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MS002890 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002890
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold359:495744..496028
RNA-Seq ExpressionMS002890
SyntenyMS002890
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042343.1 hypothetical protein E6C27_scaffold795G00410 [Cucumis melo var. makuwa]5.2e-3382.11Show/hide
Query:  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSFPVGIEVHGVRAGEGILDYVAGRPEYPENQYRYQ
        MDIQ K+LQH+DQITVVAAVSVV+SLFVY APRFLSILAFFWPLF STAVLLV M AFGG F VG E+HG+RAGEGILDYVAGRPE  EN Y+YQ
Subjt:  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSFPVGIEVHGVRAGEGILDYVAGRPEYPENQYRYQ

KAG6573520.1 hypothetical protein SDJN03_27407, partial [Cucurbita argyrosperma subsp. sororia]8.9e-3384.95Show/hide
Query:  IQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSFPVGIEVHGVRAGEGILDYVAGRPEYPENQYRYQ
        IQTKVLQH+DQ+TVVAAVSVV+SLFVYAAPRFLSILAFFWPLF+STAVLLVAM AFGG F VG EVHG +AGE ILDYVAGRPEY E QY+YQ
Subjt:  IQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSFPVGIEVHGVRAGEGILDYVAGRPEYPENQYRYQ

KAG6583721.1 hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sororia]2.4e-2269.07Show/hide
Query:  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMI-AFGGSFPVGIEVHGVR-AGEGILDYVAGRPEYPENQYRYQ
        MD+QTKVLQ++DQITVVAAVSVV+SLF          LAFFWPLF STA LLV MI AF G F VG ++HGVR AGEGILDYVAGRPEY +N Y+Y+
Subjt:  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMI-AFGGSFPVGIEVHGVR-AGEGILDYVAGRPEYPENQYRYQ

KAG7012637.1 hypothetical protein SDJN02_25389, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-3386.02Show/hide
Query:  IQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSFPVGIEVHGVRAGEGILDYVAGRPEYPENQYRYQ
        IQTKVLQH+DQ+TVVAAVSVV+SLFVYAAPRFLSILAFFWPLF+STAVLLVAM AFGG F VG EVHG RAGE ILDYVAGRPEY E QY+YQ
Subjt:  IQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSFPVGIEVHGVRAGEGILDYVAGRPEYPENQYRYQ

KGN64996.1 hypothetical protein Csa_022896 [Cucumis sativus]6.8e-3382.11Show/hide
Query:  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSFPVGIEVHGVRAGEGILDYVAGRPEYPENQYRYQ
        MDI  KVLQH+DQ+TVVAAVSVV+SLFVYAAPRFLSILAFFWPLF STAVLLV M AFGG F VG E+HG+RAGEGILDYVAGRPE  EN Y+YQ
Subjt:  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSFPVGIEVHGVRAGEGILDYVAGRPEYPENQYRYQ

TrEMBL top hitse value%identityAlignment
A0A0A0LYI8 Uncharacterized protein3.3e-3382.11Show/hide
Query:  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSFPVGIEVHGVRAGEGILDYVAGRPEYPENQYRYQ
        MDI  KVLQH+DQ+TVVAAVSVV+SLFVYAAPRFLSILAFFWPLF STAVLLV M AFGG F VG E+HG+RAGEGILDYVAGRPE  EN Y+YQ
Subjt:  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSFPVGIEVHGVRAGEGILDYVAGRPEYPENQYRYQ

A0A2N9EZM9 Uncharacterized protein1.8e-1858.62Show/hide
Query:  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSFPVGIEVHGVRAGEGILDYVAGRPEY
        MDI  K+LQ+R  +T+ A V +V+SL +YAAPR ++ILAFFWPLF STAVLL+A++AFGG      E HG +AG+GIL+YV G+PE+
Subjt:  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSFPVGIEVHGVRAGEGILDYVAGRPEY

A0A396J444 Uncharacterized protein5.1e-1854.74Show/hide
Query:  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSFPVGIEVHGVRAGEGILDYVAGRPEY-PENQYRY
        M +  K+L++R QIT+   +S+V SL +Y AP FL++LA+FWPLF ST V LVA+IAFGG      E HG +AGEG+LDYVAG+PE+  E+QY +
Subjt:  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSFPVGIEVHGVRAGEGILDYVAGRPEY-PENQYRY

A0A5D3CU44 Uncharacterized protein2.5e-3382.11Show/hide
Query:  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSFPVGIEVHGVRAGEGILDYVAGRPEYPENQYRYQ
        MDIQ K+LQH+DQITVVAAVSVV+SLFVY APRFLSILAFFWPLF STAVLLV M AFGG F VG E+HG+RAGEGILDYVAGRPE  EN Y+YQ
Subjt:  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSFPVGIEVHGVRAGEGILDYVAGRPEYPENQYRYQ

D7T5G5 Uncharacterized protein5.1e-1856.98Show/hide
Query:  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSFPVGIEVHGVRAGEGILDYVAGRPE
        M+IQTK++Q++    +   VS++++L    APRFL+ILA+FWPLFVSTAVLL+ MI FG   P   E+HG + GEG+LDYVAGRPE
Subjt:  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSFPVGIEVHGVRAGEGILDYVAGRPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13175.1 unknown protein2.6e-0638.46Show/hide
Query:  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFG--GSFPVGI-----EVHGVR-AGEGILDYVAG
        M+ + K+L+ + QI     +S++    V  +P FL++L++FWPLF+STA+ L A+  F      PV       E  G++ A EGILDYV G
Subjt:  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFG--GSFPVGI-----EVHGVR-AGEGILDYVAG

AT4G16400.1 unknown protein1.2e-1450Show/hide
Query:  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSFPVGIEVHGVRAGEGILDYVAGRPE
        M+IQ K++++R    V   VSV+++  VYAAPR L+ILA+FWPLF STA  L   I FGG   +  E      GE ++DYVAGRPE
Subjt:  MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSFPVGIEVHGVRAGEGILDYVAGRPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATTCAAACAAAGGTTCTCCAACACAGAGACCAAATAACTGTTGTAGCAGCAGTTTCTGTGGTTATATCATTGTTTGTATATGCAGCCCCGCGGTTCCTAAGCAT
TCTAGCATTCTTTTGGCCACTCTTTGTCTCCACAGCCGTACTCTTGGTGGCAATGATTGCCTTTGGAGGCAGTTTCCCAGTTGGAATTGAAGTTCACGGTGTAAGGGCGG
GTGAAGGGATTCTAGATTATGTTGCAGGACGGCCTGAATATCCTGAAAACCAATATAGGTACCAA
mRNA sequenceShow/hide mRNA sequence
ATGGACATTCAAACAAAGGTTCTCCAACACAGAGACCAAATAACTGTTGTAGCAGCAGTTTCTGTGGTTATATCATTGTTTGTATATGCAGCCCCGCGGTTCCTAAGCAT
TCTAGCATTCTTTTGGCCACTCTTTGTCTCCACAGCCGTACTCTTGGTGGCAATGATTGCCTTTGGAGGCAGTTTCCCAGTTGGAATTGAAGTTCACGGTGTAAGGGCGG
GTGAAGGGATTCTAGATTATGTTGCAGGACGGCCTGAATATCCTGAAAACCAATATAGGTACCAA
Protein sequenceShow/hide protein sequence
MDIQTKVLQHRDQITVVAAVSVVISLFVYAAPRFLSILAFFWPLFVSTAVLLVAMIAFGGSFPVGIEVHGVRAGEGILDYVAGRPEYPENQYRYQ