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MS002894 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002894
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDeubiquitinating enzyme MINDY-3
Genome locationscaffold359:509667..509777
RNA-Seq ExpressionMS002894
SyntenyMS002894
Gene Ontology termsGO:0071108 - protein K48-linked deubiquitination (biological process)
GO:0004843 - thiol-dependent ubiquitin-specific protease activity (molecular function)
GO:1990380 - Lys48-specific deubiquitinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607675.1 Ubiquitin carboxyl-terminal hydrolase MINDY-3, partial [Cucurbita argyrosperma subsp. sororia]8.9e-0581.08Show/hide
Query:  IGSASKSVKKEKEFSGKDVNSGKELSESEANWLFSMV
        +GSASKSVKKEKEFS KDVN GK++ ESEAN LFSMV
Subjt:  IGSASKSVKKEKEFSGKDVNSGKELSESEANWLFSMV
KAG7037268.1 hypothetical protein SDJN02_00891 [Cucurbita argyrosperma subsp. argyrosperma]8.9e-0581.08Show/hide
Query:  IGSASKSVKKEKEFSGKDVNSGKELSESEANWLFSMV
        +GSASKSVKKEKEFS KDVN GK++ ESEAN LFSMV
Subjt:  IGSASKSVKKEKEFSGKDVNSGKELSESEANWLFSMV
XP_022926237.1 ubiquitin carboxyl-terminal hydrolase MINDY-3 [Cucurbita moschata]8.9e-0581.08Show/hide
Query:  IGSASKSVKKEKEFSGKDVNSGKELSESEANWLFSMV
        +GSASKSVKKEKEFS KDVN GK++ ESEAN LFSMV
Subjt:  IGSASKSVKKEKEFSGKDVNSGKELSESEANWLFSMV
XP_022981420.1 ubiquitin carboxyl-terminal hydrolase MINDY-3 [Cucurbita maxima]2.6e-0478.38Show/hide
Query:  IGSASKSVKKEKEFSGKDVNSGKELSESEANWLFSMV
        +GSASKSVKKEKEF  KDVN GK++ ESEAN LFSMV
Subjt:  IGSASKSVKKEKEFSGKDVNSGKELSESEANWLFSMV
XP_023523420.1 ubiquitin carboxyl-terminal hydrolase MINDY-3 [Cucurbita pepo subsp. pepo]8.9e-0581.08Show/hide
Query:  IGSASKSVKKEKEFSGKDVNSGKELSESEANWLFSMV
        +GSASKSVKKEKEFS KDVN GK++ ESEAN LFSMV
Subjt:  IGSASKSVKKEKEFSGKDVNSGKELSESEANWLFSMV
TrEMBL top hitse value%identityAlignment
A0A1S3CG70 Deubiquitinating enzyme MINDY-36.2e-0475.68Show/hide
Query:  IGSASKSVKKEKEFSGKDVNSGKELSESEANWLFSMV
        +GS+SKSVKK K+FS KD N GKELSE+EAN LFSMV
Subjt:  IGSASKSVKKEKEFSGKDVNSGKELSESEANWLFSMV
A0A5A7UBJ2 Protein FAM188A6.2e-0475.68Show/hide
Query:  IGSASKSVKKEKEFSGKDVNSGKELSESEANWLFSMV
        +GS+SKSVKK K+FS KD N GKELSE+EAN LFSMV
Subjt:  IGSASKSVKKEKEFSGKDVNSGKELSESEANWLFSMV
A0A6J1DJQ8 Deubiquitinating enzyme MINDY-31.3e-0481.08Show/hide
Query:  IGSASKSVKKEKEFSGKDVNSGKELSESEANWLFSMV
        +GSASKS KK+KEFS KDVN GKEL ESEAN LFSMV
Subjt:  IGSASKSVKKEKEFSGKDVNSGKELSESEANWLFSMV
A0A6J1EE00 Deubiquitinating enzyme MINDY-34.3e-0581.08Show/hide
Query:  IGSASKSVKKEKEFSGKDVNSGKELSESEANWLFSMV
        +GSASKSVKKEKEFS KDVN GK++ ESEAN LFSMV
Subjt:  IGSASKSVKKEKEFSGKDVNSGKELSESEANWLFSMV
A0A6J1IZG3 Deubiquitinating enzyme MINDY-31.3e-0478.38Show/hide
Query:  IGSASKSVKKEKEFSGKDVNSGKELSESEANWLFSMV
        +GSASKSVKKEKEF  KDVN GK++ ESEAN LFSMV
Subjt:  IGSASKSVKKEKEFSGKDVNSGKELSESEANWLFSMV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTGGTTCTGCATCAAAGTCGGTGAAGAAAGAGAAGGAGTTTAGTGGAAAGGATGTGAATTCGGGGAAGGAATTGTCGGAGAGTGAAGCGAACTGGTTGTTTTCAATGGT
C
mRNA sequenceShow/hide mRNA sequence
ATTGGTTCTGCATCAAAGTCGGTGAAGAAAGAGAAGGAGTTTAGTGGAAAGGATGTGAATTCGGGGAAGGAATTGTCGGAGAGTGAAGCGAACTGGTTGTTTTCAATGGT
C
Protein sequenceShow/hide protein sequence
IGSASKSVKKEKEFSGKDVNSGKELSESEANWLFSMV