.0e-1138.12Show/hide
Query:  LKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFS--LFSLLNHALDRNYMFLLCNGILLLLATSPLQHSNS-IPHHHYELREEEK------------
        L+  ++F++SV +F L +  F S FSLFP    LY +  +FS L+H L+R YMFL+CNGIL +LA S +  S +      Y L +E +            
Subjt:  LKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFS--LFSLLNHALDRNYMFLLCNGILLLLATSPLQHSNS-IPHHHYELREEEK------------

Query:  EEEVEDDDDDTSAIHSADLAAVGPSSPIIEEEDDEGCFTYEVEEEEEEEEGKR-------SEELEVVVSTEELNKKIEEFIRKMKEEMRIQAAAAAQTQL
        E  V+D +   +++ S +   +       EEE++       + EEEE  E KR        E  E + STEELN++IEEFIRKMKEE+RI+    AQ QL
Subjt:  EEEVEDDDDDTSAIHSADLAAVGPSSPIIEEEDDEGCFTYEVEEEEEEEEGKR-------SEELEVVVSTEELNKKIEEFIRKMKEEMRIQAAAAAQTQL

Query:  VA
        +A
Subjt:  VA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04515.1 unknown protein9.2e-0429.53Show/hide
Query:  SSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFSLFSLLNHALDRNYMFLLCNGILLLLATSPLQHSNSIPH-HHYELREEEKEEEVEDDD
        S K +R    +K V  +  F  + +  LS  SL   S      L ++ ++ +D+ YMFLLCNGI+  +  S   +S+S+ H     + E+ KE  ++   
Subjt:  SSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFSLFSLLNHALDRNYMFLLCNGILLLLATSPLQHSNSIPH-HHYELREEEKEEEVEDDD

Query:  DDTSAIHSADLAAVGPSSPIIEEEDDEGCFTYEVEEE----EEEEEGKRSEELEV---------------VVSTEELNKKIEEFIRKMKEEMR
         D        + A+   S + +EE+     + E EEE     +E+EG   ++L +               ++S+E+LNKK E+FIRKMK E+R
Subjt:  DDTSAIHSADLAAVGPSSPIIEEEDDEGCFTYEVEEE----EEEEEGKRSEELEV---------------VVSTEELNKKIEEFIRKMKEEMR

AT3G13130.1 unknown protein8.3e-0532.47Show/hide
Query:  KFVVSVCVFCLVVALFLSLFSLFPHSCTLYFSLFSLLNHALDRNYMFLLCNGILLLLA--------TSPLQH-----SNSIPHHHYELREEEKEEEVEDD
        +F+  +  F  V    LSL  L  H   LY  +  L+ HA+D+NYMFLLCNG+++++A        + P++        +  +  +E      E E + D
Subjt:  KFVVSVCVFCLVVALFLSLFSLFPHSCTLYFSLFSLLNHALDRNYMFLLCNGILLLLA--------TSPLQH-----SNSIPHHHYELREEEKEEEVEDD

Query:  DDDTSAIHSADLAAV------GPSSPIIEEEDDEGCFTYEVEEEE---------EEEEGKRSEELEVVVST-EELNKKIEEFIRKMKEEMRIQA
            +    A+   V        +    EE+DD+        EEE         EEEEG     + V+ ST EE+NKK +EFIRKMKEE+RI+A
Subjt:  DDDTSAIHSADLAAV------GPSSPIIEEEDDEGCFTYEVEEEE---------EEEEGKRSEELEVVVST-EELNKKIEEFIRKMKEEMRIQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCACAAGCCCAAGATTTGGATTCAAGTGAAAGTTTGAATCTTGTTGGGATGTGCAGAACAAATTGGAGCAGCAAAGTGCAGAGGTTGAAAGGGATGGTGAAGTTTGTAGT
GTCAGTTTGTGTGTTTTGTTTGGTTGTTGCCTTGTTTTTGTCCCTCTTCTCTCTCTTCCCCCATTCCTGCACTCTCTATTTCTCCCTCTTTTCTCTCCTCAACCATGCCT
TGGACAGAAACTACATGTTCTTGCTCTGCAATGGAATCCTCCTTCTCCTTGCCACCTCTCCTCTGCAACATTCTAATTCCATTCCCCACCATCACTATGAGCTTCGAGAA
GAAGAAAAAGAGGAGGAGGTGGAGGATGACGATGATGACACATCAGCAATTCATTCTGCTGACCTGGCAGCTGTGGGGCCCAGCAGCCCCATTATTGAAGAAGAAGATGA
TGAAGGGTGTTTTACATATGAGGTGGAAGAAGAGGAAGAAGAAGAAGAAGGGAAGAGGAGTGAAGAATTGGAGGTGGTGGTGAGTACAGAAGAGTTGAACAAGAAAATTG
AAGAGTTTATAAGGAAGATGAAGGAGGAAATGAGGATTCAAGCAGCAGCAGCAGCTCAAACTCAGCTTGTTGCAGTG
mRNA sequenceShow/hide mRNA sequence
CCACAAGCCCAAGATTTGGATTCAAGTGAAAGTTTGAATCTTGTTGGGATGTGCAGAACAAATTGGAGCAGCAAAGTGCAGAGGTTGAAAGGGATGGTGAAGTTTGTAGT
GTCAGTTTGTGTGTTTTGTTTGGTTGTTGCCTTGTTTTTGTCCCTCTTCTCTCTCTTCCCCCATTCCTGCACTCTCTATTTCTCCCTCTTTTCTCTCCTCAACCATGCCT
TGGACAGAAACTACATGTTCTTGCTCTGCAATGGAATCCTCCTTCTCCTTGCCACCTCTCCTCTGCAACATTCTAATTCCATTCCCCACCATCACTATGAGCTTCGAGAA
GAAGAAAAAGAGGAGGAGGTGGAGGATGACGATGATGACACATCAGCAATTCATTCTGCTGACCTGGCAGCTGTGGGGCCCAGCAGCCCCATTATTGAAGAAGAAGATGA
TGAAGGGTGTTTTACATATGAGGTGGAAGAAGAGGAAGAAGAAGAAGAAGGGAAGAGGAGTGAAGAATTGGAGGTGGTGGTGAGTACAGAAGAGTTGAACAAGAAAATTG
AAGAGTTTATAAGGAAGATGAAGGAGGAAATGAGGATTCAAGCAGCAGCAGCAGCTCAAACTCAGCTTGTTGCAGTG
Protein sequenceShow/hide protein sequence
PQAQDLDSSESLNLVGMCRTNWSSKVQRLKGMVKFVVSVCVFCLVVALFLSLFSLFPHSCTLYFSLFSLLNHALDRNYMFLLCNGILLLLATSPLQHSNSIPHHHYELRE
EEKEEEVEDDDDDTSAIHSADLAAVGPSSPIIEEEDDEGCFTYEVEEEEEEEEGKRSEELEVVVSTEELNKKIEEFIRKMKEEMRIQAAAAAQTQLVAV